public void initFromBuffer(ByteBuffer buf) throws IOException {
FastDeserializer in = new FastDeserializer(buf);
byte version = in.readByte(); // version number also embeds the type
type = ProcedureInvocationType.typeFromByte(version);
/*
* If it's a replicated invocation, there should be two txn IDs
* following the version byte. The first txn ID is the new txn ID, the
* second one is the original txn ID.
*/
if (ProcedureInvocationType.isDeprecatedInternalDRType(type)) {
originalTxnId = in.readLong();
originalUniqueId = in.readLong();
}
if (version >= BatchTimeoutOverrideType.BATCH_TIMEOUT_VERSION) {
BatchTimeoutOverrideType batchTimeoutType =
BatchTimeoutOverrideType.typeFromByte(in.readByte());
if (batchTimeoutType == BatchTimeoutOverrideType.NO_OVERRIDE_FOR_BATCH_TIMEOUT) {
batchTimeout = BatchTimeoutOverrideType.NO_TIMEOUT;
} else {
batchTimeout = in.readInt();
// Client side have already checked the batchTimeout value, but,
// on server side, we should check non-negative batchTimeout value again
// in case of someone is using a non-standard client.
if (batchTimeout < 0) {
throw new IllegalArgumentException("Timeout value can't be negative.");
}
}
}
procName = in.readString().intern();
clientHandle = in.readLong();
// do not deserialize parameters in ClientInterface context
serializedParams = in.remainder();
final ByteBuffer duplicate = serializedParams.duplicate();
params =
new FutureTask<ParameterSet>(
new Callable<ParameterSet>() {
@Override
public ParameterSet call() throws Exception {
return ParameterSet.fromByteBuffer(duplicate);
}
});
}
public ExportDataSource(Runnable onDrain, File adFile) throws IOException {
/*
* Certainly no more data coming if this is coming off of disk
*/
m_endOfStream = true;
m_onDrain = onDrain;
String overflowPath = adFile.getParent();
FileInputStream fis = new FileInputStream(adFile);
byte data[] = new byte[(int) adFile.length()];
int read = fis.read(data);
if (read != data.length) {
throw new IOException("Failed to read ad file " + adFile);
}
FastDeserializer fds = new FastDeserializer(data);
m_HSId = fds.readLong();
m_database = fds.readString();
m_generation = fds.readLong();
m_partitionId = fds.readInt();
m_signature = fds.readString();
m_tableName = fds.readString();
fds.readLong(); // timestamp of JVM startup can be ignored
int numColumns = fds.readInt();
for (int ii = 0; ii < numColumns; ++ii) {
m_columnNames.add(fds.readString());
int columnType = fds.readInt();
m_columnTypes.add(columnType);
}
String nonce = m_signature + "_" + m_HSId + "_" + m_partitionId;
m_committedBuffers = new StreamBlockQueue(overflowPath, nonce);
// compute the number of bytes necessary to hold one bit per
// schema column
m_nullArrayLength = ((m_columnTypes.size() + 7) & -8) >> 3;
}
// XXX maybe consider an IOException subclass at some point
public TableSaveFile(
FileChannel dataIn,
int readAheadChunks,
Integer[] relevantPartitionIds,
boolean continueOnCorruptedChunk)
throws IOException {
try {
EELibraryLoader.loadExecutionEngineLibrary(true);
if (relevantPartitionIds == null) {
m_relevantPartitionIds = null;
} else {
m_relevantPartitionIds = new HashSet<Integer>();
for (Integer i : relevantPartitionIds) {
m_relevantPartitionIds.add(i);
}
}
m_chunkReads = new Semaphore(readAheadChunks);
m_saveFile = dataIn;
m_continueOnCorruptedChunk = continueOnCorruptedChunk;
final PureJavaCrc32 crc = new PureJavaCrc32();
/*
* If the CRC check fails because the file wasn't completed
*/
final PureJavaCrc32 secondCRC = new PureJavaCrc32();
/*
* Get the header with the save restore specific information
*/
final ByteBuffer lengthBuffer = ByteBuffer.allocate(8);
while (lengthBuffer.hasRemaining()) {
final int read = m_saveFile.read(lengthBuffer);
if (read == -1) {
throw new EOFException();
}
}
lengthBuffer.flip();
final int originalCRC = lengthBuffer.getInt();
int length = lengthBuffer.getInt();
crc.update(lengthBuffer.array(), 4, 4);
secondCRC.update(lengthBuffer.array(), 4, 4);
if (length < 0) {
throw new IOException("Corrupted save file has negative header length");
}
if (length > 2097152) {
throw new IOException("Corrupted save file has unreasonable header length > 2 megs");
}
final ByteBuffer saveRestoreHeader = ByteBuffer.allocate(length);
while (saveRestoreHeader.hasRemaining()) {
final int read = m_saveFile.read(saveRestoreHeader);
if (read == -1 || read < length) {
throw new EOFException();
}
}
saveRestoreHeader.flip();
crc.update(saveRestoreHeader.array());
secondCRC.update(new byte[] {1});
secondCRC.update(saveRestoreHeader.array(), 1, saveRestoreHeader.array().length - 1);
/*
* Get the template for the VoltTable serialization header.
* It will have an extra length value preceded to it so that
* it can be sucked straight into a buffer. This will not
* contain a row count since that varies from chunk to chunk
* and is supplied by the chunk
*/
lengthBuffer.clear();
lengthBuffer.limit(4);
/*
* Why this stupidity and no while loop?
* Because java is broken and complains about a random final
* elsewhere if you do.
*/
{
final int read = m_saveFile.read(lengthBuffer);
if (read == -1) {
throw new EOFException();
}
}
crc.update(lengthBuffer.array(), 0, 4);
secondCRC.update(lengthBuffer.array(), 0, 4);
lengthBuffer.flip();
length = lengthBuffer.getInt();
if (length < 4) {
throw new IOException(
"Corrupted save file has negative length or too small length for VoltTable header");
}
if (length > 2097152) {
throw new IOException(
"Corrupted save file has unreasonable VoltTable header length > 2 megs");
}
m_tableHeader = ByteBuffer.allocate(length + 4);
m_tableHeader.putInt(length);
while (m_tableHeader.hasRemaining()) {
final int read = m_saveFile.read(m_tableHeader);
if (read == -1) {
throw new EOFException();
}
}
crc.update(m_tableHeader.array(), 4, length);
secondCRC.update(m_tableHeader.array(), 4, length);
boolean failedCRCDueToNotCompleted = false;
final int actualCRC = (int) crc.getValue();
if (originalCRC != actualCRC) {
/*
* Check if the CRC mismatch is due to the snapshot not being completed
*/
final int secondCRCValue = (int) secondCRC.getValue();
if (secondCRCValue == originalCRC) {
failedCRCDueToNotCompleted = true;
} else {
throw new IOException("Checksum mismatch");
}
}
FastDeserializer fd = new FastDeserializer(saveRestoreHeader);
byte completedByte = fd.readByte();
m_completed = failedCRCDueToNotCompleted ? false : (completedByte == 1 ? true : false);
for (int ii = 0; ii < 4; ii++) {
m_versionNum[ii] = fd.readInt();
}
/*
* Support the original pre 1.3 header format as well as a new JSON format.
* JSON will make it possible to add info to a snapshot header without
* breaking backwards compatibility.
*/
if (m_versionNum[3] == 0) {
m_txnId = fd.readLong();
m_timestamp = TransactionIdManager.getTimestampFromTransactionId(m_txnId);
m_hostId = fd.readInt();
m_hostname = fd.readString();
m_clusterName = fd.readString();
m_databaseName = fd.readString();
m_tableName = fd.readString();
m_isReplicated = fd.readBoolean();
m_isCompressed = false;
m_checksumType = ChecksumType.CRC32;
if (!m_isReplicated) {
m_partitionIds = (int[]) fd.readArray(int.class);
if (!m_completed) {
for (Integer partitionId : m_partitionIds) {
m_corruptedPartitions.add(partitionId);
}
}
m_totalPartitions = fd.readInt();
} else {
m_partitionIds = new int[] {0};
m_totalPartitions = 1;
if (!m_completed) {
m_corruptedPartitions.add(0);
}
}
m_hasVersion2FormatChunks = false;
} else {
assert (m_versionNum[3] == 1 || m_versionNum[3] == 2);
if (m_versionNum[3] >= 2) {
m_hasVersion2FormatChunks = true;
} else {
m_hasVersion2FormatChunks = false;
}
int numJSONBytes = fd.readInt();
byte jsonBytes[] = new byte[numJSONBytes];
fd.readFully(jsonBytes);
String jsonString = new String(jsonBytes, "UTF-8");
JSONObject obj = new JSONObject(jsonString);
m_txnId = obj.getLong("txnId");
// Timestamp field added for 3.0, might not be there
if (obj.has("timestamp")) {
m_timestamp = obj.getLong("timestamp");
} else {
// Pre 3.0/IV2 the timestamp was in the transactionid
m_timestamp = TransactionIdManager.getTimestampFromTransactionId(m_txnId);
}
m_hostId = obj.getInt("hostId");
m_hostname = obj.getString("hostname");
m_clusterName = obj.getString("clusterName");
m_databaseName = obj.getString("databaseName");
m_tableName = obj.getString("tableName");
m_isReplicated = obj.getBoolean("isReplicated");
m_isCompressed = obj.optBoolean("isCompressed", false);
m_checksumType = ChecksumType.valueOf(obj.optString("checksumType", "CRC32"));
if (!m_isReplicated) {
JSONArray partitionIds = obj.getJSONArray("partitionIds");
m_partitionIds = new int[partitionIds.length()];
for (int ii = 0; ii < m_partitionIds.length; ii++) {
m_partitionIds[ii] = partitionIds.getInt(ii);
}
if (!m_completed) {
for (Integer partitionId : m_partitionIds) {
m_corruptedPartitions.add(partitionId);
}
}
m_totalPartitions = obj.getInt("numPartitions");
} else {
m_partitionIds = new int[] {0};
m_totalPartitions = 1;
if (!m_completed) {
m_corruptedPartitions.add(0);
}
}
}
/*
* Several runtime exceptions can be thrown in valid failure cases where
* a corrupt save file is being detected.
*/
} catch (BufferUnderflowException e) {
throw new IOException(e);
} catch (BufferOverflowException e) {
throw new IOException(e);
} catch (IndexOutOfBoundsException e) {
throw new IOException(e);
} catch (JSONException e) {
throw new IOException(e);
}
}