/**
* Convert from an entity to a map.
*
* @param entity the entity to convert
* @return a map containing the entity's fields (and history is required)
*/
public Map<String, Object> convertEntity(Entity entity) {
Map<String, Object> map = Maps.newHashMap();
convertFeatures(map, entity);
if (outputHistory && documentHistory != null) {
Collection<HistoryEvent> events = documentHistory.getHistory(entity.getInternalId());
convertHistory(map, events, entity.getInternalId());
}
putIfExists(map, fields.getExternalId(), entity.getExternalId());
return map;
}
@Override
public void doProcess(JCas aJCas) throws AnalysisEngineProcessException {
List<Entity> toRemove = new ArrayList<Entity>();
FSIterator<Annotation> iter = aJCas.getAnnotationIndex(Entity.type).iterator();
while (iter.hasNext()) {
Entity e = (Entity) iter.next();
if (e.getConfidence() < confidenceThreshold
&& (!ignoreZeroConfidence || e.getConfidence() > 0.0)) {
toRemove.add(e);
getMonitor()
.debug(
"Low confidence entity found (ID: {}) - this entity will be removed",
e.getInternalId());
}
}
removeFromJCasIndex(toRemove);
}