// print formatted info in no particular order public String getInfoString() { String s = "<HTML>"; // gene info if (geneInfoSet) { s += "<B>"; if (gene.getGeneType().equals(Gene.geneType.ENTREZ)) { s += "Entrez Gene"; } else if (gene.getGeneType().equals(Gene.geneType.ENSEMBL)) { s += "Ensembl Gene"; } s += "</B><BR>"; String name = gene.getName(); if (name != null) s += "Name: " + name + "<BR>"; String description = gene.getDescription(); if (description != null) s += "Description: " + description + "<BR>"; String chromosome = gene.getChromosome(); if (chromosome != null) s += "Chromosome: " + chromosome + "<BR>"; s += "Start: " + gene.getStart() + "<BR>"; s += "End: " + gene.getEnd() + "<BR>"; s += "<BR>"; } Iterator it = attributes.keySet().iterator(); while (it.hasNext()) { String node = (String) it.next(); if (node.equals("Graphics")) continue; s += "<B>" + node + "</B><BR>"; Iterator currentIt = attributes.get(node).keySet().iterator(); while (currentIt.hasNext()) { String key = (String) currentIt.next(); s += key + ": " + attributes.get(node).get(key) + "<BR>"; } s += "<BR>"; } s += "</HTML>"; return s; }