public static void main(String[] args) {
Timer.showStdErr("Start");
// Create an input file iterator
String inputFile = Gpr.HOME + "/snpEff/ins.txt";
VariantFileIterator seqChangeFileIterator = new SeqChangeTxtFileIterator(inputFile);
// ---
// Iterate over input file
// ---
for (Variant seqChange : seqChangeFileIterator) {
System.out.println(seqChange + "\t" + seqChange.getChangeType());
}
// Zzz zzz = new Zzz(null);
// zzz.load("testHg3771Chr1");
// zzz.run();
// Timer.showStdErr("End");
}
