// single file
  private Grib2CollectionBuilder(MFile file, FeatureCollectionConfig.GribConfig config, Formatter f)
      throws IOException {
    this.isSingleFile = true;
    try {
      // String spec = StringUtil2.substitute(file.getPath(), "\\", "/");
      CollectionManager dcm = new CollectionManagerSingleFile(file);
      if (config != null) dcm.putAuxInfo(FeatureCollectionConfig.AUX_GRIB_CONFIG, config);
      this.collections.add(dcm);
      this.gc = new Grib2Collection(file.getName(), new File(dcm.getRoot()), config);

    } catch (Exception e) {
      ByteArrayOutputStream bos = new ByteArrayOutputStream(10000);
      e.printStackTrace(new PrintStream(bos));
      f.format("%s", bos.toString());
      throw new IOException(e);
    }
  }
  // read all records in all files,
  // divide into groups based on GDS hash
  // each group has an arraylist of all records that belong to it.
  // for each group, run rectlizer to derive the coordinates and variables
  public List<Group> makeAggregatedGroups(
      ArrayList<String> filenames, CollectionManager.Force force, Formatter f) throws IOException {
    Map<Integer, Group> gdsMap = new HashMap<Integer, Group>();

    f.format("GribCollection %s: makeAggregatedGroups%n", gc.getName());
    int total = 0;
    int fileno = 0;
    for (CollectionManager dcm : collections) {
      // dcm.scanIfNeeded(); // LOOK ??
      f.format(" dcm= %s%n", dcm);
      Map<Integer, Integer> gdsConvert = (Map<Integer, Integer>) dcm.getAuxInfo("gdsHash");

      for (MFile mfile : dcm.getFiles()) {
        // f.format("%3d: %s%n", fileno, mfile.getPath());
        filenames.add(mfile.getPath());

        Grib2Index index = new Grib2Index();
        try {
          if (!index.readIndex(
              mfile.getPath(),
              mfile.getLastModified(),
              force)) { // heres where the index date is checked against the data file
            index.makeIndex(mfile.getPath(), f);
            f.format(
                "  Index written: %s == %d records %n",
                mfile.getName() + Grib2Index.IDX_EXT, index.getRecords().size());
          } else if (debug) {
            f.format(
                "  Index read: %s == %d records %n",
                mfile.getName() + Grib2Index.IDX_EXT, index.getRecords().size());
          }
        } catch (IOException ioe) {
          f.format(
              "GribCollectionBuilder: reading/Creating gbx9 index failed err=%s%n  skipping %s%n",
              ioe.getMessage(), mfile.getPath() + Grib2Index.IDX_EXT);
          continue;
        }

        for (Grib2Record gr : index.getRecords()) {
          gr.setFile(fileno); // each record tracks which file it belongs to
          int gdsHash =
              gr.getGDSsection().getGDS().hashCode(); // use GDS hash code to group records
          if (gdsConvert != null
              && gdsConvert.get(gdsHash)
                  != null) { // allow external config to muck with gdsHash. Why? because of error in
            // encoding
            gdsHash = (Integer) gdsConvert.get(gdsHash); // and we need exact hash matching
          }

          Group g = gdsMap.get(gdsHash);
          if (g == null) {
            g = new Group(gr.getGDSsection(), gdsHash);
            gdsMap.put(gdsHash, g);
          }
          g.records.add(gr);
          total++;
        }
        fileno++;
      }
    }
    f.format(" total grib records= %d%n", total);

    Grib2Rectilyser.Counter c = new Grib2Rectilyser.Counter();
    List<Group> result = new ArrayList<Group>(gdsMap.values());
    for (Group g : result) {
      g.rect = new Grib2Rectilyser(g.records, g.gdsHash);
      f.format(" GDS hash %d == ", g.gdsHash);
      g.rect.make(f, c);
    }
    f.format(
        " Rectilyser: nvars=%d records unique=%d total=%d dups=%d (%f) %n",
        c.vars, c.recordsUnique, c.records, c.dups, ((float) c.dups) / c.records);

    return result;
  }
 public Date getDate(MFile mfile) {
   if (useName)
     return DateFromString.getDateUsingDemarkatedCount(mfile.getName(), dateFormatMark, '#');
   else return DateFromString.getDateUsingDemarkatedMatch(mfile.getPath(), dateFormatMark, '#');
 }
示例#4
0
 public boolean accept(MFile dataset) {
   java.util.regex.Matcher matcher = this.pattern.matcher(dataset.getName());
   return matcher.matches();
 }
示例#5
0
 public boolean accept(MFile mfile) {
   java.util.regex.Matcher matcher = this.pattern.matcher(mfile.getName());
   return matcher.matches();
 }