@GET
@Path("/{id}/contains")
/*
@ApiOperation(httpMethod = "GET", value = "Get the genes that contain the given string")
*/
public Response getByContainsQuery(@PathParam("id") String query) {
try {
checkParams();
XRefsDBAdaptor x = dbAdaptorFactory.getXRefDBAdaptor(this.species, this.assembly);
List<List<Xref>> xrefs = x.getByContainsQueryList(Splitter.on(",").splitToList(query));
if (query.startsWith("rs")
|| query.startsWith("AFFY_")
|| query.startsWith("SNP_")
|| query.startsWith("VAR_")
|| query.startsWith("CRTAP_")
|| query.startsWith("FKBP10_")
|| query.startsWith("LEPRE1_")
|| query.startsWith("PPIB_")) {
List<QueryResult> snpXrefs =
x.getByStartsWithSnpQueryList(Splitter.on(",").splitToList(query), queryOptions);
// for (List<Xref> xrefList : snpXrefs) {
// xrefs.get(0).addAll(xrefList);
// }
}
return generateResponse(query, xrefs);
} catch (Exception e) {
e.printStackTrace();
return createErrorResponse("getAllByAccessions", e.toString());
}
}
