public String listReaderOptions(IChemFormat format) {
if (format.getReaderClassName() == null)
return "No reader avaiable for this format";
IChemObjectReader reader = readerFactory.createReader(format);
if (reader == null)
return "Cannot instantiate writer: " + format.getReaderClassName();
IOSetting[] settings = reader.getIOSettings();
if (settings == null || settings.length == 0)
return "The reader does not have options";
StringBuffer overview = new StringBuffer();
for (String _ : new String[] {
format.getFormatName(), JsConsoleView.NEWLINE })
overview.append(_);
for (IOSetting setting : settings) {
for (String _ : new String[] {
"[", setting.getName(), "]", JsConsoleView.NEWLINE,
setting.getQuestion(), JsConsoleView.NEWLINE,
"Default value: ",
setting.getDefaultSetting(), JsConsoleView.NEWLINE,
"Value : ", setting.getSetting(), JsConsoleView.NEWLINE})
overview.append(_);
}
return overview.toString();
}
public void processIOSettingQuestion(IOSetting setting) {
if (setting.getName().equals(forceReadAs3DCoords.getName())) {
try {
setting.setSetting(forceReadAs3DCoords.getSetting());
} catch (CDKException e) {
logger.debug("Could not propagate forceReadAs3DCoords setting");
}
}
}
@Test
public void testGetIOSetting() {
IOSetting[] settings = chemObjectIO.getIOSettings();
for (IOSetting setting : settings) {
Assert.assertNotNull(setting);
Assert.assertNotNull(setting.getDefaultSetting());
Assert.assertNotNull(setting.getName());
Assert.assertNotNull(setting.getQuestion());
Assert.assertNotNull(setting.getLevel());
}
}