@Test
public void testPaginatedLocal() throws IOException, GeneralSecurityException {
String[] ARGS = {
"--apiKey=" + helper.getApiKey(),
"--references=" + helper.PLATINUM_GENOMES_BRCA1_REFERENCES,
"--datasetId=" + helper.PLATINUM_GENOMES_DATASET,
"--output=" + outputPrefix,
"--useGrpc=false"
};
testBase(ARGS);
}
@Test
public void testStreamingCloud() throws IOException, GeneralSecurityException {
String[] ARGS = {
"--apiKey=" + helper.getApiKey(),
"--references=" + helper.PLATINUM_GENOMES_BRCA1_REFERENCES,
"--datasetId=" + helper.PLATINUM_GENOMES_DATASET,
"--output=" + outputPrefix,
"--project=" + helper.getTestProject(),
"--runner=BlockingDataflowPipelineRunner",
"--stagingLocation=" + helper.getTestStagingGcsFolder(),
"--useGrpc=true"
};
testBase(ARGS);
}
@Ignore
// TODO enable this test. For it to work, we'll need to add alpn to the classpath
// and figure out https://github.com/googlegenomics/dataflow-java/issues/119
@Test
public void testStreamingLocal() throws IOException, GeneralSecurityException {
String[] ARGS = {
"--apiKey=" + helper.getApiKey(),
"--references=" + helper.PLATINUM_GENOMES_BRCA1_REFERENCES,
"--datasetId=" + helper.PLATINUM_GENOMES_DATASET,
"--output=" + outputPrefix,
"--useGrpc=true"
};
testBase(ARGS);
}
