@Override
public List<GeneRank> listByGeneId(Integer geneId) {
SmartDBObject query = new SmartDBObject("geneId", geneId);
query.put("mixturePerc", new BasicDBObject("$lte", 0.01));
query.addReturnFields("sampleId", "tss5kRank", "source", "etype");
return super.find(query);
}
private SmartDBObject buildQueryByCriteria(GeneRankCriteria criteria) {
Integer geneId = criteria.getGeneId();
SmartDBObject query = new SmartDBObject();
if (null != criteria.getSampleId()) {
query.put("sampleId", criteria.getSampleId());
}
if (null != geneId) {
query.put("geneId", geneId);
}
if (CollectionUtils.isNotEmpty(criteria.getSourceList())) {
query =
MongodbHelper.and(query, MongodbHelper.in("source", criteria.getSourceList().toArray()));
}
if (CollectionUtils.isNotEmpty(criteria.getEtypeList())) {
query =
MongodbHelper.and(query, MongodbHelper.in("etype", criteria.getEtypeList().toArray()));
}
if (null != criteria.getMixturePerc()) {
query.put("mixturePerc", new BasicDBObject("$lte", 0.01));
}
return query;
}
