public GraphVisualisation(rndalg.Graph graphToShow, Vector<Vertex> cut) {
super();
Graph displayed = new Graph(false);
displayed.addColumn("id", String.class);
displayed.addColumn("isCut", Boolean.class);
this.makeGraph(displayed, graphToShow, cut);
this.addGraph("graph", displayed);
LabelRenderer r = new LabelRenderer("id");
r.setRoundedCorner(10, 10);
r.setHorizontalPadding(5);
r.setVerticalPadding(2);
this.setRendererFactory(new DefaultRendererFactory(r));
ActionList layoutActions = new ActionList(Activity.INFINITY);
ForceDirectedLayout layout = new ForceDirectedLayout("graph");
layoutActions.add(layout);
layoutActions.add(new RepaintAction());
// black text
ColorAction textCA =
new ColorAction("graph.nodes", VisualItem.TEXTCOLOR, ColorLib.rgb(0, 0, 0));
// black edges
// ColorAction edgeCA = new ColorAction("graph.edges", VisualItem.STROKECOLOR,
// ColorLib.rgb(0,0,0));
// edges
ColorAction edgeCA =
new ColorAction(
"graph.edges",
ExpressionParser.predicate("isCut = false"),
VisualItem.STROKECOLOR,
ColorLib.rgb(0, 0, 0));
ColorAction edgeCutCA =
new ColorAction(
"graph.edges",
ExpressionParser.predicate("isCut = true"),
VisualItem.STROKECOLOR,
ColorLib.rgb(255, 0, 0));
// concatenate the color actions
ActionList colorActions = new ActionList();
colorActions.add(textCA);
colorActions.add(edgeCA);
colorActions.add(edgeCutCA);
this.putAction("draw", colorActions);
this.putAction("layout", layoutActions);
this.runAfter("draw", "layout");
this.run("draw");
}
/**
* To be called when the visibility filtering predicate changes.
*
* @param predStr string representation of the predicate on which to filter document visibility,
* or "" if no filtering should be applied
*/
public void resetDocsVisiblePredicate(String predStr) {
if (!predStr.equals("")) {
docGlyphVisiblePredicate =
new AndPredicate(new InGroupPredicate(DATA_GROUP), ExpressionParser.predicate(predStr));
} else {
docGlyphVisiblePredicate = new InGroupPredicate(DATA_GROUP);
}
if (docGlyphVisibleFilter != null) {
docGlyphVisibleFilter.updatePredicate(docGlyphVisiblePredicate);
}
// m_vis.run("repaint");
m_vis.run("updateOnce");
}
public Display getGraphDisplay(
GraphLayoutType glType, final ExperimentPanel expPanel, String highlightName) {
Display display = new Display();
int X = expPanel.getDetailWidth();
int Y = expPanel.getDetailHeight();
display.setSize(X, Y); // set display size
// display.setHighQuality(true);
// display.setPreferredSize(new Dimension(600,600));
display.addControlListener(new DragControl()); // drag items around
display.addControlListener(new PanControl()); // pan with background left-drag
display.addControlListener(new WheelZoomControl()); // zoom with vertical right-drag
display.addControlListener(
new ZoomToFitControl(Visualization.ALL_ITEMS, 50, 500, Control.MIDDLE_MOUSE_BUTTON));
display.addControlListener(new NeighborHighlightControl());
Visualization vis = new Visualization();
if (clusterGraph == null) {
clusterGraph = this.toGraph();
}
vis.add("graph", clusterGraph);
LabelRenderer r = new LabelRenderer("name");
r.setHorizontalAlignment(Constants.CENTER);
// r.setRoundedCorner(8, 8); // round the corners
DefaultRendererFactory rf = new DefaultRendererFactory(r);
rf.setDefaultEdgeRenderer(new EdgeRenderer(Constants.EDGE_TYPE_CURVE));
vis.setRendererFactory(rf);
int[] palette = new int[] {ColorLib.rgb(255, 180, 180), ColorLib.rgb(190, 190, 255)};
DataColorAction fill =
new DataColorAction(
"graph.nodes", "type", Constants.NOMINAL, VisualItem.FILLCOLOR, palette);
fill.add(VisualItem.FIXED, ColorLib.rgb(255, 100, 100));
fill.add(VisualItem.HIGHLIGHT, ColorLib.rgb(255, 200, 125));
int[] text_palette = new int[] {ColorLib.gray(0), ColorLib.gray(255)};
DataColorAction text =
new DataColorAction(
"graph.nodes",
"indeterminate",
Constants.NUMERICAL,
VisualItem.TEXTCOLOR,
text_palette);
// ColorAction text = new ColorAction("graph.nodes", VisualItem.TEXTCOLOR, ColorLib.gray(0));
ColorAction edges = new ColorAction("graph.edges", VisualItem.STROKECOLOR, ColorLib.gray(200));
ActionList color = new ActionList(Activity.INFINITY);
color.add(text);
color.add(fill);
color.add(edges);
color.add(new RepaintAction());
if (highlightName != null) {
String pred = "name='" + highlightName + "'";
Iterator iter = vis.items("graph.nodes", ExpressionParser.predicate(pred));
while (iter.hasNext()) {
NodeItem ni = (NodeItem) iter.next();
highlightedItem = ni;
ni.setFixed(true);
Iterator iterEdge = ni.edges();
while (iterEdge.hasNext()) {
EdgeItem eItem = (EdgeItem) iterEdge.next();
NodeItem nItem = eItem.getAdjacentItem(ni);
if (eItem.isVisible()) {
eItem.setHighlighted(true);
nItem.setHighlighted(true);
}
}
}
}
ActionList layout = new ActionList();
switch (glType) {
case BALLOON_TREE:
layout.add(new BalloonTreeLayout("graph"));
break;
case FORCE_DIRECTED:
layout = new ActionList(Activity.INFINITY);
layout.add(new ForceDirectedLayout("graph"));
break;
case NODE_LINK_TREE:
layout.add(new NodeLinkTreeLayout("graph"));
break;
case RADIAL_TREE:
layout.add(new RadialTreeLayout("graph"));
break;
}
// layout.add(fill);
layout.add(new RepaintAction());
vis.putAction("color", color);
vis.putAction("layout", layout);
display.setVisualization(vis);
vis.run("color");
vis.run("layout");
// Rectangle2D bounds = vis.getBounds(Visualization.ALL_ITEMS);
// GraphicsLib.expand(bounds, 50 + (int)(1/display.getScale()));
// DisplayLib.fitViewToBounds(display,bounds,1);
// vis.runAfter("layout",1000);
Control shutoffHighlight =
new HoverActionControl("color") {
// public void itemEntered(VisualItem item, MouseEvent evt) {
// }
public void itemExited(VisualItem item, MouseEvent evt) {
if (highlightedItem != null) {
highlightedItem.setFixed(false);
Iterator iterEdge = highlightedItem.edges();
while (iterEdge.hasNext()) {
EdgeItem eItem = (EdgeItem) iterEdge.next();
NodeItem nItem = eItem.getAdjacentItem(highlightedItem);
if (eItem.isVisible()) {
eItem.setHighlighted(false);
nItem.setHighlighted(false);
}
}
highlightedItem = null;
}
}
};
display.addControlListener(shutoffHighlight);
Control selectItem =
new FocusControl() {
public void itemClicked(VisualItem item, MouseEvent evt) {
if (item.isInGroup("graph.nodes")) {
if (item.getString("type").equals("peptide")) {
Peptide pep = minPeptides.get(item.getString("name"));
expPanel.showPeptide(pep, true);
}
if (item.getString("type").equals("protein")) {
Protein pro = minProteins.get(item.getString("name"));
expPanel.showProtein(pro, true);
}
String pred = "name='" + item.getString("name") + "'";
Iterator iter =
item.getVisualization().items("graph.nodes", ExpressionParser.predicate(pred));
while (iter.hasNext()) {
NodeItem ni = (NodeItem) iter.next();
highlightedItem = ni;
ni.setFixed(true);
Iterator iterEdge = ni.edges();
while (iterEdge.hasNext()) {
EdgeItem eItem = (EdgeItem) iterEdge.next();
NodeItem nItem = eItem.getAdjacentItem(ni);
if (eItem.isVisible()) {
eItem.setHighlighted(true);
nItem.setHighlighted(true);
}
}
}
}
}
};
display.addControlListener(selectItem);
final JPopupMenu menu = new JPopupMenu();
// Create and add a menu item
// JMenuItem printItem = new JMenuItem("Print This");
// printItem.addActionListener(new java.awt.event.ActionListener() {
// public void actionPerformed(java.awt.event.ActionEvent evt) {
// PrintUtilities.printComponent(display);
// }
// });
// menu.add(printItem);
// Set the component to show the popup menu
display.addMouseListener(
new MouseAdapter() {
public void mousePressed(MouseEvent evt) {
if (evt.isPopupTrigger()) {
menu.show(evt.getComponent(), evt.getX(), evt.getY());
}
}
public void mouseReleased(MouseEvent evt) {
if (evt.isPopupTrigger()) {
menu.show(evt.getComponent(), evt.getX(), evt.getY());
}
}
});
display.pan(X / 2.0, Y / 2.0);
return display;
}
public Congress(Table t) {
super(new BorderLayout());
// --------------------------------------------------------------------
// STEP 1: setup the visualized data
final Visualization vis = new Visualization();
m_vis = vis;
final String group = "by_state";
// filter to show only candidates receiving more than $100,000
Predicate p = (Predicate) ExpressionParser.parse("[" + TOTAL_RECEIPTS + "] >= 100000");
VisualTable vt = vis.addTable(group, t, p);
// add a new column containing a label string showing
// candidate name, party, state, year, and total receipts
vt.addColumn(
"label",
"CONCAT(CAP(Candidate), ' (', "
+ "CAP([Party Designation]), '-', [State Code], "
+ "') ', Year, ': $', FORMAT([Total Receipts],2))");
// add calculation for senators
vt.addColumn("Senate", "District <= 0");
vis.setRendererFactory(
new RendererFactory() {
AbstractShapeRenderer sr = new ShapeRenderer();
Renderer arY = new AxisRenderer(Constants.RIGHT, Constants.TOP);
Renderer arX = new AxisRenderer(Constants.CENTER, Constants.FAR_BOTTOM);
public Renderer getRenderer(VisualItem item) {
return item.isInGroup("ylab") ? arY : item.isInGroup("xlab") ? arX : sr;
}
});
// --------------------------------------------------------------------
// STEP 2: create actions to process the visual data
// set up dynamic queries, search set
RangeQueryBinding receiptsQ = new RangeQueryBinding(vt, RECEIPTS);
ListQueryBinding yearsQ = new ListQueryBinding(vt, "Year");
SearchQueryBinding searchQ = new SearchQueryBinding(vt, "Candidate");
// construct the filtering predicate
AndPredicate filter = new AndPredicate(searchQ.getPredicate());
filter.add(yearsQ.getPredicate());
filter.add(receiptsQ.getPredicate());
// set up the actions
AxisLayout xaxis = new AxisLayout(group, "State Code", Constants.X_AXIS, VisiblePredicate.TRUE);
AxisLayout yaxis = new AxisLayout(group, RECEIPTS, Constants.Y_AXIS, VisiblePredicate.TRUE);
// yaxis.setScale(Constants.LOG_SCALE);
yaxis.setRangeModel(receiptsQ.getModel());
receiptsQ.getNumberModel().setValueRange(0, 65000000, 0, 65000000);
xaxis.setLayoutBounds(m_dataB);
yaxis.setLayoutBounds(m_dataB);
AxisLabelLayout ylabels = new AxisLabelLayout("ylab", yaxis, m_ylabB);
NumberFormat nf = NumberFormat.getCurrencyInstance();
nf.setMaximumFractionDigits(0);
ylabels.setNumberFormat(nf);
AxisLabelLayout xlabels = new AxisLabelLayout("xlab", xaxis, m_xlabB, 15);
vis.putAction("xlabels", xlabels);
// dems = blue, reps = red, other = gray
int[] palette =
new int[] {
ColorLib.rgb(150, 150, 255), ColorLib.rgb(255, 150, 150), ColorLib.rgb(180, 180, 180)
};
DataColorAction color =
new DataColorAction(group, "Party", Constants.ORDINAL, VisualItem.STROKECOLOR, palette);
int[] shapes = new int[] {Constants.SHAPE_RECTANGLE, Constants.SHAPE_DIAMOND};
DataShapeAction shape = new DataShapeAction(group, "Senate", shapes);
Counter cntr = new Counter(group);
ActionList draw = new ActionList();
draw.add(cntr);
draw.add(color);
draw.add(shape);
draw.add(xaxis);
draw.add(yaxis);
draw.add(ylabels);
draw.add(new ColorAction(group, VisualItem.FILLCOLOR, 0));
draw.add(new RepaintAction());
vis.putAction("draw", draw);
ActionList update = new ActionList();
update.add(new VisibilityFilter(group, filter));
update.add(cntr);
update.add(xaxis);
update.add(yaxis);
update.add(ylabels);
update.add(new RepaintAction());
vis.putAction("update", update);
UpdateListener lstnr =
new UpdateListener() {
public void update(Object src) {
vis.run("update");
}
};
filter.addExpressionListener(lstnr);
// --------------------------------------------------------------------
// STEP 4: set up a display and ui components to show the visualization
m_display = new Display(vis);
m_display.setItemSorter(
new ItemSorter() {
public int score(VisualItem item) {
int score = super.score(item);
if (item.isInGroup(group)) score += item.getInt(TOTAL_RECEIPTS);
return score;
}
});
m_display.setBorder(BorderFactory.createEmptyBorder(10, 10, 10, 10));
m_display.setSize(700, 450);
m_display.setHighQuality(true);
m_display.addComponentListener(
new ComponentAdapter() {
public void componentResized(ComponentEvent e) {
displayLayout();
}
});
displayLayout();
m_details = new JFastLabel(m_title);
m_details.setPreferredSize(new Dimension(75, 20));
m_details.setVerticalAlignment(SwingConstants.BOTTOM);
m_total.setPreferredSize(new Dimension(500, 20));
m_total.setHorizontalAlignment(SwingConstants.RIGHT);
m_total.setVerticalAlignment(SwingConstants.BOTTOM);
ToolTipControl ttc = new ToolTipControl("label");
Control hoverc =
new ControlAdapter() {
public void itemEntered(VisualItem item, MouseEvent evt) {
if (item.isInGroup(group)) {
m_total.setText(item.getString("label"));
item.setFillColor(item.getStrokeColor());
item.setStrokeColor(ColorLib.rgb(0, 0, 0));
item.getVisualization().repaint();
}
}
public void itemExited(VisualItem item, MouseEvent evt) {
if (item.isInGroup(group)) {
m_total.setText(m_totalStr);
item.setFillColor(item.getEndFillColor());
item.setStrokeColor(item.getEndStrokeColor());
item.getVisualization().repaint();
}
}
};
m_display.addControlListener(ttc);
m_display.addControlListener(hoverc);
// --------------------------------------------------------------------
// STEP 5: launching the visualization
this.addComponentListener(lstnr);
// details
Box infoBox = new Box(BoxLayout.X_AXIS);
infoBox.add(Box.createHorizontalStrut(5));
infoBox.add(m_details);
infoBox.add(Box.createHorizontalGlue());
infoBox.add(Box.createHorizontalStrut(5));
infoBox.add(m_total);
infoBox.add(Box.createHorizontalStrut(5));
// set up search box
JSearchPanel searcher = searchQ.createSearchPanel();
searcher.setLabelText("Candidate: ");
searcher.setBorder(BorderFactory.createEmptyBorder(5, 5, 5, 0));
// create dynamic queries
Box radioBox = new Box(BoxLayout.X_AXIS);
radioBox.add(Box.createHorizontalStrut(5));
radioBox.add(searcher);
radioBox.add(Box.createHorizontalGlue());
radioBox.add(Box.createHorizontalStrut(5));
radioBox.add(yearsQ.createRadioGroup());
radioBox.add(Box.createHorizontalStrut(16));
JRangeSlider slider = receiptsQ.createVerticalRangeSlider();
slider.setThumbColor(null);
slider.setMinExtent(150000);
slider.addMouseListener(
new MouseAdapter() {
public void mousePressed(MouseEvent e) {
m_display.setHighQuality(false);
}
public void mouseReleased(MouseEvent e) {
m_display.setHighQuality(true);
m_display.repaint();
}
});
vis.run("draw");
vis.run("xlabels");
add(infoBox, BorderLayout.NORTH);
add(m_display, BorderLayout.CENTER);
add(slider, BorderLayout.EAST);
add(radioBox, BorderLayout.SOUTH);
UILib.setColor(this, ColorLib.getColor(255, 255, 255), Color.GRAY);
slider.setForeground(Color.LIGHT_GRAY);
UILib.setFont(radioBox, FontLib.getFont("Tahoma", 15));
m_details.setFont(FontLib.getFont("Tahoma", 18));
m_total.setFont(FontLib.getFont("Tahoma", 16));
}
public void setHighlightPredicate(String attrName, String attrVal) {
highlightPredicate = ExpressionParser.predicate("'" + attrName + "' == '" + attrVal + "'");
highlightAttr = attrName;
highlightVal = attrVal;
m_vis.run("repaint");
}
public class NetMonitor {
public static String ACCELX = "accelX";
public static String ACCELY = "accelY";
public static String ACCELZ = "accelZ";
public static String NODEID = "NodeID";
public static String LABEL = "Label";
public static String PARENT = "ParentID";
public static String COLOR = "MyColor";
public static String LEVEL = "Level";
public static String DATATABLE = "Datatable";
public static String TEMP = "Temperature";
public static String CURRENT = "Current";
public static String EDGETYPE = "EdgeType";
public static String TREEEDGE = "TreeEdge";
public static Predicate treeEdgePred =
(Predicate)
ExpressionParser.parse(
"ISEDGE() AND (" + NetMonitor.EDGETYPE + " = \"" + NetMonitor.TREEEDGE + "\")");
public static String TREEEDGESTATE = "TreeEdgeState";
public static Predicate treeEdgeStatePred =
(Predicate)
ExpressionParser.parse(
"ISEDGE() AND (" + NetMonitor.EDGETYPE + " = \"" + NetMonitor.TREEEDGESTATE + "\")");
public static String TREEEDGEALARM = "TreeEdgeAlarm";
public static Predicate treeEdgeAlarmPred =
(Predicate)
ExpressionParser.parse(
"ISEDGE() AND (" + NetMonitor.EDGETYPE + " = \"" + NetMonitor.TREEEDGEALARM + "\")");
public static String TREEEDGETEMP = "TreeEdgeTemp";
public static Predicate treeEdgeTempPred =
(Predicate)
ExpressionParser.parse(
"ISEDGE() AND (" + NetMonitor.EDGETYPE + " = \"" + NetMonitor.TREEEDGETEMP + "\")");
public static String TREEEDGENEIGHBOR = "TreeEdgeNeighbor";
public static Predicate treeEdgeNeighborPred =
(Predicate)
ExpressionParser.parse(
"ISEDGE() AND ("
+ NetMonitor.EDGETYPE
+ " = \""
+ NetMonitor.TREEEDGENEIGHBOR
+ "\")");
public static String NEIGHBOREDGEBI = "NeighborEdgeBi";
public static Predicate neighborEdgeBiPred =
(Predicate)
ExpressionParser.parse(
"ISEDGE() AND (" + NetMonitor.EDGETYPE + " = \"" + NetMonitor.NEIGHBOREDGEBI + "\")");
public static String NEIGHBOREDGEUNI = "NeighborEdgeUni";
public static Predicate neighborEdgeUniPred =
(Predicate)
ExpressionParser.parse(
"ISEDGE() AND ("
+ NetMonitor.EDGETYPE
+ " = \""
+ NetMonitor.NEIGHBOREDGEUNI
+ "\")");
public static String AGE = "Age";
public static String PARENTNODE = "Parent_Node";
public static String PARENTEDGE = "Parent_Edge";
public static String EDGE_SOURCE = "Edge_Source";
public static String EDGE_DESTINATION = "Edge_Destination";
public static final String GRAPH = "graph";
public static final String NODES = "graph.nodes";
public static final String EDGES = "graph.edges";
public static final String LIVEACTION = "readlineActionList";
public static final String LAYOUTACTION = "layoutActionList";
public static int MAXAGE = 50;
public static int MAXDELETEAGE = 100;
/** @param args */
public static void main(String[] args) {
HistoryManagement history = new HistoryManagement();
Map nodeMap = new HashMap();
DataFileReader fileReader = new DataFileReader(args[0], history);
Window window = new Window(nodeMap, fileReader, history);
fileReader.setGUI(window);
fileReader.openDataFile();
fileReader.setNodeMap(nodeMap);
NodeData root = new NodeData(NodeData.ROOT, window, history);
nodeMap.put(NodeData.ROOT, root);
root.addTableRow(window.nodeTable);
root.addValues(0, 0, 0, 0, 0);
root.setLabel("root");
root.addNode(0);
window.graphDisplay.vis.run("color"); // assign the colors
window.graphDisplay.vis.run(LAYOUTACTION); // start up the animated layout
window.graphDisplay.vis.run("timesteps");
window.graphDisplay.vis.run(LIVEACTION);
}
}
/**
* Demonstration of a node-link tree viewer
*
* @version 1.0
* @author <a href="http://jheer.org">jeffrey heer</a>
*/
public class PhysioMapRadialGraphView extends Display {
/** */
private static final long serialVersionUID = 8464331927479988729L;
SemGenSettings settings;
public static final String DATA_FILE = "/socialnet.xml";
private static final String tree = "tree";
private static final String treeNodes = "tree.nodes";
private static final String treeEdges = "tree.edges";
private static final String linear = "linear";
public SemSimModel semsimmodel;
public static final Predicate isprocessfilter = ExpressionParser.predicate("process==true");
public PhysioMapRadialGraphView(
SemGenSettings sets, Graph g, String label, SemSimModel semsimmodel) {
super(new Visualization());
this.semsimmodel = semsimmodel;
// -- set up visualization --
m_vis.add(tree, g);
m_vis.setInteractive(treeEdges, null, false);
// -- set up renderers --
LabelRenderer m_nodeRenderer = new LabelRenderer(label);
m_nodeRenderer.setRenderType(AbstractShapeRenderer.RENDER_TYPE_DRAW_AND_FILL);
m_nodeRenderer.setHorizontalAlignment(Constants.CENTER);
m_nodeRenderer.setRoundedCorner(8, 8);
EdgeRenderer m_edgeRenderer =
new EdgeRenderer(Constants.EDGE_TYPE_LINE, prefuse.Constants.EDGE_ARROW_REVERSE);
m_edgeRenderer.setArrowType(prefuse.Constants.EDGE_ARROW_REVERSE);
m_edgeRenderer.setArrowHeadSize(8, 8);
// MAYBE HERE?
DefaultRendererFactory rf = new DefaultRendererFactory(m_nodeRenderer);
rf.add(new InGroupPredicate(treeEdges), m_edgeRenderer);
m_vis.setRendererFactory(rf);
// m_vis.
// -- set up processing actions --
// colors
ItemAction nodeColor = new NodeColorAction(treeNodes);
ItemAction borderColor = new BorderColorAction(treeNodes);
m_vis.putAction("borderColor", borderColor);
ItemAction textColor = new TextColorAction(treeNodes);
m_vis.putAction("textColor", textColor);
ItemAction edgeColor =
new ColorAction(treeEdges, VisualItem.STROKECOLOR, ColorLib.rgb(0, 0, 0));
ItemAction arrowColor = new ArrowColorAction(treeEdges);
m_vis.putAction("arrowColor", arrowColor);
FontAction fonts = new FontAction(treeNodes, FontLib.getFont("Verdana", 12));
fonts.add("ingroup('_focus_')", FontLib.getFont("Verdana", 12));
// recolor
// When recolor, do these actions
ActionList recolor = new ActionList();
recolor.add(nodeColor);
recolor.add(borderColor);
recolor.add(textColor);
recolor.add(arrowColor);
m_vis.putAction("recolor", recolor);
// repaint
ActionList repaint = new ActionList();
repaint.add(recolor);
repaint.add(new RepaintAction());
m_vis.putAction("repaint", repaint);
// animate paint change
ActionList animatePaint = new ActionList(400);
animatePaint.add(new ColorAnimator(treeNodes));
animatePaint.add(new RepaintAction());
m_vis.putAction("animatePaint", animatePaint);
// create the tree layout action
RadialTreeLayout treeLayout = new RadialTreeLayout(tree);
treeLayout.setAutoScale(true);
m_vis.putAction("treeLayout", treeLayout);
CollapsedSubtreeLayout subLayout = new CollapsedSubtreeLayout(tree);
m_vis.putAction("subLayout", subLayout);
// create the filtering and layout
ActionList filter = new ActionList();
filter.add(new TreeRootAction(tree));
filter.add(fonts);
filter.add(treeLayout);
filter.add(borderColor);
filter.add(subLayout);
filter.add(textColor);
filter.add(nodeColor);
filter.add(edgeColor);
filter.add(arrowColor);
m_vis.putAction("filter", filter);
// animated transition
ActionList animate = new ActionList(700);
animate.setPacingFunction(new SlowInSlowOutPacer());
animate.add(new QualityControlAnimator());
animate.add(new VisibilityAnimator(tree));
animate.add(new PolarLocationAnimator(treeNodes, linear));
animate.add(new ColorAnimator(treeNodes));
animate.add(new RepaintAction());
m_vis.putAction("animate", animate);
m_vis.alwaysRunAfter("filter", "animate");
// ------------------------------------------------
// initialize the display
setSize(sets.getAppWidth() - ExtractorTab.leftpanewidth - 50, sets.getAppHeight() - 235);
setItemSorter(new TreeDepthItemSorter());
addControlListener(new DragControl());
addControlListener(new ZoomToFitControl());
addControlListener(new ZoomControl());
addControlListener(new PanControl());
addControlListener(new FocusControl(1, "filter"));
addControlListener(new HoverActionControl("repaint"));
// ------------------------------------------------
// filter graph and perform layout
m_vis.run("filter");
// maintain a set of items that should be interpolated linearly
// this isn't absolutely necessary, but makes the animations nicer
// the PolarLocationAnimator should read this set and act accordingly
m_vis.addFocusGroup(linear, new DefaultTupleSet());
m_vis
.getGroup(Visualization.FOCUS_ITEMS)
.addTupleSetListener(
new TupleSetListener() {
public void tupleSetChanged(TupleSet t, Tuple[] add, Tuple[] rem) {
TupleSet linearInterp = m_vis.getGroup(linear);
if (add.length < 1) return;
linearInterp.clear();
for (Node n = (Node) add[0]; n != null; n = n.getParent()) linearInterp.addTuple(n);
}
});
SearchTupleSet search = new PrefixSearchTupleSet();
m_vis.addFocusGroup(Visualization.SEARCH_ITEMS, search);
search.addTupleSetListener(
new TupleSetListener() {
public void tupleSetChanged(TupleSet t, Tuple[] add, Tuple[] rem) {
m_vis.cancel("animatePaint");
m_vis.run("recolor");
m_vis.run("animatePaint");
}
});
}
// ------------------------------------------------------------------------
public JPanel demo() {
return demo(DATA_FILE, "name");
}
public JPanel demo(String datafile, final String label) {
Graph g = new Graph();
g.addNodeRow();
try {
g = new GraphMLReader().readGraph(datafile);
} catch (Exception e) {
e.printStackTrace();
System.exit(1);
}
return demo(g, label);
}
public JPanel demo(Graph g, final String label) {
// create a new radial tree view
final PhysioMapRadialGraphView gview =
new PhysioMapRadialGraphView(settings, g, label, semsimmodel);
Visualization vis = gview.getVisualization();
// create a search panel for the tree map
SearchQueryBinding sq =
new SearchQueryBinding(
(Table) vis.getGroup(treeNodes),
label,
(SearchTupleSet) vis.getGroup(Visualization.SEARCH_ITEMS));
JSearchPanel search = sq.createSearchPanel();
search.setShowResultCount(true);
search.setBorder(BorderFactory.createEmptyBorder(5, 5, 4, 0));
search.setFont(FontLib.getFont("Verdana", Font.PLAIN, 11));
final JTextArea title = new JTextArea();
title.setPreferredSize(new Dimension(450, 500));
title.setMaximumSize(new Dimension(450, 500));
title.setMinimumSize(new Dimension(450, 500));
title.setAlignmentY(CENTER_ALIGNMENT);
title.setLineWrap(true);
title.setWrapStyleWord(true);
title.setBorder(BorderFactory.createEmptyBorder(3, 0, 0, 0));
title.setFont(FontLib.getFont("Verdana", Font.PLAIN, 11));
gview.addControlListener(
new ControlAdapter() {
public void itemEntered(VisualItem item, MouseEvent e) {}
public void itemExited(VisualItem item, MouseEvent e) {
title.setText(null);
}
});
Box searchbox = new Box(BoxLayout.X_AXIS);
searchbox.add(Box.createHorizontalStrut(10));
searchbox.add(search);
searchbox.add(Box.createHorizontalStrut(3));
JPanel panel = new JPanel(new BorderLayout());
panel.add(searchbox, BorderLayout.NORTH);
panel.add(gview, BorderLayout.CENTER);
panel.add(Box.createGlue(), BorderLayout.SOUTH);
Color BACKGROUND = Color.WHITE;
Color FOREGROUND = Color.DARK_GRAY;
UILib.setColor(panel, BACKGROUND, FOREGROUND);
return panel;
}
// ------------------------------------------------------------------------
/** Switch the root of the tree by requesting a new spanning tree at the desired root */
public static class TreeRootAction extends GroupAction {
public TreeRootAction(String graphGroup) {
super(graphGroup);
}
public void run(double frac) {
TupleSet focus = m_vis.getGroup(Visualization.FOCUS_ITEMS);
if (focus == null || focus.getTupleCount() == 0) return;
Graph g = (Graph) m_vis.getGroup(m_group);
Node f = null;
@SuppressWarnings("unchecked")
Iterator<Node> tuples = focus.tuples();
while (tuples.hasNext() && !g.containsTuple(f = tuples.next())) {
f = null;
}
if (f == null) return;
g.getSpanningTree(f);
}
}
/** Set node fill colors */
public static class NodeColorAction extends ColorAction {
public NodeColorAction(String group) {
super(group, VisualItem.FILLCOLOR, ColorLib.rgba(202, 225, 255, 250));
add("_hover", ColorLib.gray(220, 230));
add("ingroup('_search_')", ColorLib.rgb(255, 190, 190));
add("ingroup('_focus_')", ColorLib.rgb(205, 197, 191));
add(isprocessfilter, ColorLib.rgba(255, 193, 193, 255));
}
} // end of inner class NodeColorAction
/** Set node text colors */
public static class TextColorAction extends ColorAction {
public TextColorAction(String group) {
super(group, VisualItem.TEXTCOLOR, ColorLib.gray(0));
add("_hover", ColorLib.rgb(255, 0, 0));
}
} // end of inner class TextColorAction
public static class ArrowColorAction extends ColorAction {
public ArrowColorAction(String group) {
super(group, VisualItem.FILLCOLOR, ColorLib.rgb(0, 0, 0));
}
} // end of inner class ArrowColorAction
public static class BorderColorAction extends ColorAction {
public BorderColorAction(String group) {
super(group, VisualItem.STROKECOLOR, ColorLib.rgba(0, 0, 255, 255));
add(isprocessfilter, ColorLib.rgba(176, 23, 31, 255));
}
}
} // end of class RadialGraphView
public void addInvisibility(String expr) {
addInvisibility(ExpressionParser.predicate(expr));
}