protected RequestType getRequestType(PRPAIN201305UV02 event, AssertionType assertion) {
addDebugLog("Begin -- PatientDiscoveryPolicyTransformHelper.getRequestType()");
RequestType request = new RequestType();
setSubjectToRequestType(event, request, assertion);
ResourceType resource = null;
AttributeHelper attrHelper = new AttributeHelper();
II ii = extractPatientIdentifier(event);
if (ii != null) {
resource = new ResourceType();
resource
.getAttribute()
.add(
attrHelper.attributeFactory(
PatientAssigningAuthorityAttributeId, Constants.DataTypeString, ii.getRoot()));
String sStrippedPatientId = PatientIdFormatUtil.parsePatientId(ii.getExtension());
log.debug("transformSubjectAddedInToCheckPolicy: sStrippedPatientId = " + sStrippedPatientId);
resource
.getAttribute()
.add(
attrHelper.attributeFactory(
PatientIdAttributeId, Constants.DataTypeString, sStrippedPatientId));
request.getResource().add(resource);
}
request.getResource().add(resource);
addDebugLog("End -- PatientDiscoveryPolicyTransformHelper.getRequestType()");
return request;
}
/**
* Transform method to create a CheckPolicyRequest object from a 201306 message
*
* @param request
* @return CheckPolicyRequestType
*/
public CheckPolicyRequestType transformPatientDiscoveryNhincToCheckPolicy(
PatDiscReqEventType event) {
addDebugLog(
"Begin -- PatientDiscoveryPolicyTransformHelper.transformPatientDiscoveryNhincToCheckPolicy()");
CheckPolicyRequestType checkPolicyRequest = null;
if (event == null) {
addErrorLog("Request is null.");
return checkPolicyRequest;
} else {
checkPolicyRequest = new CheckPolicyRequestType();
}
PRPAIN201306UV02 patDiscReq = event.getPRPAIN201306UV02();
RequestType request = new RequestType();
SubjectHelper subjHelp = new SubjectHelper();
SubjectType subject =
subjHelp.subjectFactory(event.getSendingHomeCommunity(), event.getAssertion());
log.debug("transformPatientDiscoveryNhincToCheckPolicy - adding subject");
request.getSubject().add(subject);
II qualifiedPatientIdentifier = extractPatientIdentifier(patDiscReq);
if (qualifiedPatientIdentifier != null) {
ResourceType resource = new ResourceType();
AttributeHelper attrHelper = new AttributeHelper();
resource
.getAttribute()
.add(
attrHelper.attributeFactory(
PatientAssigningAuthorityAttributeId,
Constants.DataTypeString,
qualifiedPatientIdentifier.getRoot()));
String sStrippedPatientId =
PatientIdFormatUtil.parsePatientId(qualifiedPatientIdentifier.getExtension());
log.debug(
"transformPatientDiscoveryNhincToCheckPolicy: sStrippedPatientId = "
+ sStrippedPatientId);
resource
.getAttribute()
.add(
attrHelper.attributeFactory(
PatientIdAttributeId, Constants.DataTypeString, sStrippedPatientId));
request.getResource().add(resource);
}
log.debug("transformPatientDiscoveryNhincToCheckPolicy - adding assertion data");
AssertionHelper assertHelp = new AssertionHelper();
assertHelp.appendAssertionDataToRequest(request, event.getAssertion());
request.setAction(ActionHelper.actionFactory(ActionInValue));
checkPolicyRequest.setRequest(request);
checkPolicyRequest.setAssertion(event.getAssertion());
addDebugLog(
"End -- PatientDiscoveryPolicyTransformHelper.transformPatientDiscoveryNhincToCheckPolicy()");
return checkPolicyRequest;
}
public static void PrintId(II id, String idname) {
if (idname == null) {
idname = "";
}
if (!(id == null)) {
log.info(idname + ".id.root=" + id.getRoot() + ";");
log.info(idname + ".id.extension=" + id.getExtension() + ";");
} else {
log.info("id for " + idname + " is null");
}
}
/** Test of BuildMessageFromMpiPatient method, of class HL7Parser201306. */
@Test
public void testBuildMessageFromMpiPatient() {
System.out.println("BuildMessageFromMpiPatient");
II subjectId = new II();
subjectId.setRoot("2.16.840.1.113883.3.200");
subjectId.setExtension("1234");
String firstExpectedName = "Joe";
String lastExpectedName = "Smith";
String middleExpectedName = "Middle";
String expectedTitle = "Title";
String expectedSuffix = "Suffix";
PRPAIN201305UV02 query =
TestHelper.build201305(
firstExpectedName, lastExpectedName, "M", "March 1, 1956", subjectId);
Identifier patId = new Identifier();
patId.setId("1234");
patId.setOrganizationId("2.16.840.1.113883.3.200");
Patient patient =
TestHelper.createMpiPatient(
firstExpectedName, lastExpectedName, middleExpectedName, "M", "March 1, 1956", patId);
patient.getName().setSuffix(expectedSuffix);
patient.getName().setTitle(expectedTitle);
PRPAIN201306UV02 result = HL7Parser201306.BuildMessageFromMpiPatient(patient, query);
// TODO review the generated test code and remove the default call to fail.
PNExplicit pnResult =
result
.getControlActProcess()
.getSubject()
.get(0)
.getRegistrationEvent()
.getSubject1()
.getPatient()
.getPatientPerson()
.getValue()
.getName()
.get(0);
PatientName patientName = extractName(pnResult);
assertEquals(lastExpectedName, patientName.LastName);
assertEquals(firstExpectedName, patientName.FirstName);
assertEquals(middleExpectedName, patientName.MiddleName);
assertEquals(expectedTitle, patientName.Title);
assertEquals(expectedSuffix, patientName.Suffix);
}
@Test
public void testBuildMessageFromMpiPatient_MultiPhoneNumber() {
System.out.println("testBuildMessageFromMpiPatient_MultiPhoneNumber");
II subjectId = new II();
subjectId.setRoot("2.16.840.1.113883.3.200");
subjectId.setExtension("1234");
String firstExpectedName = "Joe";
String lastExpectedName = "Smith";
String middleExpectedName = "Middle";
String expectedTitle = "Title";
String expectedSuffix = "Suffix";
PRPAIN201305UV02 query =
TestHelper.build201305(
firstExpectedName, lastExpectedName, "M", "March 1, 1956", subjectId);
Identifier patId = new Identifier();
patId.setId("1234");
patId.setOrganizationId("2.16.840.1.113883.3.200");
Patient patient =
TestHelper.createMpiPatient(
firstExpectedName, lastExpectedName, middleExpectedName, "M", "March 1, 1956", patId);
patient.getName().setSuffix(expectedSuffix);
patient.getName().setTitle(expectedTitle);
patient.getPhoneNumbers().add(new PhoneNumber("7031231234"));
patient.getPhoneNumbers().add(new PhoneNumber("2021231234"));
PRPAIN201306UV02 result = HL7Parser201306.BuildMessageFromMpiPatient(patient, query);
// TODO review the generated test code and remove the default call to fail.
PRPAMT201310UV02Person person =
result
.getControlActProcess()
.getSubject()
.get(0)
.getRegistrationEvent()
.getSubject1()
.getPatient()
.getPatientPerson()
.getValue();
assertEquals(2, person.getTelecom().size());
assertEquals("7031231234", person.getTelecom().get(0).getValue());
assertEquals("2021231234", person.getTelecom().get(1).getValue());
}
public static Identifiers ExtractPersonIdentifiers(PRPAMT201306UV02ParameterList params) {
log.debug("Entering HL7Parser201305.ExtractPersonIdentifiers method...");
Identifiers ids = new Identifiers();
Identifier id = new Identifier();
if (params.getLivingSubjectId() != null
&& params.getLivingSubjectId().size() > 0
&& params.getLivingSubjectId().get(0) != null) {
PRPAMT201306UV02LivingSubjectId livingSubjectId = params.getLivingSubjectId().get(0);
if (livingSubjectId.getValue() != null
&& livingSubjectId.getValue().size() > 0
&& livingSubjectId.getValue().get(0) != null) {
II subjectId = livingSubjectId.getValue().get(0);
if (subjectId.getExtension() != null
&& subjectId.getExtension().length() > 0
&& subjectId.getRoot() != null
&& subjectId.getRoot().length() > 0) {
id.setId(subjectId.getExtension());
id.setOrganizationId(subjectId.getRoot());
log.info(
"Created id from patient identifier [organization="
+ id.getOrganizationId()
+ "][id="
+ id.getId()
+ "]");
ids.add(id);
} else {
log.info("message does not contain an id");
}
} else {
log.info("message does not contain an id");
}
} else {
log.info("message does not contain an id");
}
log.debug("Exiting HL7Parser201305.ExtractPersonIdentifiers method...");
return ids;
}
@Test
public void testBuildMessageFromMpiPatient_MultiAddress() {
System.out.println("testBuildMessageFromMpiPatient_MultiAddress");
II subjectId = new II();
subjectId.setRoot("2.16.840.1.113883.3.200");
subjectId.setExtension("1234");
String firstExpectedName = "Joe";
String lastExpectedName = "Smith";
String middleExpectedName = "Middle";
String expectedTitle = "Title";
String expectedSuffix = "Suffix";
PRPAIN201305UV02 query =
TestHelper.build201305(
firstExpectedName, lastExpectedName, "M", "March 1, 1956", subjectId);
Identifier patId = new Identifier();
patId.setId("1234");
patId.setOrganizationId("2.16.840.1.113883.3.200");
Patient patient =
TestHelper.createMpiPatient(
firstExpectedName, lastExpectedName, middleExpectedName, "M", "March 1, 1956", patId);
patient.getName().setSuffix(expectedSuffix);
patient.getName().setTitle(expectedTitle);
Address add = new Address();
add.setCity("Chantilly");
add.setState("VA");
add.setStreet1("5155 Parkstone Drive");
add.setStreet2("Att:Developer");
add.setZip("20151");
Address add2 = new Address();
add2.setCity("Melbourne");
add2.setState("FL");
add2.setStreet1("1025 West NASA Boulevard");
add2.setStreet2("Att:Developer");
add2.setZip("32919-0001");
patient.getAddresses().add(add);
patient.getAddresses().add(add2);
PRPAIN201306UV02 result = HL7Parser201306.BuildMessageFromMpiPatient(patient, query);
// TODO review the generated test code and remove the default call to fail.
PRPAMT201310UV02Person person =
result
.getControlActProcess()
.getSubject()
.get(0)
.getRegistrationEvent()
.getSubject1()
.getPatient()
.getPatientPerson()
.getValue();
assertEquals(2, person.getAddr().size());
assertEquals(5, person.getAddr().get(0).getContent().size());
assertEquals(5, person.getAddr().get(1).getContent().size());
// assertEquals("5155 Parkstone Drive", person.getAddr().get(0).getUse().get(0));
// assertEquals("1025 West NASA Boulevard", person.getAddr().get(1).getUse().get(0));
}
public static II IIFactory(String root, String extension) {
II ii = new II();
ii.setExtension(extension);
ii.setRoot(HomeCommunityMap.formatHomeCommunityId(root));
return ii;
}
public static II IIFactoryCreateNull(String nullFlavor) {
II ii = new II();
ii.getNullFlavor().add(Constants.NullFlavor_NotAvailable);
return ii;
}
private static II extractPatientIdentifier(PRPAIN201305UV02 message) {
II ii = null;
String assigningAuthority = null;
if (message != null
&& message.getControlActProcess() != null
&& NullChecker.isNotNullish(message.getControlActProcess().getAuthorOrPerformer())
&& message.getControlActProcess().getAuthorOrPerformer().get(0) != null
&& message.getControlActProcess().getAuthorOrPerformer().get(0).getAssignedDevice() != null
&& message
.getControlActProcess()
.getAuthorOrPerformer()
.get(0)
.getAssignedDevice()
.getValue()
!= null
&& NullChecker.isNotNullish(
message
.getControlActProcess()
.getAuthorOrPerformer()
.get(0)
.getAssignedDevice()
.getValue()
.getId())
&& message
.getControlActProcess()
.getAuthorOrPerformer()
.get(0)
.getAssignedDevice()
.getValue()
.getId()
.get(0)
!= null
&& NullChecker.isNotNullish(
message
.getControlActProcess()
.getAuthorOrPerformer()
.get(0)
.getAssignedDevice()
.getValue()
.getId()
.get(0)
.getRoot())) {
assigningAuthority =
message
.getControlActProcess()
.getAuthorOrPerformer()
.get(0)
.getAssignedDevice()
.getValue()
.getId()
.get(0)
.getRoot();
}
if ((message != null)
&& (message.getControlActProcess() != null)
&& (message.getControlActProcess().getQueryByParameter() != null)) {
JAXBElement<PRPAMT201306UV02QueryByParameter> queryParam =
message.getControlActProcess().getQueryByParameter();
PRPAMT201306UV02QueryByParameter queryParam201306 = queryParam.getValue();
if (queryParam201306.getParameterList() != null
&& queryParam201306.getParameterList().getLivingSubjectId() != null) {
List<PRPAMT201306UV02LivingSubjectId> livingSubjectIdList =
queryParam201306.getParameterList().getLivingSubjectId();
if (NullChecker.isNotNullish(livingSubjectIdList)) {
for (PRPAMT201306UV02LivingSubjectId livingSubId : livingSubjectIdList) {
for (II id : livingSubId.getValue()) {
if (id != null
&& NullChecker.isNotNullish(id.getExtension())
&& NullChecker.isNotNullish(id.getRoot())
&& id.getRoot().equalsIgnoreCase(assigningAuthority)) {
ii = id;
// Break out of the inner loop
break;
}
}
// If the id was found break out of the outer loop
if (ii != null) {
break;
}
}
}
}
}
return ii;
}
/**
* Transform method to create a CheckPolicyRequest object from a 201305 request
*
* @param request
* @return CheckPolicyRequestType
*/
public CheckPolicyRequestType transformPatientDiscoveryEntityToCheckPolicy(
RespondingGatewayPRPAIN201305UV02RequestType event) {
addDebugLog(
"Begin -- PatientDiscoveryPolicyTransformHelper.transformPatientDiscoveryEntityToCheckPolicy()");
CheckPolicyRequestType checkPolicyRequest = null;
if (event == null) {
addErrorLog("Request is null.");
return checkPolicyRequest;
} else {
checkPolicyRequest = new CheckPolicyRequestType();
}
PRPAIN201305UV02 patDiscReq = event.getPRPAIN201305UV02();
// RequestType request = getRequestType(patDiscReq, event.getAssertion());
RequestType request = new RequestType();
SubjectHelper subjHelp = new SubjectHelper();
// SubjectType subject = subjHelp.subjectFactory(event.getAssertion().getHomeCommunity(),
// event.getAssertion());
SubjectType subject = new SubjectType();
subject.setSubjectCategory(SubjectHelper.SubjectCategory);
log.debug("transformPatientDiscoveryNhincToCheckPolicy - adding subject");
request.getSubject().add(subject);
II qualifiedPatientIdentifier = extractPatientIdentifier(patDiscReq);
if (qualifiedPatientIdentifier != null) {
ResourceType resource = new ResourceType();
AttributeHelper attrHelper = new AttributeHelper();
resource
.getAttribute()
.add(
attrHelper.attributeFactory(
PatientAssigningAuthorityAttributeId,
Constants.DataTypeString,
qualifiedPatientIdentifier.getRoot()));
String sStrippedPatientId =
PatientIdFormatUtil.parsePatientId(qualifiedPatientIdentifier.getExtension());
log.debug(
"transformPatientDiscoveryNhincToCheckPolicy: sStrippedPatientId = "
+ sStrippedPatientId);
resource
.getAttribute()
.add(
attrHelper.attributeFactory(
PatientIdAttributeId, Constants.DataTypeString, sStrippedPatientId));
HomeCommunityType homeCommunityId = null;
if (event != null
&& event.getPRPAIN201305UV02() != null
&& NullChecker.isNotNullish(event.getPRPAIN201305UV02().getReceiver())
&& event.getPRPAIN201305UV02().getReceiver().get(0) != null
&& event.getPRPAIN201305UV02().getReceiver().get(0).getDevice() != null
&& event.getPRPAIN201305UV02().getReceiver().get(0).getDevice().getAsAgent() != null
&& event.getPRPAIN201305UV02().getReceiver().get(0).getDevice().getAsAgent().getValue()
!= null
&& event
.getPRPAIN201305UV02()
.getReceiver()
.get(0)
.getDevice()
.getAsAgent()
.getValue()
.getRepresentedOrganization()
!= null
&& event
.getPRPAIN201305UV02()
.getReceiver()
.get(0)
.getDevice()
.getAsAgent()
.getValue()
.getRepresentedOrganization()
.getValue()
!= null
&& NullChecker.isNotNullish(
event
.getPRPAIN201305UV02()
.getReceiver()
.get(0)
.getDevice()
.getAsAgent()
.getValue()
.getRepresentedOrganization()
.getValue()
.getId())
&& event
.getPRPAIN201305UV02()
.getReceiver()
.get(0)
.getDevice()
.getAsAgent()
.getValue()
.getRepresentedOrganization()
.getValue()
.getId()
.get(0)
!= null
&& NullChecker.isNotNullish(
event
.getPRPAIN201305UV02()
.getReceiver()
.get(0)
.getDevice()
.getAsAgent()
.getValue()
.getRepresentedOrganization()
.getValue()
.getId()
.get(0)
.getRoot())) {
homeCommunityId = new HomeCommunityType();
homeCommunityId.setHomeCommunityId(
event
.getPRPAIN201305UV02()
.getReceiver()
.get(0)
.getDevice()
.getAsAgent()
.getValue()
.getRepresentedOrganization()
.getValue()
.getId()
.get(0)
.getRoot());
}
resource
.getAttribute()
.add(
attrHelper.attributeFactory(
Constants.HomeCommunityAttributeId,
Constants.DataTypeString,
subjHelp.determineSendingHomeCommunityId(homeCommunityId, event.getAssertion())));
request.getResource().add(resource);
}
log.debug("transformPatientDiscoveryNhincToCheckPolicy - adding assertion data");
AssertionHelper assertHelp = new AssertionHelper();
assertHelp.appendAssertionDataToRequest(request, event.getAssertion());
request.setAction(ActionHelper.actionFactory(ActionOutValue));
checkPolicyRequest.setRequest(request);
checkPolicyRequest.setAssertion(event.getAssertion());
addDebugLog(
"End -- PatientDiscoveryPolicyTransformHelper.transformPatientDiscoveryEntityToCheckPolicy()");
return checkPolicyRequest;
}
@Test
public void ensureNoDuplicates() {
II id1 = new II();
id1.setRoot("1.1");
id1.setExtension("patientId");
id1.setAssigningAuthorityName("AA");
II id2 = new II();
id2.setRoot("1.1");
id2.setExtension("patientId");
id2.setAssigningAuthorityName("AA");
II[] idArray = new II[2];
idArray[0] = id1;
idArray[1] = id2;
AggregationService service = new AggregationService();
Set<II> idSet = service.removeDuplicates(java.util.Arrays.asList(idArray));
assertEquals(1, idSet.size());
II[] noDupesArray = (II[]) idSet.toArray(new II[0]);
assertEquals(id1.getAssigningAuthorityName(), noDupesArray[0].getAssigningAuthorityName());
assertEquals(id1.getExtension(), noDupesArray[0].getExtension());
assertEquals(id1.getRoot(), noDupesArray[0].getRoot());
assertEquals(id1.isDisplayable(), noDupesArray[0].isDisplayable());
}