/** {@inheritDoc} */
public void setEnabled(boolean b) {
if (b != isEnabled()) {
super.setEnabled(b);
if ((selectedComponents & DISPLAY_DATE) > 0) {
yearDecrButton.setEnabled(b);
monthDecrButton.setEnabled(b);
monthYearLabel.setEnabled(b);
monthIncrButton.setEnabled(b);
yearIncrButton.setEnabled(b);
for (int day = 0; day < 7; day++) {
dayOfWeekLabels[day].setEnabled(b);
}
for (int row = 0; row < 6; row++) {
for (int day = 0; day < 7; day++) {
if (dayButtons[row][day].getText().length() > 0) {
dayButtons[row][day].setEnabled(b);
}
}
}
}
if ((selectedComponents & DISPLAY_TIME) > 0) {
spinner.setEnabled(b);
}
}
}
private void setComponentsEnabled(boolean enabled) {
list.setEnabled(enabled);
process.setEnabled(enabled);
remove.setEnabled(enabled);
xres.setEnabled(enabled);
yres.setEnabled(enabled);
aspect.setEnabled(enabled);
boolean b = aspect.isSelected() && enabled;
colorLabel.setEnabled(b);
colorBox.setEnabled(b);
redLabel.setEnabled(b);
red.setEnabled(b);
redValue.setEnabled(b);
greenLabel.setEnabled(b);
green.setEnabled(b);
greenValue.setEnabled(b);
blueLabel.setEnabled(b);
blue.setEnabled(b);
blueValue.setEnabled(b);
format.setEnabled(enabled);
algorithm.setEnabled(enabled);
prepend.setEnabled(enabled);
append.setEnabled(enabled);
output.setEnabled(enabled);
}
public void setEnabled(boolean enabled) {
super.setEnabled(enabled);
if (myToggleHistoryLabel != null) {
final Color bg = enabled ? UIUtil.getTextFieldBackground() : UIUtil.getPanelBackground();
myToggleHistoryLabel.setBackground(bg);
myClearFieldLabel.setBackground(bg);
}
}
/**
* Enable or disable the JCalendar.
*
* @param enabled the new enabled value
*/
public void setEnabled(boolean enabled) {
super.setEnabled(enabled);
if (dayChooser != null) {
dayChooser.setEnabled(enabled);
monthChooser.setEnabled(enabled);
yearChooser.setEnabled(enabled);
}
}
/**
* As per the JPanle superclass setEnabled method. Also calls the setEnabled method of the text
* area, load button, clear button and organize button on this panel.
*
* @param enable Whether to enable or disable this panel and its components.
*/
public void setEnabled(boolean enable) {
super.setEnabled(enable);
text_area.setEnabled(enable);
load_button.setEnabled(enable);
save_button.setEnabled(enable);
clear_button.setEnabled(enable);
organize_button.setEnabled(enable);
}
public void setEnabled(boolean enabled) {
super.setEnabled(enabled);
myTable.setRowSelectionAllowed(enabled);
myTableModel.fireTableDataChanged();
}
/**
* Does Nothing
*
* @param selected, true to enable, false to disable.
*/
public void setNodeOrLinkSelected(boolean selected) {
if (tbrToolBar != null) {
UIViewFrame frame = ProjectCompendium.APP.getCurrentFrame();
if (selected && frame instanceof UIMapViewFrame) {
UIMapViewFrame oMapFrame = (UIMapViewFrame) frame;
UIViewPane pane = oMapFrame.getViewPane();
int nLinkCount = pane.getNumberOfSelectedLinks();
if (nLinkCount == 0) return;
bJustSetting = true;
int i = 0;
UILink link = null;
LinkProperties linkProps = null;
boolean bDefaultLinkStyle = false;
boolean bDefaultLinkDashed = false;
boolean bDefaultLinkWeight = false;
boolean bDefaultLinkColour = false;
boolean bDefaultArrowType = false;
LinkProperties defaultprops = UIUtilities.getLinkProperties("");
int linkstyle = defaultprops.getLinkStyle();
int linkdashed = defaultprops.getLinkDashed();
int linkweight = defaultprops.getLinkWeight();
int linkcolour = defaultprops.getLinkColour();
int arrowtype = defaultprops.getArrowType();
for (Enumeration e = pane.getSelectedLinks(); e.hasMoreElements(); ) {
link = (UILink) e.nextElement();
linkProps = link.getLinkProperties();
if (i == 0) {
linkstyle = linkProps.getLinkStyle();
linkdashed = linkProps.getLinkDashed();
linkweight = linkProps.getLinkWeight();
linkcolour = linkProps.getLinkColour();
arrowtype = linkProps.getArrowType();
i++;
} else {
if (arrowtype != linkProps.getArrowType()) {
bDefaultArrowType = true;
}
if (linkstyle != linkProps.getLinkStyle()) {
bDefaultLinkStyle = true;
}
if (linkdashed != linkProps.getLinkDashed()) {
bDefaultLinkDashed = true;
}
if (linkweight != linkProps.getLinkWeight()) {
bDefaultLinkWeight = true;
}
if (linkcolour != linkProps.getLinkColour()) {
bDefaultLinkColour = true;
}
}
}
tbrToolBar.setEnabled(true);
if (bDefaultLinkColour) {
selectedLinkColour = new Color(defaultprops.getLinkColour());
} else {
selectedLinkColour = new Color(linkcolour);
}
linkColourPanel.setEnabled(true);
txtLinkColour.setEnabled(true);
cbLineWeight.setEnabled(true);
if (bDefaultLinkWeight) {
cbLineWeight.setSelectedIndex(defaultprops.getLinkWeight() - 1);
} else {
cbLineWeight.setSelectedIndex(linkweight - 1);
}
cbArrows.setEnabled(true);
if (bDefaultArrowType) {
cbArrows.setSelectedIndex(defaultprops.getArrowType());
} else {
cbArrows.setSelectedIndex(arrowtype);
}
cbLinkStyle.setEnabled(true);
if (bDefaultLinkStyle) {
cbLinkStyle.setSelectedIndex(defaultprops.getLinkStyle());
} else {
cbLinkStyle.setSelectedIndex(linkstyle);
}
cbLinkDashed.setEnabled(true);
if (bDefaultLinkDashed) {
cbLinkDashed.setSelectedIndex(defaultprops.getLinkDashed());
} else {
cbLinkDashed.setSelectedIndex(linkdashed);
}
bJustSetting = false;
} else if (!selected) {
bJustSetting = true;
linkColourPanel.setEnabled(false);
txtLinkColour.setEnabled(false);
tbrToolBar.setEnabled(false);
cbArrows.setEnabled(false);
cbLineWeight.setEnabled(false);
cbLinkStyle.setEnabled(false);
cbLinkDashed.setEnabled(false);
bJustSetting = false;
}
}
}
public void setEnabled(boolean enabled) {
super.setEnabled(enabled);
setButtonEnabled(ADD, enabled);
// disable all the buttons ???
}
public ODEWizardScalaSci() {
editingClassName = "Lorenz";
systemOrder = 3; // the order of ODE system
copyTemplateButton =
new JButton("1. Copy and Edit Template", new ImageIcon("/scalaLab.jar/yellow-ball.gif"));
generateEditingButton = new JButton("2. Generate Java Class", new ImageIcon("./blue-ball.gif"));
saveJavaClassButton =
new JButton("3. Save Java Class", new ImageIcon("scalaLab.jar/red-ball.gif"));
compileJavaClassButton =
new JButton("4.a. Java Compile - External Compiler", new ImageIcon("blue-ball.gif"));
compileJavaInternalCompilerButton =
new JButton("4.b. Java Compile - Internal Compiler", new ImageIcon("blue-ball.gif"));
generateScriptCodeButton =
new JButton("Generate scalaSci Script", new ImageIcon("red-ball.gif"));
ODEWizardFrame = new JFrame("ODE Wizard for scalaSci with Java implementation of. ODEs");
editPanel = new JPanel();
editPanel.setLayout(new GridLayout(1, 2));
paramPanel = new JPanel(new GridLayout(1, 4));
availODEMethods.add("ODErke");
availODEMethods.add("ODEmultistep");
availODEMethods.add("ODEdiffsys");
ODEselectMethodLabel = new JLabel("ODE method: ");
ODEselectMethodComboBox = new JComboBox(availODEMethods);
ODEselectMethodComboBox.addActionListener(
new ActionListener() {
public void actionPerformed(ActionEvent e) {
ODESolveMethod = ODEselectMethodComboBox.getSelectedIndex();
updateTemplateText();
templateTextArea.setText(templateText);
currentlySelectedLabel.setText(
"Selected Method: " + (String) availODEMethods.get(ODESolveMethod));
}
});
JLabel javaFileTextLabel = new JLabel("Java File Name: ");
javaFileTextBox = new JTextField(editingClassName);
javaFileTextBox.addActionListener(
new ActionListener() {
public void actionPerformed(ActionEvent e) {
editingClassName = javaFileTextBox.getText();
String updatedStatusText = prepareStatusText();
statusAreaTop.setText(updatedStatusText);
}
});
JLabel systemOrderLabel = new JLabel("System order: ");
systemOrderText = new JTextField(String.valueOf(systemOrder));
systemOrderText.addActionListener(new editSystemOrder());
JPanel javaFilePanel = new JPanel();
javaFilePanel.add(javaFileTextLabel);
javaFilePanel.add(javaFileTextBox);
JPanel systemOrderPanel = new JPanel();
systemOrderPanel.add(systemOrderLabel);
systemOrderPanel.add(systemOrderText);
paramMethodPanel = new JPanel();
paramMethodPanel.add(ODEselectMethodLabel);
paramMethodPanel.add(ODEselectMethodComboBox);
paramPanel.add(paramMethodPanel);
paramPanel.add(javaFilePanel);
paramPanel.add(systemOrderPanel);
currentlySelectedLabel =
new JLabel("Selected Method: " + (String) availODEMethods.get(ODESolveMethod));
paramPanel.add(currentlySelectedLabel);
statusPanel = new JPanel(new GridLayout(2, 1));
statusAreaTop = new JTextArea();
statusAreaTop.setFont(new Font("Arial", Font.BOLD, 16));
String statusText = prepareStatusText();
statusAreaTop.setText(statusText);
statusAreaBottom = new JTextArea();
statusAreaBottom.setText(
"Step1: Copy and edit the template ODE (implements the famous Lorenz chaotic system),\n"
+ "Then set the name of your Java Class (instead of \"Lorenz\"), without the extension .java\n"
+ "Also set the proper order (i.e. number of equations and variables) of your system. ");
statusPanel.add(statusAreaTop);
statusPanel.add(statusAreaBottom);
templateTextArea = new JTextArea();
updateTemplateText();
templateTextArea.setFont(new Font("Arial", Font.ITALIC, 12));
templateTextArea.setText(templateText);
templateScrollPane = new JScrollPane();
templateViewPort = templateScrollPane.getViewport();
templateViewPort.add(templateTextArea);
ODEWizardTextArea = new JTextArea();
ODEWizardText = "";
ODEWizardTextArea.setText(ODEWizardText);
ODEWizardTextArea.setFont(new Font("Arial", Font.BOLD, 12));
ODEWizardScrollPane = new JScrollPane();
wizardViewPort = ODEWizardScrollPane.getViewport();
wizardViewPort.add(ODEWizardTextArea);
editPanel.add(ODEWizardScrollPane);
editPanel.add(templateScrollPane);
// Step 1: copy template of ODE implementation from the
// templateTextArea to ODEWizardTextArea
copyTemplateButton.addActionListener(
new ActionListener() {
public void actionPerformed(ActionEvent e) {
ODEWizardTextArea.setText(templateTextArea.getText());
generateEditingButton.setEnabled(true);
statusAreaBottom.setText(
"Step2: If you have implemented correctly your ODE, the wizard completes the ready to compile Java class");
}
});
// Step 2: generate Java Class from template
JPanel buttonPanel = new JPanel();
generateEditingButton.addActionListener(
new ActionListener() {
public void actionPerformed(ActionEvent e) {
String editingODE = ODEWizardTextArea.getText();
String classImplementationString = // "package javaPluggins; \n"+
"import numal.*; \n\n"
+ "public class "
+ editingClassName
+ " extends Object \n implements "
+ implementingInterfaces[ODESolveMethod]
+ " \n \n "
+ "{ \n";
classImplementationString += (editingODE + "}\n");
ODEWizardTextArea.setText(classImplementationString);
saveJavaClassButton.setEnabled(true);
statusAreaBottom.setText(
"Step3: The generated Java source is ready, you can check it, and then proceed to save.");
}
});
// Step 3: save generated Java Class on disk
saveJavaClassButton.addActionListener(
new ActionListener() {
public void actionPerformed(ActionEvent e) {
String currentWorkingDirectory = Directory.Current().get().path();
JFileChooser chooser = new JFileChooser(currentWorkingDirectory);
chooser.setSelectedFile(new File(editingClassName + ".java"));
int ret = chooser.showSaveDialog(ODEWizardFrame);
if (ret != JFileChooser.APPROVE_OPTION) {
return;
}
File f = chooser.getSelectedFile();
try {
PrintWriter out = new PrintWriter(f);
String javaCodeText = ODEWizardTextArea.getText();
out.write(javaCodeText);
out.close();
// update the notion of the working directory
String fullPathOfSavedFile = f.getAbsolutePath();
GlobalValues.workingDir =
fullPathOfSavedFile.substring(
0, fullPathOfSavedFile.lastIndexOf(File.separatorChar) + 1);
compileJavaClassButton.setEnabled(true);
compileJavaInternalCompilerButton.setEnabled(true);
statusAreaBottom.setText(
"Step4: The Java source file was saved to disk, \n "
+ "you can proceed to compile and load the corresponding class file");
} catch (java.io.FileNotFoundException enf) {
System.out.println("File " + f.getName() + " not found");
enf.printStackTrace();
} catch (Exception eOther) {
System.out.println("Exception trying to create PrintWriter");
eOther.printStackTrace();
}
}
});
// Step 4: Compile the generated Java class
compileJavaClassButton.addActionListener(
new ActionListener() {
public void actionPerformed(ActionEvent e) {
String currentWorkingDirectory = GlobalValues.workingDir;
JFileChooser chooser = new JFileChooser(currentWorkingDirectory);
int ret = chooser.showOpenDialog(ODEWizardFrame);
if (ret != JFileChooser.APPROVE_OPTION) {
return;
}
File f = chooser.getSelectedFile();
String javaFile = null;
try {
javaFile = f.getCanonicalPath();
} catch (IOException ex) {
System.out.println("I/O Exception in getCanonicalPath");
ex.printStackTrace();
}
// extract the path specification of the generated Java class that implements the ODE
// solution method,
// in order to update the ScalaSci class path
String SelectedFileWithPath = f.getAbsolutePath();
String SelectedFilePathOnly =
SelectedFileWithPath.substring(
0, SelectedFileWithPath.lastIndexOf(File.separatorChar));
if (GlobalValues.ScalaSciClassPath.length() == 0) GlobalValues.ScalaSciClassPath = ".";
if (GlobalValues.ScalaSciClassPath.indexOf(SelectedFilePathOnly) == -1) {
GlobalValues.ScalaSciClassPathComponents.add(0, SelectedFilePathOnly);
GlobalValues.ScalaSciClassPath =
GlobalValues.ScalaSciClassPath + File.pathSeparator + SelectedFilePathOnly;
}
// update also the ScalaSciClassPath property
StringBuilder fileStr = new StringBuilder();
Enumeration enumDirs = GlobalValues.ScalaSciClassPathComponents.elements();
while (enumDirs.hasMoreElements()) {
Object ce = enumDirs.nextElement();
fileStr.append(File.pathSeparator + (String) ce);
}
GlobalValues.settings.setProperty("ScalaSciClassPath", fileStr.toString());
ClassLoader parentClassLoader = getClass().getClassLoader();
GlobalValues.extensionClassLoader =
new ExtensionClassLoader(GlobalValues.ScalaSciClassPath, parentClassLoader);
// update GUI components to account for the updated ScalaSci classpath
scalaExec.scalaLab.scalaLab.updateTree();
boolean compilationSucccess = true;
String tempFileName = "";
tempFileName =
javaFile + ".java"; // public classes and Java files should have the same name
String[] command = new String[6];
command[0] = "javac";
command[1] = "-cp";
command[2] = GlobalValues.jarFilePath + File.pathSeparator + GlobalValues.homeDir;
command[3] = "-d"; // where to place output class files
command[4] = SelectedFilePathOnly; // the path to save the compiled class files
command[5] = javaFile; // full filename to compile
String compileCommandString =
command[0]
+ " "
+ command[1]
+ " "
+ command[2]
+ " "
+ command[3]
+ " "
+ command[4]
+ " "
+ command[5];
System.out.println("compileCommand Java= " + compileCommandString);
try {
Runtime rt = Runtime.getRuntime();
Process javaProcess = rt.exec(command);
// an error message?
StreamGobbler errorGobbler = new StreamGobbler(javaProcess.getErrorStream(), "ERROR");
// any output?
StreamGobbler outputGobbler =
new StreamGobbler(javaProcess.getInputStream(), "OUTPUT");
// kick them off
errorGobbler.start();
outputGobbler.start();
// any error???
javaProcess.waitFor();
int rv = javaProcess.exitValue();
String commandString = command[0] + " " + command[1] + " " + command[2];
if (rv == 0) {
System.out.println("Process: " + commandString + " exited successfully ");
generateScriptCodeButton.setEnabled(true);
statusAreaBottom.setText(
"Step5: You can proceed now to create a draft script that utilizes your Java-based ODE integrator");
} else
System.out.println(
"Process: " + commandString + " exited with error, error value = " + rv);
} catch (IOException exio) {
System.out.println("IOException trying to executing " + command);
exio.printStackTrace();
} catch (InterruptedException ie) {
System.out.println("Interrupted Exception trying to executing " + command);
ie.printStackTrace();
}
}
});
// Compile with the internal compiler
compileJavaInternalCompilerButton.addActionListener(
new ActionListener() {
@Override
public void actionPerformed(ActionEvent e) {
String currentWorkingDirectory = GlobalValues.workingDir;
JFileChooser chooser = new JFileChooser(currentWorkingDirectory);
int ret = chooser.showOpenDialog(ODEWizardFrame);
if (ret != JFileChooser.APPROVE_OPTION) {
return;
}
File f = chooser.getSelectedFile();
String javaFile = null;
try {
javaFile = f.getCanonicalPath();
} catch (IOException ex) {
System.out.println("I/O Exception in getCanonicalPath");
ex.printStackTrace();
}
// extract the path specification of the generated Java class that implements the ODE
// solution method,
// in order to update the ScalaSci class path
String SelectedFileWithPath = f.getAbsolutePath();
String SelectedFilePathOnly =
SelectedFileWithPath.substring(
0, SelectedFileWithPath.lastIndexOf(File.separatorChar));
if (GlobalValues.ScalaSciClassPath.length() == 0) GlobalValues.ScalaSciClassPath = ".";
if (GlobalValues.ScalaSciClassPath.indexOf(SelectedFilePathOnly) == -1) {
GlobalValues.ScalaSciClassPathComponents.add(0, SelectedFilePathOnly);
GlobalValues.ScalaSciClassPath =
GlobalValues.ScalaSciClassPath + File.pathSeparator + SelectedFilePathOnly;
}
// update also the ScalaSciClassPath property
StringBuilder fileStr = new StringBuilder();
Enumeration enumDirs = GlobalValues.ScalaSciClassPathComponents.elements();
while (enumDirs.hasMoreElements()) {
Object ce = enumDirs.nextElement();
fileStr.append(File.pathSeparator + (String) ce);
}
GlobalValues.settings.setProperty("ScalaSciClassPath", fileStr.toString());
ClassLoader parentClassLoader = getClass().getClassLoader();
GlobalValues.extensionClassLoader =
new ExtensionClassLoader(GlobalValues.ScalaSciClassPath, parentClassLoader);
// update GUI components to account for the updated ScalaSci classpath
scalaExec.scalaLab.scalaLab.updateTree();
String[] command = new String[11];
String toolboxes = "";
for (int k = 0; k < GlobalValues.ScalaSciClassPathComponents.size(); k++)
toolboxes =
toolboxes
+ File.pathSeparator
+ GlobalValues.ScalaSciClassPathComponents.elementAt(k);
// compile the temporary file
command[0] = "java";
command[1] = "-classpath";
command[2] =
"."
+ File.pathSeparator
+ GlobalValues.jarFilePath
+ File.pathSeparator
+ toolboxes
+ File.pathSeparator
+ SelectedFilePathOnly;
command[3] = "com.sun.tools.javac.Main"; // the name of the Java compiler class
command[4] = "-classpath";
command[5] = command[2];
command[6] = "-sourcepath";
command[7] = command[2];
command[8] = "-d"; // where to place output class files
command[9] = SelectedFilePathOnly;
command[10] = SelectedFileWithPath;
String compileCommandString =
command[0]
+ " "
+ command[1]
+ " "
+ command[2]
+ " "
+ command[3]
+ " "
+ command[4]
+ " "
+ command[5]
+ " "
+ command[6]
+ " "
+ command[7]
+ " "
+ command[8]
+ " "
+ command[9]
+ " "
+ command[10];
System.out.println("compileCommand Java= " + compileCommandString);
try {
Runtime rt = Runtime.getRuntime();
Process javaProcess = rt.exec(command);
// an error message?
StreamGobbler errorGobbler = new StreamGobbler(javaProcess.getErrorStream(), "ERROR");
// any output?
StreamGobbler outputGobbler =
new StreamGobbler(javaProcess.getInputStream(), "OUTPUT");
// kick them off
errorGobbler.start();
outputGobbler.start();
// any error???
javaProcess.waitFor();
int rv = javaProcess.exitValue();
if (rv == 0) {
System.out.println("Process: exited successfully ");
JavaCompile javaCompileObj = null;
try {
javaCompileObj = new JavaCompile();
} catch (Exception ex) {
JOptionPane.showMessageDialog(
null,
"Unable to compile. Please check if your system's PATH variable includes the path to your javac compiler",
"Cannot compile - Check PATH",
JOptionPane.INFORMATION_MESSAGE);
ex.printStackTrace();
}
generateScriptCodeButton.setEnabled(true);
statusAreaBottom.setText(
"Step5: You can proceed now to create a draft ScalaSci-Script that utilizes your Java-based ODE integrator");
} else System.out.println("Process: exited with error, error value = " + rv);
} catch (IOException exio) {
System.out.println("IOException trying to executing " + command);
exio.printStackTrace();
} catch (InterruptedException ie) {
System.out.println("Interrupted Exception trying to executing " + command);
ie.printStackTrace();
}
}
});
// Step 5: Generate Script Code
generateScriptCodeButton.addActionListener(
new ActionListener() {
public void actionPerformed(ActionEvent e) {
new scriptCodeGenerationFrame("ODE Script code", editingClassName, systemOrder);
}
});
buttonPanel.add(copyTemplateButton); // Step 1
buttonPanel.setEnabled(true);
buttonPanel.add(generateEditingButton); // Step 2
generateEditingButton.setEnabled(false);
buttonPanel.add(saveJavaClassButton); // Step 3
saveJavaClassButton.setEnabled(false);
buttonPanel.add(compileJavaClassButton); // Step 4
buttonPanel.add(compileJavaInternalCompilerButton);
compileJavaClassButton.setEnabled(false);
compileJavaInternalCompilerButton.setEnabled(false);
buttonPanel.add(generateScriptCodeButton); // Step 5
generateScriptCodeButton.setEnabled(false);
ODEWizardFrame.add(buttonPanel, BorderLayout.NORTH);
ODEWizardFrame.add(editPanel, BorderLayout.CENTER);
JPanel bottomPanel = new JPanel(new GridLayout(2, 1));
bottomPanel.add(paramPanel);
bottomPanel.add(statusPanel);
ODEWizardFrame.add(bottomPanel, BorderLayout.SOUTH);
ODEWizardFrame.setLocation(100, 100);
ODEWizardFrame.setSize(1400, 800);
ODEWizardFrame.setVisible(true);
}
public void setActive(boolean _active) {
activeEditor = _active;
changed = true;
firstButtonPanel.setEnabled(_active);
firstButton.setEnabled(_active);
}
private void setupUI() {
JPanel batchInputPanel = new JPanel();
batchInputPanel.setLayout(new GridLayoutManager(7, 2, new Insets(0, 0, 0, 0), -1, -1));
batchInputPanel.setEnabled(true);
this.add(
batchInputPanel,
new GridConstraints(
2,
0,
1,
1,
GridConstraints.ANCHOR_CENTER,
GridConstraints.FILL_BOTH,
GridConstraints.SIZEPOLICY_CAN_SHRINK | GridConstraints.SIZEPOLICY_CAN_GROW,
GridConstraints.SIZEPOLICY_CAN_SHRINK | GridConstraints.SIZEPOLICY_CAN_GROW,
null,
null,
null,
0,
false));
batchInputPanel.setBorder(
BorderFactory.createTitledBorder(BorderFactory.createEtchedBorder(), null));
final Spacer spacer3 = new Spacer();
batchInputPanel.add(
spacer3,
new GridConstraints(
6,
0,
1,
1,
GridConstraints.ANCHOR_CENTER,
GridConstraints.FILL_VERTICAL,
1,
GridConstraints.SIZEPOLICY_WANT_GROW,
null,
new Dimension(195, 14),
null,
0,
false));
dpiXLabel = new JLabel("DPI X: ");
batchInputPanel.add(
dpiXLabel,
new GridConstraints(
2,
0,
1,
1,
GridConstraints.ANCHOR_WEST,
GridConstraints.FILL_NONE,
GridConstraints.SIZEPOLICY_FIXED,
GridConstraints.SIZEPOLICY_FIXED,
null,
new Dimension(195, 16),
null,
0,
false));
dpiYLabel = new JLabel("DPI Y: ");
batchInputPanel.add(
dpiYLabel,
new GridConstraints(
3,
0,
1,
1,
GridConstraints.ANCHOR_WEST,
GridConstraints.FILL_NONE,
GridConstraints.SIZEPOLICY_FIXED,
GridConstraints.SIZEPOLICY_FIXED,
null,
new Dimension(195, 16),
null,
0,
false));
startDepthLabel = new JLabel("Start Depth (meter): ");
batchInputPanel.add(
startDepthLabel,
new GridConstraints(
4,
0,
1,
1,
GridConstraints.ANCHOR_WEST,
GridConstraints.FILL_NONE,
GridConstraints.SIZEPOLICY_FIXED,
GridConstraints.SIZEPOLICY_FIXED,
null,
new Dimension(195, 16),
null,
0,
false));
depthIncLabel = new JLabel("Depth Increment (meter): ");
batchInputPanel.add(
depthIncLabel,
new GridConstraints(
5,
0,
1,
1,
GridConstraints.ANCHOR_WEST,
GridConstraints.FILL_NONE,
GridConstraints.SIZEPOLICY_FIXED,
GridConstraints.SIZEPOLICY_FIXED,
null,
new Dimension(195, 16),
null,
0,
false));
dpiXField = new JTextField();
dpiXField.setEnabled(false);
dpiXField.setHorizontalAlignment(11);
dpiYField = new JTextField();
dpiYField.setEnabled(false);
dpiYField.setHorizontalAlignment(11);
batchInputPanel.add(
dpiXField,
new GridConstraints(
2,
1,
1,
1,
GridConstraints.ANCHOR_WEST,
GridConstraints.FILL_HORIZONTAL,
GridConstraints.SIZEPOLICY_WANT_GROW,
GridConstraints.SIZEPOLICY_FIXED,
null,
new Dimension(100, -1),
null,
0,
false));
batchInputPanel.add(
dpiYField,
new GridConstraints(
3,
1,
1,
1,
GridConstraints.ANCHOR_WEST,
GridConstraints.FILL_HORIZONTAL,
GridConstraints.SIZEPOLICY_WANT_GROW,
GridConstraints.SIZEPOLICY_FIXED,
null,
new Dimension(100, -1),
null,
0,
false));
startDepthField = new JTextField();
startDepthField.setEnabled(false);
startDepthField.setHorizontalAlignment(11);
batchInputPanel.add(
startDepthField,
new GridConstraints(
4,
1,
1,
1,
GridConstraints.ANCHOR_WEST,
GridConstraints.FILL_HORIZONTAL,
GridConstraints.SIZEPOLICY_WANT_GROW,
GridConstraints.SIZEPOLICY_FIXED,
null,
new Dimension(100, -1),
null,
0,
false));
depthIncField = new JTextField();
depthIncField.setEnabled(false);
depthIncField.setHorizontalAlignment(11);
batchInputPanel.add(
depthIncField,
new GridConstraints(
5,
1,
1,
1,
GridConstraints.ANCHOR_WEST,
GridConstraints.FILL_HORIZONTAL,
GridConstraints.SIZEPOLICY_WANT_GROW,
GridConstraints.SIZEPOLICY_FIXED,
null,
new Dimension(100, -1),
null,
0,
false));
final JPanel applyPanel = new JPanel();
applyPanel.setLayout(new GridLayoutManager(1, 2, new Insets(0, 0, 0, 0), -1, -1));
batchInputPanel.add(
applyPanel,
new GridConstraints(
6,
0,
1,
2,
GridConstraints.ANCHOR_CENTER,
GridConstraints.FILL_BOTH,
GridConstraints.SIZEPOLICY_CAN_SHRINK | GridConstraints.SIZEPOLICY_CAN_GROW,
GridConstraints.SIZEPOLICY_CAN_SHRINK | GridConstraints.SIZEPOLICY_CAN_GROW,
null,
null,
null,
0,
false));
applyToAllButton = new JButton("Apply to All Rows");
applyToAllButton.setEnabled(false);
applyPanel.add(
applyToAllButton,
new GridConstraints(
0,
1,
1,
1,
GridConstraints.ANCHOR_CENTER,
GridConstraints.FILL_HORIZONTAL,
GridConstraints.SIZEPOLICY_CAN_SHRINK | GridConstraints.SIZEPOLICY_CAN_GROW,
GridConstraints.SIZEPOLICY_FIXED,
null,
null,
null,
0,
false));
applyToSelectedButton = new JButton("Apply to Selected Rows");
applyToSelectedButton.setEnabled(false);
applyPanel.add(
applyToSelectedButton,
new GridConstraints(
0,
0,
1,
1,
GridConstraints.ANCHOR_CENTER,
GridConstraints.FILL_HORIZONTAL,
GridConstraints.SIZEPOLICY_CAN_SHRINK | GridConstraints.SIZEPOLICY_CAN_GROW,
GridConstraints.SIZEPOLICY_FIXED,
null,
null,
null,
0,
false));
// final Spacer spacer4 = new Spacer();
// applyPanel.add(spacer4, new GridConstraints(0, 0, 1, 1, GridConstraints.ANCHOR_CENTER,
// GridConstraints.FILL_HORIZONTAL,
// GridConstraints.SIZEPOLICY_WANT_GROW, 1, null, null, null, 0, false));
orientationComboBox = new JComboBox();
orientationComboBox.setEnabled(false);
final DefaultComboBoxModel defaultComboBoxModel1 = new DefaultComboBoxModel();
defaultComboBoxModel1.addElement("Horizontal");
defaultComboBoxModel1.addElement("Vertical");
defaultComboBoxModel1.addElement("[Blank]");
orientationComboBox.setModel(defaultComboBoxModel1);
orientationComboBox.setSelectedIndex(2); // [Blank]
batchInputPanel.add(
orientationComboBox,
new GridConstraints(
0,
1,
1,
1,
GridConstraints.ANCHOR_WEST,
GridConstraints.FILL_HORIZONTAL,
GridConstraints.SIZEPOLICY_CAN_GROW,
GridConstraints.SIZEPOLICY_FIXED,
null,
null,
null,
0,
false));
lengthLabel = new JLabel("Length (meter): ");
batchInputPanel.add(
lengthLabel,
new GridConstraints(
1,
0,
1,
1,
GridConstraints.ANCHOR_WEST,
GridConstraints.FILL_NONE,
GridConstraints.SIZEPOLICY_FIXED,
GridConstraints.SIZEPOLICY_FIXED,
null,
null,
null,
0,
false));
lengthField = new JTextField();
lengthField.setEnabled(false);
lengthField.setHorizontalAlignment(11);
batchInputPanel.add(
lengthField,
new GridConstraints(
1,
1,
1,
1,
GridConstraints.ANCHOR_WEST,
GridConstraints.FILL_HORIZONTAL,
GridConstraints.SIZEPOLICY_WANT_GROW,
GridConstraints.SIZEPOLICY_FIXED,
null,
new Dimension(150, -1),
null,
0,
false));
orientationLabel = new JLabel("Orientation: ");
batchInputPanel.add(
orientationLabel,
new GridConstraints(
0,
0,
1,
1,
GridConstraints.ANCHOR_WEST,
GridConstraints.FILL_NONE,
GridConstraints.SIZEPOLICY_FIXED,
GridConstraints.SIZEPOLICY_FIXED,
null,
new Dimension(195, 16),
null,
0,
false));
useBatchInputCheckbox = new JCheckBox();
useBatchInputCheckbox.setText("Batch input: blank fields will not be applied");
this.add(
useBatchInputCheckbox,
new GridConstraints(
1,
0,
1,
1,
GridConstraints.ANCHOR_WEST,
GridConstraints.FILL_NONE,
GridConstraints.SIZEPOLICY_CAN_SHRINK | GridConstraints.SIZEPOLICY_CAN_GROW,
GridConstraints.SIZEPOLICY_FIXED,
null,
null,
null,
0,
false));
onBatch();
}
public void setEnabled(boolean enabled) {
super.setEnabled(enabled);
positionChrTop.setEnabled(enabled);
positionChrLeft.setEnabled(enabled);
goButton.setEnabled(enabled);
}
/** Called for button presses and checkbox toggles. */
public void actionPerformed(ActionEvent e) {
Object src = e.getSource();
// the source of the event is the add files button
// so we need to let the user add some files!
if (src == addFiles) {
// create an appropriate file chooser
JFileChooser myTempFileChooser = new JFileChooser((new File("")).getAbsolutePath());
myTempFileChooser.setMultiSelectionEnabled(true);
myTempFileChooser.setFileSelectionMode(JFileChooser.FILES_ONLY);
myTempFileChooser.setDialogType(JFileChooser.OPEN_DIALOG);
myTempFileChooser.setFileHidingEnabled(true);
// open the file chooser and get the user's selctions
int returnCode = myTempFileChooser.showOpenDialog(this);
// use the return info to add files if the
// user selected any in the file chooser
if (returnCode == JFileChooser.APPROVE_OPTION) {
// grab the files the user selected
File[] selectedFiles = myTempFileChooser.getSelectedFiles();
// pull the files into the list
changeFilesInList.importFileData(list, selectedFiles);
}
}
// the source of the event was the process button
else if (src == process) {
if (((DefaultListModel) list.getModel()).size() == 0) return;
setComponentsEnabled(false);
final ThumbMaker tm = this;
Thread t =
new Thread(
new Runnable() {
public void run() {
tm.process();
setComponentsEnabled(true);
}
});
t.start();
// because we can't do it on quit, we are going to save
// all the preference values when the user processes a set
// of images
savePreferences();
}
// the source of the event was the remove button
else if (src == remove) {
DefaultListModel model = (DefaultListModel) list.getModel();
while (true) {
int ndx = list.getSelectedIndex();
if (ndx < 0) break;
model.removeElementAt(ndx);
}
}
// the source of the event was the preserve aspect check box
else if (src == aspect) {
boolean b = aspect.isSelected();
colorLabel.setEnabled(b);
colorBox.setEnabled(b);
redLabel.setEnabled(b);
red.setEnabled(b);
redValue.setEnabled(b);
greenLabel.setEnabled(b);
green.setEnabled(b);
greenValue.setEnabled(b);
blueLabel.setEnabled(b);
blue.setEnabled(b);
blueValue.setEnabled(b);
}
// the source of the event is the "..." button,
// we need to let the user select a destination file
else if (src == dotDotDot) {
// create an appropriate file chooser
JFileChooser myTempFileChooser =
new JFileChooser(new File(output.getText()).getAbsolutePath());
myTempFileChooser.setMultiSelectionEnabled(false);
myTempFileChooser.setFileSelectionMode(JFileChooser.DIRECTORIES_ONLY);
myTempFileChooser.setDialogType(JFileChooser.OPEN_DIALOG);
myTempFileChooser.setFileHidingEnabled(true);
// open the file chooser and get the user's selctions
int returnCode = myTempFileChooser.showOpenDialog(this);
// use the return info to set the directory if the
// user selected one in the file chooser
if (returnCode == JFileChooser.APPROVE_OPTION) {
// grab the file the user selected
File selectedFile = myTempFileChooser.getSelectedFile();
// stuff the file path into the text field
output.setText(selectedFile.getAbsolutePath());
}
}
}
public void setEnabled(boolean enabled) {
myTable.setEnabled(enabled);
super.setEnabled(enabled);
}
public void initializeMainView(
final SuperAdapter superAdapter,
Container contentPane,
Dimension bigPanelDim,
Dimension panelDim) {
contentPane.setLayout(new BorderLayout());
final JPanel mainPanel = new JPanel();
mainPanel.setLayout(new BorderLayout());
contentPane.add(mainPanel, BorderLayout.CENTER);
mainPanel.setBackground(Color.white);
final JPanel toolbarPanel = new JPanel();
toolbarPanel.setBorder(null);
toolbarPanel.setLayout(new GridBagLayout());
mainPanel.add(toolbarPanel, BorderLayout.NORTH);
JPanel bigPanel = new JPanel();
bigPanel.setLayout(new BorderLayout());
bigPanel.setBackground(Color.white);
bigPanel.setPreferredSize(new Dimension(bigPanelDim));
bigPanel.setMaximumSize(new Dimension(bigPanelDim));
bigPanel.setMinimumSize(new Dimension(bigPanelDim));
JPanel bottomPanel = new JPanel();
bottomPanel.setBackground(Color.white);
JMenuBar menuBar = null;
try {
menuBar = superAdapter.createMenuBar();
} catch (Exception e) {
e.printStackTrace();
}
assert menuBar != null;
contentPane.add(menuBar, BorderLayout.NORTH);
GridBagConstraints toolbarConstraints = new GridBagConstraints();
toolbarConstraints.anchor = GridBagConstraints.LINE_START;
toolbarConstraints.fill = GridBagConstraints.HORIZONTAL;
toolbarConstraints.gridx = 0;
toolbarConstraints.gridy = 0;
toolbarConstraints.weightx = 0.1;
// --- Chromosome panel ---
JPanel chrSelectionPanel = new JPanel();
toolbarPanel.add(chrSelectionPanel, toolbarConstraints);
chrSelectionPanel.setBorder(LineBorder.createGrayLineBorder());
chrSelectionPanel.setLayout(new BorderLayout());
JPanel chrLabelPanel = new JPanel();
JLabel chrLabel = new JLabel("Chromosomes");
chrLabel.setHorizontalAlignment(SwingConstants.CENTER);
chrLabelPanel.setBackground(HiCGlobals.backgroundColor);
chrLabelPanel.setLayout(new BorderLayout());
chrLabelPanel.add(chrLabel, BorderLayout.CENTER);
chrSelectionPanel.add(chrLabelPanel, BorderLayout.PAGE_START);
JPanel chrButtonPanel = new JPanel();
chrButtonPanel.setBackground(new Color(238, 238, 238));
chrButtonPanel.setLayout(new BoxLayout(chrButtonPanel, BoxLayout.X_AXIS));
// ---- chrBox1 ----
chrBox1 = new JComboBox<Chromosome>();
chrBox1.setModel(
new DefaultComboBoxModel<Chromosome>(new Chromosome[] {new Chromosome(0, "All", 0)}));
chrBox1.addActionListener(
new ActionListener() {
public void actionPerformed(ActionEvent e) {
chrBox1ActionPerformed(e);
}
});
chrBox1.setPreferredSize(new Dimension(95, 70));
chrButtonPanel.add(chrBox1);
// ---- chrBox2 ----
chrBox2 = new JComboBox<Chromosome>();
chrBox2.setModel(
new DefaultComboBoxModel<Chromosome>(new Chromosome[] {new Chromosome(0, "All", 0)}));
chrBox2.addActionListener(
new ActionListener() {
public void actionPerformed(ActionEvent e) {
chrBox2ActionPerformed(e);
}
});
chrBox2.setPreferredSize(new Dimension(95, 70));
chrButtonPanel.add(chrBox2);
// ---- refreshButton ----
refreshButton = new JideButton();
refreshButton.setIcon(
new ImageIcon(getClass().getResource("/toolbarButtonGraphics/general/Refresh24.gif")));
refreshButton.addActionListener(
new ActionListener() {
public void actionPerformed(ActionEvent e) {
superAdapter.safeRefreshButtonActionPerformed();
}
});
refreshButton.setPreferredSize(new Dimension(24, 24));
chrButtonPanel.add(refreshButton);
chrBox1.setEnabled(false);
chrBox2.setEnabled(false);
refreshButton.setEnabled(false);
chrSelectionPanel.add(chrButtonPanel, BorderLayout.CENTER);
chrSelectionPanel.setMinimumSize(new Dimension(200, 70));
chrSelectionPanel.setPreferredSize(new Dimension(210, 70));
// ======== Display Option Panel ========
JPanel displayOptionPanel = new JPanel();
displayOptionPanel.setBackground(new Color(238, 238, 238));
displayOptionPanel.setBorder(LineBorder.createGrayLineBorder());
displayOptionPanel.setLayout(new BorderLayout());
JPanel displayOptionLabelPanel = new JPanel();
displayOptionLabelPanel.setBackground(HiCGlobals.backgroundColor);
displayOptionLabelPanel.setLayout(new BorderLayout());
JLabel displayOptionLabel = new JLabel("Show");
displayOptionLabel.setHorizontalAlignment(SwingConstants.CENTER);
displayOptionLabelPanel.add(displayOptionLabel, BorderLayout.CENTER);
displayOptionPanel.add(displayOptionLabelPanel, BorderLayout.PAGE_START);
JPanel displayOptionButtonPanel = new JPanel();
displayOptionButtonPanel.setBorder(new EmptyBorder(0, 10, 0, 10));
displayOptionButtonPanel.setLayout(new GridLayout(1, 0, 20, 0));
displayOptionComboBox = new JComboBox<MatrixType>();
displayOptionComboBox.setModel(
new DefaultComboBoxModel<MatrixType>(new MatrixType[] {MatrixType.OBSERVED}));
displayOptionComboBox.addActionListener(
new ActionListener() {
public void actionPerformed(ActionEvent e) {
superAdapter.safeDisplayOptionComboBoxActionPerformed();
normalizationComboBox.setEnabled(!isWholeGenome());
}
});
displayOptionButtonPanel.add(displayOptionComboBox);
displayOptionPanel.add(displayOptionButtonPanel, BorderLayout.CENTER);
displayOptionPanel.setMinimumSize(new Dimension(140, 70));
displayOptionPanel.setPreferredSize(new Dimension(140, 70));
displayOptionPanel.setMaximumSize(new Dimension(140, 70));
toolbarConstraints.gridx = 1;
toolbarConstraints.weightx = 0.1;
toolbarPanel.add(displayOptionPanel, toolbarConstraints);
displayOptionComboBox.setEnabled(false);
// ======== Normalization Panel ========
JPanel normalizationPanel = new JPanel();
normalizationPanel.setBackground(new Color(238, 238, 238));
normalizationPanel.setBorder(LineBorder.createGrayLineBorder());
normalizationPanel.setLayout(new BorderLayout());
JPanel normalizationLabelPanel = new JPanel();
normalizationLabelPanel.setBackground(HiCGlobals.backgroundColor);
normalizationLabelPanel.setLayout(new BorderLayout());
JLabel normalizationLabel = new JLabel("Normalization");
normalizationLabel.setHorizontalAlignment(SwingConstants.CENTER);
normalizationLabelPanel.add(normalizationLabel, BorderLayout.CENTER);
normalizationPanel.add(normalizationLabelPanel, BorderLayout.PAGE_START);
JPanel normalizationButtonPanel = new JPanel();
normalizationButtonPanel.setBorder(new EmptyBorder(0, 10, 0, 10));
normalizationButtonPanel.setLayout(new GridLayout(1, 0, 20, 0));
normalizationComboBox = new JComboBox<String>();
normalizationComboBox.setModel(
new DefaultComboBoxModel<String>(new String[] {NormalizationType.NONE.getLabel()}));
normalizationComboBox.addActionListener(
new ActionListener() {
public void actionPerformed(ActionEvent e) {
superAdapter.safeNormalizationComboBoxActionPerformed(e);
}
});
normalizationButtonPanel.add(normalizationComboBox);
normalizationPanel.add(normalizationButtonPanel, BorderLayout.CENTER);
normalizationPanel.setPreferredSize(new Dimension(180, 70));
normalizationPanel.setMinimumSize(new Dimension(140, 70));
toolbarConstraints.gridx = 2;
toolbarConstraints.weightx = 0.1;
toolbarPanel.add(normalizationPanel, toolbarConstraints);
normalizationComboBox.setEnabled(false);
// ======== Resolution Panel ========
hiCPanel = new JPanel();
hiCPanel.setBackground(Color.white);
hiCPanel.setLayout(new HiCLayout());
bigPanel.add(hiCPanel, BorderLayout.CENTER);
JPanel wrapGapPanel = new JPanel();
wrapGapPanel.setBackground(Color.white);
wrapGapPanel.setMaximumSize(new Dimension(5, 5));
wrapGapPanel.setMinimumSize(new Dimension(5, 5));
wrapGapPanel.setPreferredSize(new Dimension(5, 5));
wrapGapPanel.setBorder(LineBorder.createBlackLineBorder());
bigPanel.add(wrapGapPanel, BorderLayout.EAST);
// splitPanel.insertPane(hiCPanel, 0);
// splitPanel.setBackground(Color.white);
// ---- rulerPanel2 ----
JPanel topPanel = new JPanel();
topPanel.setBackground(Color.green);
topPanel.setLayout(new BorderLayout());
hiCPanel.add(topPanel, BorderLayout.NORTH);
trackLabelPanel = new TrackLabelPanel(superAdapter.getHiC());
trackLabelPanel.setBackground(Color.white);
hiCPanel.add(trackLabelPanel, HiCLayout.NORTH_WEST);
trackPanelX = new TrackPanel(superAdapter, superAdapter.getHiC(), TrackPanel.Orientation.X);
trackPanelX.setMaximumSize(new Dimension(4000, 50));
trackPanelX.setPreferredSize(new Dimension(1, 50));
trackPanelX.setMinimumSize(new Dimension(1, 50));
trackPanelX.setVisible(false);
topPanel.add(trackPanelX, BorderLayout.NORTH);
rulerPanelX = new HiCRulerPanel(superAdapter.getHiC());
rulerPanelX.setMaximumSize(new Dimension(4000, 50));
rulerPanelX.setMinimumSize(new Dimension(1, 50));
rulerPanelX.setPreferredSize(new Dimension(1, 50));
rulerPanelX.setBorder(null);
topPanel.add(rulerPanelX, BorderLayout.SOUTH);
// ---- rulerPanel1 ----
JPanel leftPanel = new JPanel();
leftPanel.setBackground(Color.white);
leftPanel.setLayout(new BorderLayout());
hiCPanel.add(leftPanel, BorderLayout.WEST);
trackPanelY = new TrackPanel(superAdapter, superAdapter.getHiC(), TrackPanel.Orientation.Y);
trackPanelY.setMaximumSize(new Dimension(50, 4000));
trackPanelY.setPreferredSize(new Dimension(50, 1));
trackPanelY.setMinimumSize(new Dimension(50, 1));
trackPanelY.setVisible(false);
leftPanel.add(trackPanelY, BorderLayout.WEST);
rulerPanelY = new HiCRulerPanel(superAdapter.getHiC());
rulerPanelY.setMaximumSize(new Dimension(50, 4000));
rulerPanelY.setPreferredSize(new Dimension(50, 800));
rulerPanelY.setBorder(null);
rulerPanelY.setMinimumSize(new Dimension(50, 1));
leftPanel.add(rulerPanelY, BorderLayout.EAST);
// ---- heatmapPanel ----
// Dimension screenDimension = Toolkit.getDefaultToolkit().getScreenSize();
// int panelSize = screenDimension.height - 210;
int panelWidth = (int) panelDim.getWidth();
int panelHeight = (int) panelDim.getHeight();
System.err.println("Window W: " + panelWidth + " H" + panelHeight);
JPanel wrapHeatmapPanel = new JPanel(new BorderLayout());
wrapHeatmapPanel.setMaximumSize(new Dimension(panelDim));
wrapHeatmapPanel.setMinimumSize(new Dimension(panelDim));
wrapHeatmapPanel.setPreferredSize(new Dimension(panelDim));
wrapHeatmapPanel.setBackground(Color.BLUE);
wrapHeatmapPanel.setVisible(true);
heatmapPanel = new HeatmapPanel(superAdapter);
heatmapPanel.setMaximumSize(new Dimension(panelWidth - 5, panelHeight - 5));
heatmapPanel.setMinimumSize(new Dimension(panelWidth - 5, panelHeight - 5));
heatmapPanel.setPreferredSize(new Dimension(panelWidth - 5, panelHeight - 5));
heatmapPanel.setBackground(Color.white);
wrapHeatmapPanel.add(heatmapPanel, BorderLayout.CENTER);
// hiCPanel.setMaximumSize(new Dimension(panelWidth, panelHeight));
// hiCPanel.setMinimumSize(new Dimension(panelWidth, panelHeight));
// hiCPanel.setPreferredSize(new Dimension(panelWidth, panelHeight));
hiCPanel.add(wrapHeatmapPanel, BorderLayout.CENTER);
// ======== Resolution Slider Panel ========
// Resolution panel
resolutionSlider = new ResolutionControl(superAdapter);
resolutionSlider.setPreferredSize(new Dimension(200, 70));
resolutionSlider.setMinimumSize(new Dimension(150, 70));
toolbarConstraints.gridx = 3;
toolbarConstraints.weightx = 0.1;
toolbarPanel.add(resolutionSlider, toolbarConstraints);
// ======== Color Range Panel ========
colorRangePanel = new JColorRangePanel(superAdapter, heatmapPanel, preDefMapColor);
toolbarConstraints.gridx = 4;
toolbarConstraints.weightx = 0.5;
toolbarPanel.add(colorRangePanel, toolbarConstraints);
goPanel = new GoToPanel(superAdapter);
toolbarConstraints.gridx = 5;
toolbarConstraints.weightx = 0.25;
toolbarPanel.add(goPanel, toolbarConstraints);
// not sure this is working
// toolbarPanel.setPreferredSize(new Dimension(panelHeight,100));
toolbarPanel.setEnabled(false);
// ======== Right side panel ========
JPanel rightSidePanel = new JPanel(new BorderLayout()); // (new BorderLayout());
rightSidePanel.setBackground(Color.white);
rightSidePanel.setPreferredSize(new Dimension(210, 1000));
rightSidePanel.setMaximumSize(new Dimension(10000, 10000));
// ======== Bird's view mini map ========
JPanel thumbPanel = new JPanel();
thumbPanel.setLayout(new BorderLayout());
// ---- thumbnailPanel ----
thumbnailPanel = new ThumbnailPanel(superAdapter);
thumbnailPanel.setBackground(Color.white);
thumbnailPanel.setMaximumSize(new Dimension(210, 210));
thumbnailPanel.setMinimumSize(new Dimension(210, 210));
thumbnailPanel.setPreferredSize(new Dimension(210, 210));
// JPanel gapPanel = new JPanel();
// gapPanel.setMaximumSize(new Dimension(1, 1));
// rightSidePanel.add(gapPanel,BorderLayout.WEST);
thumbPanel.add(thumbnailPanel, BorderLayout.CENTER);
thumbPanel.setBackground(Color.white);
rightSidePanel.add(thumbPanel, BorderLayout.NORTH);
// ========= mouse hover text ======
JPanel tooltipPanel = new JPanel(new BorderLayout());
tooltipPanel.setBackground(Color.white);
tooltipPanel.setPreferredSize(new Dimension(210, 490));
mouseHoverTextPanel = new JEditorPane();
mouseHoverTextPanel.setEditable(false);
mouseHoverTextPanel.setContentType("text/html");
mouseHoverTextPanel.setFont(new Font("sans-serif", 0, 20));
mouseHoverTextPanel.setBackground(Color.white);
mouseHoverTextPanel.setBorder(null);
int mouseTextY = rightSidePanel.getBounds().y + rightSidePanel.getBounds().height;
// *Dimension prefSize = new Dimension(210, 490);
Dimension prefSize = new Dimension(210, 390);
mouseHoverTextPanel.setPreferredSize(prefSize);
JScrollPane tooltipScroller = new JScrollPane(mouseHoverTextPanel);
tooltipScroller.setBackground(Color.white);
tooltipScroller.setBorder(null);
tooltipPanel.setPreferredSize(new Dimension(210, 500));
tooltipPanel.add(tooltipScroller);
tooltipPanel.setBounds(new Rectangle(new Point(0, mouseTextY), prefSize));
tooltipPanel.setBackground(Color.white);
tooltipPanel.setBorder(null);
rightSidePanel.add(tooltipPanel, BorderLayout.CENTER);
// compute preferred size
Dimension preferredSize = new Dimension();
for (int i = 0; i < rightSidePanel.getComponentCount(); i++) {
Rectangle bounds = rightSidePanel.getComponent(i).getBounds();
preferredSize.width = Math.max(bounds.x + bounds.width, preferredSize.width);
preferredSize.height = Math.max(bounds.y + bounds.height, preferredSize.height);
}
Insets insets = rightSidePanel.getInsets();
preferredSize.width += insets.right + 20;
preferredSize.height += insets.bottom;
rightSidePanel.setMinimumSize(preferredSize);
rightSidePanel.setPreferredSize(preferredSize);
mainPanel.add(bigPanel, BorderLayout.CENTER);
mainPanel.add(rightSidePanel, BorderLayout.EAST);
}
@Override
public void setEnabled(boolean enabled) {
super.setEnabled(enabled);
this.setEnabledRecursive(this, enabled);
}