private void printVals(double[] vals1, double[] vals2, String symbol) { try { BufferedWriter writer = new BufferedWriter(new FileWriter("/home/ozgun/Desktop/temp.txt")); writer.write("Ras-mutated\tBRAF-mutated\n"); for (int i = 0; i < Math.max(vals1.length, vals2.length); i++) { if (i < vals1.length) writer.write(vals1[i] + ""); writer.write("\t"); if (i < vals2.length) writer.write(vals2[i] + ""); writer.write("\n"); } writer.close(); } catch (IOException e) { e.printStackTrace(); } }
private void writeTree(GeneBranch tree, String dir) { try { BufferedWriter writer1 = new BufferedWriter(new FileWriter(dir + tree.gene + ".sif")); BufferedWriter writer2 = new BufferedWriter(new FileWriter(dir + tree.gene + ".format")); writer2.write("graph\tgrouping\ton\n"); writer2.write("node\t" + tree.gene + "\tcolor\t255 255 200\n"); writeBranches(tree.gene, tree, writer1, writer2); writer1.close(); writer2.close(); } catch (IOException e) { e.printStackTrace(); System.exit(1); } }