@Override
public <G, D, L> void exportParameters(
ParameterHelper helper, DataDocument<G, D, L> document, D dictionary) {
document.addToDictionary(
dictionary, "$name", helper.toClassName(MutableMeasurementProfile.class));
if (intensityDeviation != 0 && !Double.isNaN(intensityDeviation))
document.addToDictionary(dictionary, "intensityDeviation", getIntensityDeviation());
if (getMedianNoiseIntensity() != 0 && !Double.isNaN(getMedianNoiseIntensity()))
document.addToDictionary(dictionary, "medianNoiseIntensity", getMedianNoiseIntensity());
if (formulaConstraints != null)
document.addToDictionary(
dictionary, "formulaConstraints", helper.wrap(document, getFormulaConstraints()));
if (getAllowedMassDeviation() != null)
document.addToDictionary(
dictionary, "allowedMassDeviation", getAllowedMassDeviation().toString());
if (getStandardMs1MassDeviation() != null)
document.addToDictionary(
dictionary, "standardMs1MassDeviation", getStandardMs1MassDeviation().toString());
if (getStandardMs2MassDeviation() != null)
document.addToDictionary(
dictionary, "standardMs2MassDeviation", getStandardMs2MassDeviation().toString());
if (getStandardMassDifferenceDeviation() != null)
document.addToDictionary(
dictionary,
"standardMassDifferenceDeviation",
getStandardMassDifferenceDeviation().toString());
}
@Override
public <G, D, L> void exportParameters(
ParameterHelper helper, DataDocument<G, D, L> document, D dictionary) {
document.addToDictionary(dictionary, "score", penalty);
}
@Override
public <G, D, L> void exportParameters(
ParameterHelper helper, DataDocument<G, D, L> document, D dictionary) {
document.addToDictionary(dictionary, "zeroIntensity", zeroIntensity);
document.addToDictionary(dictionary, "fullIntensity", fullIntensity);
}