@Test
public void testSomeProteomicsExperiments() throws Exception {
for (String accession :
experimentTrader.getPublicExperimentAccessions(ExperimentType.PROTEOMICS_BASELINE)) {
testExtractExperimentDesignFromProteomicsExperiment(accession);
}
}
public void testExtractExperimentDesignFromProteomicsExperiment(String experimentAccession)
throws IOException {
BaselineExperiment baselineExperiment =
(BaselineExperiment) experimentTrader.getPublicExperiment(experimentAccession);
assertTrue(baselineExperiment.getType().isProteomicsBaseline());
subject = new BaselineExperimentAssayGroupsLines(baselineExperiment);
assertAbout(subject, experimentAccession);
}
@Test
public void testSomeRnaSeqExperiments() throws Exception {
Object[] a =
experimentTrader
.getPublicExperimentAccessions(ExperimentType.RNASEQ_MRNA_BASELINE)
.toArray();
for (int i = 0; i < 10 && i < a.length; i++) {
testExtractExperimentDesignFromRnaSeqExperiment((String) a[i]);
}
}
