/** Called from bicat.gui.window.Search */
public void search(int data, int list, int idx, String genes, String chips, boolean andSearch) {
if (engine.isDebug()) System.out.println("Starting search ...");
Dataset BcR = (Dataset) engine.getDatasetList().get(data);
LinkedList biclusterList = (LinkedList) BcR.getBCsList(list).get(idx);
biclusterList = search(biclusterList, genes, chips, andSearch);
// do management ...
BcR.updateSearchBiclustersLists(biclusterList, list, idx);
if (owner != null) {
owner.updateSearchMenu();
owner.buildTree();
owner.getTree().setSelectionPath(owner.getPreprocessedPath());
owner.getTree().setSelectionPath(owner.getPreprocessedPath());
int row = owner.getTree().getRowCount() - 1;
while (row >= 0) {
owner.getTree().collapseRow(row);
row--;
}
}
}
