/** {@inheritDoc} */ @Override public void loadAdditionalSettingsFrom( final NodeSettingsRO settings, final PortObjectSpec[] specs) throws NotConfigurableException { IntensityBins bins = null; try { bins = new IntensityBins(settings.getNodeSettings(IntensityBinnerNodeModel.KEY_BIN_SETTINGS)); } catch (InvalidSettingsException e) { // TODO throw new NotConfigurableException(e.getMessage(), e); } m_intervalPanel.removeAllIntervalItems(); for (int i = 0; i < bins.getNumBins(); i++) { double binValue = bins.getBinValue(i); boolean leftOpen = bins.isLeftOpen(i); double left = bins.getLeftValue(i); boolean rightOpen = bins.isRightOpen(i); double right = bins.getRightValue(i); IntervalItemPanel item = new IntervalItemPanel( m_intervalPanel, leftOpen, left, rightOpen, right, binValue, DoubleCell.TYPE); m_intervalPanel.addIntervalItem(item); } updateInfo(); getPanel().validate(); getPanel().repaint(); }
/** {@inheritDoc} */ @Override protected void loadInternals(final File internDir, final ExecutionMonitor exec) throws IOException, CanceledExecutionException { File file = new File(internDir, "muscle-internals.xml"); FileInputStream fis = new FileInputStream(file); ModelContentRO modelContent = ModelContent.loadFromXML(fis); try { String[] keys = modelContent.getStringArray("internal-muscle-map-keys"); m_muscle_map.clear(); ModelContentRO subkey = modelContent.getModelContent("internal-muscle-map"); for (String key : keys) { DataCell dc = subkey.getDataCell(key); if (dc instanceof MultiAlignmentCell) { m_muscle_map.put(key, (MultiAlignmentCell) dc); } } fis.close(); } catch (InvalidSettingsException e) { throw new IOException(e.getMessage()); } }