/** initialize tertiary structure view */
private void initTertiaryView() {
Group models3D = new Group();
rnaSequence3D = new RNASequence(model.getPdbfile());
if (tertiaryRoom == null) {
tertiaryRoom = new Room(models3D, 50, 50);
tertiaryRoom.rotateCamera(tertiaryRoom);
tertiaryRoom.scaleCamera(scene);
tertiaryRoom.alignToParent(pane3D);
tertiaryRoom.setPickOnBounds(false);
pane3D.getChildren().add(tertiaryRoom);
} else {
tertiaryRoom.setObject(rnaSequence3D);
}
if (reloadItem.isSelected()) loadOneModel(0);
if (!reloadItem.isSelected()) loadAllmodels();
((MeshModel) rnaSequence3D.getModels().get(1)).colorPyrPur();
rnaSequence3D.setSelectionModel(selectionModel);
tertiaryRoom.setCameraCenter(rnaSequence3D.computeCenter());
activateRightSideButtons();
}
