// Shuffles Arraylist like a deck of cards
private static ArrayList<Restaurant> shuffle(ArrayList<Restaurant> places) {
int j = 0;
Restaurant temp = null;
// Randomly swaps one index with another
for (int i = 0; i < places.size(); i++) {
j = ThreadLocalRandom.current().nextInt(0, i + 1);
temp = places.get(j);
places.set(j, places.get(i));
places.set(i, temp);
}
return places;
}
/**
* React to the pushing of the given button
*
* @param index The number of the button pushed
*/
private void slide(int index) {
// Don't do anything if the puzzle is solved
if (solved) return;
// if not a valid click return
if (!check(index)) {
return;
}
// swap positions
current.set(index, current.set(hiddenIndex, current.get(index)));
// swap strings
JButton b = (JButton) buttons.get(index);
b.setText((String) current.get(index));
b.setIcon(icons[Integer.parseInt(current.get(index)) - 1]);
b.setVisible(false);
b = (JButton) buttons.get(hiddenIndex);
b.setText((String) current.get(hiddenIndex));
b.setIcon(icons[Integer.parseInt(current.get(hiddenIndex)) - 1]);
b.setVisible(true);
// update the position of the blanked spot
hiddenIndex = index;
// Increment the number of moves and update status
moves++;
getStatusLabel().setText("Number of moves: " + moves);
// if you've won
if (current.equals(correct)) {
solved = true;
getStatusLabel().setText("Solved the game in " + moves + " moves.");
// Change the buttons colors to green
Iterator itr = buttons.iterator();
while (itr.hasNext()) {
((JButton) itr.next()).setBackground(java.awt.Color.green);
}
}
}
private ArrayList<Integer> findRanges() {
int rowsPerRange = (int) Math.ceil((grid.size()) / (double) threads);
ArrayList<Integer> ranges = new ArrayList<Integer>();
int startRow = 0, endRow = rowsPerRange;
for (int i = 0; i < threads; i++) {
ranges.add(startRow);
ranges.add(endRow);
startRow = endRow;
;
endRow += rowsPerRange;
}
ranges.set(ranges.size() - 1, Math.min(grid.size(), ranges.get(ranges.size() - 1)));
System.out.println(ranges);
return ranges;
}
/*
* this method return a new file that contain the new format of the protein sequence.
*/
private void CreatedTranslatedText(Reader rd) {
ArrayList<String> allData = new ArrayList<String>();
Scanner scanner = new Scanner(rd);
while (scanner.hasNext()) {
allData.add(scanner.next());
}
ArrayList<String> ID = new ArrayList<String>();
String key = "*";
for (int i = 0; i < allData.size(); i++) {
if (i % 8 == 0) {
key = allData.get(i);
if (ID.contains(key) != true) {
ID.add(key);
ID.add("*");
ID.add(allData.get(i + 1));
} else {
}
} else {
}
}
/*
* i want to use array here, because i can actually know the number of elements that store
* in the array,but the type of the elements is String.if i want to do so,i must create a
* new class that contain ID.but here i just use arraylist.
*/
for (int i = 0; i < ID.size() / 3; i++) {
for (int j = 0; j < allData.size() / 8; j++) {
if (ID.get(3 * i).equals(allData.get(8 * j))) {
ID.set(3 * i + 1, ID.get(3 * i + 1) + ";" + allData.get(8 * j + 2));
}
}
}
try {
PrintWriter wr = new PrintWriter(new FileWriter("FASTA-R.elm"));
for (int i = 0; i < ID.size() / 3; i++) {
wr.println(ID.get(3 * i) + "@" + ID.get((3 * i + 1)));
wr.println(ID.get(3 * i + 2));
}
} catch (IOException ex) {
}
}