public void fillAsVoteMerge() {
HashMap<String, LWNode> nodes = new HashMap<String, LWNode>();
ConnectivityMatrixList<ConnectivityMatrix> cms =
new ConnectivityMatrixList<ConnectivityMatrix>();
Iterator<LWMap> i = getMapList().iterator();
Iterator<Boolean> ci = null;
if (getActiveFileList() != null) ci = getActiveFileList().iterator();
while (i.hasNext()) {
Boolean b = Boolean.TRUE;
LWMap next = i.next();
if (ci != null && ci.hasNext()) {
b = ci.next();
}
if (b.booleanValue() /*&& (next != getBaseMap())*/) cms.add(new ConnectivityMatrix(next));
}
VoteAggregate voteAggregate = new VoteAggregate(cms);
voteAggregate.setNodeThreshold((double) getNodeThresholdSliderValue() / 100.0);
voteAggregate.setLinkThreshold((double) getLinkThresholdSliderValue() / 100.0);
// compute and create nodes in Merge Map
if (!excludeNodesFromBaseMap && baseMapIsActive()) {
addMergeNodesFromSourceMap(baseMap, voteAggregate, nodes);
}
if (!getFilterOnBaseMap()) {
Iterator<LWMap> maps = getMapList().iterator();
ci = null;
if (getActiveFileList() != null) ci = getActiveFileList().iterator();
while (maps.hasNext()) {
LWMap m = maps.next();
Boolean b = Boolean.TRUE;
if (ci != null && ci.hasNext()) {
b = ci.next();
}
if (m != baseMap && b.booleanValue()) {
addMergeNodesFromSourceMap(m, voteAggregate, nodes);
}
}
}
// compute and create links in Merge Map
Iterator<LWComponent> children1 =
getAllDescendents(LWComponent.ChildKind.PROPER).iterator(); // getNodeIterator();
while (children1.hasNext()) {
/*LWNode*/ LWComponent node1 = /*(LWNode)*/ children1.next();
Iterator<LWComponent> children2 =
getAllDescendents(LWComponent.ChildKind.PROPER).iterator(); // getNodeIterator();
while (children2.hasNext()) {
/*LWNode*/ LWComponent node2 = /*(LWNode)*/ children2.next();
if (!((node1 instanceof LWNode || node1 instanceof LWImage)
&& (node2 instanceof LWNode || node2 instanceof LWImage))) {
continue;
}
if (node2 != node1) {
boolean addLink =
voteAggregate.isLinkVoteAboveThreshold(
Util.getMergeProperty(node1), Util.getMergeProperty(node2));
if (addLink) {
LWLink link = new LWLink(node1, node2);
addLink(link);
cms.addLinkSourceMapMetadata(
Util.getMergeProperty(node1), Util.getMergeProperty(node2), link);
}
}
}
}
}
public void addMergeNodesFromSourceMap(
LWMap map, VoteAggregate voteAggregate, HashMap<String, LWNode> nodes) {
Iterator<LWComponent> children =
map.getAllDescendents(LWComponent.ChildKind.PROPER).iterator(); // map.getNodeIterator();
while (children.hasNext()) {
// LWNode comp = (LWNode)children.next();
LWComponent comp = children.next();
if (comp instanceof LWPortal) continue;
boolean repeat = false;
if (nodeAlreadyPresent(comp)) {
repeat = true;
/*if(RECORD_SOURCE_NODES)
{
LWNode node = nodes.get(Util.getMergeProperty(comp));
if(node.getNotes() !=null)
{
node.setNotes(node.getNotes()+"\n" + map.getLabel());
}
else
{
node.setNotes(map.getLabel());
}
}*/
}
if (voteAggregate.isNodeVoteAboveThreshold(Util.getMergeProperty(comp))) {
// LWNode node = (LWNode)comp.duplicate();
LWComponent node = comp.duplicate();
String sourceLabel = node.getLabel();
if (sourceLabel == null) sourceLabel = "";
edu.tufts.vue.metadata.VueMetadataElement vme =
new edu.tufts.vue.metadata.VueMetadataElement();
vme.setType(edu.tufts.vue.metadata.VueMetadataElement.OTHER);
// todo: looks like this may be needed in future -- may be an issue
// of map list in merge maps panel -- or otherwise might require
// more generic approach (certainly a seperate method either here or in
// merge maps panel or in VueMetadataElement is in order)
/*String mapLabel = comp.getMap().getLabel();
if(mapLabel != null)
{
if(mapLabel.contains(".vue"))
{
mapLabel = mapLabel.substring(0,mapLabel.indexOf(".vue"));
}
}
else
{
mapLabel = "";
}*/
vme.setObject("source: " + comp.getMap().getLabel() + "," + sourceLabel);
node.getMetadataList().getMetadata().add(vme);
if (!repeat) {
/*if(RECORD_SOURCE_NODES)
{
if(node.getNotes() !=null)
{
node.setNotes(node.getNotes()+"\n" + map.getLabel());
}
else
{
node.setNotes(map.getLabel());
}
nodes.put(Util.getMergeProperty(comp),node);
}*/
// addNode(node);
if (!excludeNodesFromBaseMap || !nodePresentOnBaseMap(node)) {
add(node);
}
}
}
}
}