@Override
public List<Double> percentile(GeneRankCriteria criteria) {
SmartDBObject query = buildQueryByCriteria(criteria);
SortType sortType = SortType.ASC;
query.addReturnFields("mixturePerc");
query.addSort("mixturePerc", sortType);
return super.find(query, Double.class);
}
@Override
public List<Integer> listRankByCriteria(GeneRankCriteria criteria, String field) {
SmartDBObject query = buildQueryByCriteria(criteria);
field = null == field ? "TSS5K" : field.toUpperCase();
SortType sortType = SortType.ASC;
String _field =
"TSSTES".equals(field) ? "tssTesRank" : "TSS5K".equals(field) ? "tss5kRank" : "tssT5Rank";
query.addReturnFields(_field);
query.addSort(_field, sortType);
return super.find(query, Integer.class);
}
/*
* (non-Javadoc)
*
* @see
* com.omicseq.store.dao.IGeneRankDAO#findByCriteria(com.omicseq.store.dao
* .IGeneRankDAO.GeneRankCriteria, java.lang.Integer, java.lang.Integer)
*/
@Override
public List<GeneRank> findByCriteria(GeneRankCriteria criteria, Integer start, Integer limit) {
SmartDBObject query = buildQueryByCriteria(criteria);
SortType sortType = criteria.getSortType();
if (sortType == null) {
sortType = SortType.ASC;
}
query.addSort("mixturePerc", sortType);
// query.addSort("etype", SortType.ASC);
// query.addSort("tssTesCount", SortType.DESC);
// List<BasicDBObject> sortList = new ArrayList<BasicDBObject>();
// BasicDBObject sortObject = new SmartDBObject("mixturePerc", 1);
// sortObject.append("tssTesCount", -1);
// sortObject.append("etype", 1);
// sortList.add(sortObject);
// query.setSortList(sortList);
return super.find(query, start, limit);
}
