public void copyInitialState(Path origAppDir) throws IOException {
// locate previous snapshot
String newAppDir = this.dag.assertAppPath();
FSRecoveryHandler recoveryHandler = new FSRecoveryHandler(origAppDir.toString(), conf);
// read snapshot against new dependencies
Object snapshot = recoveryHandler.restore();
if (snapshot == null) {
throw new IllegalArgumentException("No previous application state found in " + origAppDir);
}
InputStream logIs = recoveryHandler.getLog();
// modify snapshot state to switch app id
((StreamingContainerManager.CheckpointState) snapshot).setApplicationId(this.dag, conf);
Path checkpointPath = new Path(newAppDir, LogicalPlan.SUBDIR_CHECKPOINTS);
FileSystem fs = FileSystem.newInstance(origAppDir.toUri(), conf);
// remove the path that was created by the storage agent during deserialization and replacement
fs.delete(checkpointPath, true);
// write snapshot to new location
recoveryHandler = new FSRecoveryHandler(newAppDir, conf);
recoveryHandler.save(snapshot);
OutputStream logOs = recoveryHandler.rotateLog();
IOUtils.copy(logIs, logOs);
logOs.flush();
logOs.close();
logIs.close();
// copy sub directories that are not present in target
FileStatus[] lFiles = fs.listStatus(origAppDir);
for (FileStatus f : lFiles) {
if (f.isDirectory()) {
String targetPath = f.getPath().toString().replace(origAppDir.toString(), newAppDir);
if (!fs.exists(new Path(targetPath))) {
LOG.debug("Copying {} to {}", f.getPath(), targetPath);
FileUtil.copy(fs, f.getPath(), fs, new Path(targetPath), false, conf);
// FSUtil.copy(fs, f, fs, new Path(targetPath), false, false, conf);
} else {
LOG.debug("Ignoring {} as it already exists under {}", f.getPath(), targetPath);
// FSUtil.setPermission(fs, new Path(targetPath), new FsPermission((short)0777));
}
}
}
}
public static void recursePath(Configuration conf, Path path, Job job) {
try {
FileSystem fs = path.getFileSystem(conf);
FileStatus[] fstats = fs.listStatus(path);
if (fstats != null) {
for (FileStatus f : fstats) {
Path p = f.getPath();
;
if (fs.isFile(p)) {
// connection times out otherwise
System.err.println("file:" + p.toString());
FileInputFormat.addInputPath(job, p);
} else {
System.err.println("dir:" + p.toString());
recursePath(conf, p, job);
}
}
}
} catch (IOException e) {
// shouldn't be here
throw new RuntimeException(e);
}
}
public int run(String[] args) throws IOException, ClassNotFoundException, InterruptedException {
if (args.length != 2) {
System.out.println("Usage: FeatureMatching ID <inputName.jpeg/inputName.jpg>");
System.exit(1);
}
SimpleDateFormat sdf = new SimpleDateFormat("", Locale.US);
sdf.applyPattern("yyyy-MM-dd_HH-mm-ss");
String time = sdf.format(new Date());
Job job = Job.getInstance();
ID = "/" + args[0];
String filename = args[1];
filename = filename.toLowerCase();
System.out.println("current filename:" + filename);
// Detect illegal username (if the username dir doesn't exist)
File userPath = new File(LOCAL_USER_DIR + ID);
if (!userPath.exists()) {
System.out.println("Unauthorized username!!!\nExiting......");
System.exit(1);
}
// Preprocess the input image.jpg from local dir: /local.../user/ID/input/image.jpg
// Save the features to local dir: hdfs://.../user/ID/input/image.jpg
extractQueryFeatures2HDFS(filename, job);
// Add the feature file to the hdfs cache
String featureFileName = filename.substring(0, filename.lastIndexOf(".")) + ".json";
// job.addCacheFile(new Path(HDFS_HOME + USER + ID + INPUT + "/" +
// featureFileName).toUri());
job.getConfiguration()
.set("featureFilePath", HDFS_HOME + USER + ID + INPUT + "/" + featureFileName);
// Check the file type. Only support jpeg/jpg type images
String type = filename.substring(args[1].lastIndexOf("."));
if (!(type.equals(".jpg") || type.equals(".jpeg"))) {
System.out.println("Image type not supported!!!\nExiting");
System.exit(1);
}
// Input: hdfs://.../features/
// The feature dir is a location of all features extracted from the database
String inputPathStr = HDFS_HOME + FEATURES;
// Output: hdfs://.../user/ID/output/
String outputPathStr = HDFS_HOME + USER + ID + OUTPUT + "/" + time;
job.setInputFormatClass(KeyValueTextInputFormat.class);
// job.setOutputFormatClass(TextOutputFormat.class);
// Get the lists of all feature files: /.../features/data/part-*
FileSystem fs = FileSystem.get(job.getConfiguration());
FileStatus[] statuses = fs.listStatus(new Path(inputPathStr));
StringBuffer sb = new StringBuffer();
for (FileStatus fileStatus : statuses) {
sb.append(fileStatus.getPath() + ",");
}
sb.deleteCharAt(sb.lastIndexOf(","));
job.setJarByClass(FeatureMatching.class);
job.setMapperClass(FeatureMatchMapper.class);
job.setReducerClass(FeatureMatchReducer.class);
// only need one reducer to collect the result
job.setNumReduceTasks(1);
job.setMapOutputKeyClass(IntWritable.class);
job.setMapOutputValueClass(Text.class);
job.setOutputKeyClass(Text.class);
job.setOutputValueClass(DoubleWritable.class);
// Input a directory, so need the recursive input
FileInputFormat.setInputDirRecursive(job, true);
// Set the PathFilter, to omit _SUCCESS files
// (This is not working correctly, as the PathFilter class is an interface rather than a class.
// But the 2nd arg asks me to extend the PathFilter)
// FileInputFormat.setInputPathFilter(job, MyPathFilter.class);
//
// FileInputFormat.setInputPaths(job, new Path(inputPathStr));
FileInputFormat.setInputPaths(job, sb.toString());
FileOutputFormat.setOutputPath(job, new Path(outputPathStr));
boolean success = job.waitForCompletion(true);
return success ? 0 : 1;
}
/**
* Method to go though the HDFS filesystem in a DFS to find all files
*
* <p>fs:FileSystem object from HDFS minDate: Oldest date for files to be backed up maxDate:Newest
* date for files to be backed up p:Path in HDFS to look for files pathList:Will be filled with
* all files in p hmTimestamps: hashmap of timestamps for later sorting
*/
public void checkDir(
FileSystem fs,
long minDate,
long maxDate,
Path p,
ArrayList<Path> pathList,
HashMap<Path, Long> hmTimestamps) {
long tmpDate;
FileStatus[] fStat;
try {
String sPath = p.toUri().getPath();
// If this is a directory
if (fs.getFileStatus(p).isDir()) {
// ignore certain directories
if ("dfstmp".equals(p.getName())
|| "tmp".equals(p.getName())
|| "jobtracker".equals(p.getName())
|| sPath.startsWith("/mapred")
|| "ops".equals(p.getName())
|| p.getName().startsWith("_distcp_logs")) {
return;
}
// dump the mkdir and chmod commands for this
// directory -- skip root directory only
{
FileStatus stat = fs.getFileStatus(p);
if (!sPath.equals("/")) {
m_wrMkdirs.println("hadoop fs -mkdir " + sPath);
}
m_wrChmods.println(
"hadoop fs -chown " + stat.getOwner() + ":" + stat.getGroup() + " " + sPath);
Short sh = new Short(stat.getPermission().toShort());
m_wrChmods.println(
"hadoop fs -chmod " + Long.toOctalString(sh.longValue()) + " " + sPath);
}
fStat = fs.listStatus(p);
// Do a recursive call to all elements
for (int i = 0; i < fStat.length; i++) {
checkDir(fs, minDate, maxDate, fStat[i].getPath(), pathList, hmTimestamps);
}
} else {
// If not a directory then we've found a file
// ignore crc files
if (p.getName().endsWith(".crc")) {
return;
}
// ignore other files
if (sPath.startsWith("/user/oozie/etl/workflows/")) {
return;
}
// try to get the table name from the path. There are
// various types of tables, from those replicated from
// another database to regular hive tables to
// partitioned hive tables. We use table names to
// both exclude some from the backup, and for the rest
// to dump out the schema and partition name.
if (m_ignoreTables != null && m_ignoreTables.doIgnoreFile(sPath)) {
m_nIgnoredTables++;
if (m_nIgnoredTables < 5) {
System.out.println("Skipping ignore-table file: " + sPath);
} else if (m_nIgnoredTables == 5) {
System.out.println("(...not showing other skipped tables...)");
}
return;
}
FileStatus stat = fs.getFileStatus(p);
tmpDate = stat.getModificationTime() / 1000;
// store the chmods/chowns for all files
m_wrChmods.println(
"hadoop fs -chown " + stat.getOwner() + ":" + stat.getGroup() + " " + sPath);
m_wrChmods.println("hadoop fs -chmod " + stat.getPermission().toShort() + " " + sPath);
// check dates. is it too young?
if (tmpDate < minDate) {
return;
}
// is the file too recent?
if (tmpDate > maxDate) {
// System.out.println("file too recent: " + sPath);
return;
}
// file timestamp is ok
pathList.add(p);
hmTimestamps.put(p, new Long(tmpDate));
// store info about total bytes neeed to backup
m_nTotalBytes += fs.getContentSummary(p).getLength();
}
} catch (IOException e) {
System.err.println("ERROR: could not open " + p + ": " + e);
// System.exit(1) ;
}
}
public void doTestTextBatchAppend() throws Exception {
LOG.debug("Starting...");
final long rollCount = 10;
final long batchSize = 2;
final String fileName = "PageView";
String newPath = testPath + "/singleTextBucket";
int totalEvents = 0;
int i = 1, j = 1;
// clear the test directory
Configuration conf = new Configuration();
FileSystem fs = FileSystem.get(conf);
Path dirPath = new Path(newPath);
fs.delete(dirPath, true);
fs.mkdirs(dirPath);
Context context = new Context();
context.put("hdfs.path", newPath);
context.put("hdfs.rollCount", String.valueOf(rollCount));
context.put("hdfs.batchSize", String.valueOf(batchSize));
context.put("hdfs.filePrefix", "pageview");
Channel channel = new MemoryChannel();
Configurables.configure(channel, context);
sink.setChannel(channel);
sink.start();
Calendar eventDate = Calendar.getInstance();
Date currentDate = new Date();
Map<String, String> header = new HashMap<String, String>();
header.put("topic", "PageView");
List<String> bodies = Lists.newArrayList();
// 将测试的事件推入到通道中
for (i = 1; i <= (rollCount * 10) / batchSize; i++) {
Transaction txn = channel.getTransaction();
txn.begin();
for (j = 1; j <= batchSize; j++) {
header.put("timestamp", String.valueOf(currentDate.getTime()));
Event event = new SimpleEvent();
eventDate.clear();
eventDate.set(2014, i, i, i, 0);
String body = "Test." + i + "." + j;
event.setHeaders(header);
event.setBody(body.getBytes());
bodies.add(body);
channel.put(event);
totalEvents++;
}
txn.commit();
txn.close();
// execute sink to process the events
sink.process();
}
sink.stop();
FileStatus[] dirStat = fs.listStatus(dirPath);
Path fList[] = FileUtil.stat2Paths(dirStat);
long expectedFiles = totalEvents / rollCount;
if (totalEvents % rollCount > 0) {
expectedFiles++;
}
Assert.assertEquals(
"num files wrong, found: " + Lists.newArrayList(fList), expectedFiles, fList.length);
// 检查所有写入文件的内容
verifyOutputTextFiles(fs, conf, dirPath.toUri().getPath(), fileName, bodies);
}
static void checkRecords(Configuration defaults, Path sortInput, Path sortOutput)
throws IOException {
FileSystem inputfs = sortInput.getFileSystem(defaults);
FileSystem outputfs = sortOutput.getFileSystem(defaults);
FileSystem defaultfs = FileSystem.get(defaults);
JobConf jobConf = new JobConf(defaults, RecordStatsChecker.class);
jobConf.setJobName("sortvalidate-recordstats-checker");
int noSortReduceTasks = outputfs.listStatus(sortOutput, sortPathsFilter).length;
jobConf.setInt("sortvalidate.sort.reduce.tasks", noSortReduceTasks);
int noSortInputpaths = inputfs.listStatus(sortInput).length;
jobConf.setInputFormat(NonSplitableSequenceFileInputFormat.class);
jobConf.setOutputFormat(SequenceFileOutputFormat.class);
jobConf.setOutputKeyClass(IntWritable.class);
jobConf.setOutputValueClass(RecordStatsChecker.RecordStatsWritable.class);
jobConf.setMapperClass(Map.class);
jobConf.setCombinerClass(Reduce.class);
jobConf.setReducerClass(Reduce.class);
jobConf.setNumMapTasks(noSortReduceTasks);
jobConf.setNumReduceTasks(1);
FileInputFormat.setInputPaths(jobConf, sortInput);
FileInputFormat.addInputPath(jobConf, sortOutput);
Path outputPath = new Path("/tmp/sortvalidate/recordstatschecker");
if (defaultfs.exists(outputPath)) {
defaultfs.delete(outputPath, true);
}
FileOutputFormat.setOutputPath(jobConf, outputPath);
// Uncomment to run locally in a single process
// job_conf.set("mapred.job.tracker", "local");
Path[] inputPaths = FileInputFormat.getInputPaths(jobConf);
System.out.println(
"\nSortValidator.RecordStatsChecker: Validate sort "
+ "from "
+ inputPaths[0]
+ " ("
+ noSortInputpaths
+ " files), "
+ inputPaths[1]
+ " ("
+ noSortReduceTasks
+ " files) into "
+ FileOutputFormat.getOutputPath(jobConf)
+ " with 1 reducer.");
Date startTime = new Date();
System.out.println("Job started: " + startTime);
JobClient.runJob(jobConf);
Date end_time = new Date();
System.out.println("Job ended: " + end_time);
System.out.println(
"The job took " + (end_time.getTime() - startTime.getTime()) / 1000 + " seconds.");
// Check to ensure that the statistics of the
// framework's sort-input and sort-output match
SequenceFile.Reader stats =
new SequenceFile.Reader(defaultfs, new Path(outputPath, "part-00000"), defaults);
IntWritable k1 = new IntWritable();
IntWritable k2 = new IntWritable();
RecordStatsWritable v1 = new RecordStatsWritable();
RecordStatsWritable v2 = new RecordStatsWritable();
if (!stats.next(k1, v1)) {
throw new IOException("Failed to read record #1 from reduce's output");
}
if (!stats.next(k2, v2)) {
throw new IOException("Failed to read record #2 from reduce's output");
}
if ((v1.getBytes() != v2.getBytes())
|| (v1.getRecords() != v2.getRecords())
|| v1.getChecksum() != v2.getChecksum()) {
throw new IOException(
"("
+ v1.getBytes()
+ ", "
+ v1.getRecords()
+ ", "
+ v1.getChecksum()
+ ") v/s ("
+ v2.getBytes()
+ ", "
+ v2.getRecords()
+ ", "
+ v2.getChecksum()
+ ")");
}
}