/**
* Adds a new trait to an existing entity represented by a guid.
*
* @param guid globally unique identifier for the entity
* @param traitInstance trait instance that needs to be added to entity
* @throws RepositoryException
*/
@Override
@GraphTransaction
public void addTrait(String guid, ITypedStruct traitInstance) throws RepositoryException {
Preconditions.checkNotNull(traitInstance, "Trait instance cannot be null");
final String traitName = traitInstance.getTypeName();
LOG.debug("Adding a new trait={} for entity={}", traitName, guid);
try {
Vertex instanceVertex = graphHelper.getVertexForGUID(guid);
// add the trait instance as a new vertex
final String typeName = GraphHelper.getTypeName(instanceVertex);
TypedInstanceToGraphMapper instanceToGraphMapper =
new TypedInstanceToGraphMapper(graphToInstanceMapper, deleteHandler);
instanceToGraphMapper.mapTraitInstanceToVertex(
traitInstance, typeSystem.getDataType(ClassType.class, typeName), instanceVertex);
// update the traits in entity once adding trait instance is successful
GraphHelper.addProperty(instanceVertex, Constants.TRAIT_NAMES_PROPERTY_KEY, traitName);
GraphHelper.setProperty(
instanceVertex,
Constants.MODIFICATION_TIMESTAMP_PROPERTY_KEY,
RequestContext.get().getRequestTime());
} catch (RepositoryException e) {
throw e;
} catch (Exception e) {
throw new RepositoryException(e);
}
}
private void verifyRestoredClassType(TypesDef types, String typeName) throws AtlasException {
boolean clsTypeFound = false;
List<HierarchicalTypeDefinition<ClassType>> classTypes = types.classTypesAsJavaList();
for (HierarchicalTypeDefinition<ClassType> classType : classTypes) {
if (classType.typeName.equals(typeName)) {
ClassType expectedType = ts.getDataType(ClassType.class, classType.typeName);
Assert.assertEquals(
expectedType.immediateAttrs.size(), classType.attributeDefinitions.length);
Assert.assertEquals(expectedType.superTypes.size(), classType.superTypes.size());
Assert.assertEquals(classType.typeDescription, classType.typeName + DESCRIPTION);
clsTypeFound = true;
}
}
Assert.assertTrue(clsTypeFound, typeName + " type not restored");
}
@Test(dependsOnMethods = "testStore")
public void testRestore() throws Exception {
TypesDef types = typeStore.restore();
// validate enum
List<EnumTypeDefinition> enumTypes = types.enumTypesAsJavaList();
Assert.assertEquals(1, enumTypes.size());
EnumTypeDefinition orgLevel = enumTypes.get(0);
Assert.assertEquals(orgLevel.name, "OrgLevel");
Assert.assertEquals(orgLevel.description, "OrgLevel" + DESCRIPTION);
Assert.assertEquals(orgLevel.enumValues.length, 2);
EnumValue enumValue = orgLevel.enumValues[0];
Assert.assertEquals(enumValue.value, "L1");
Assert.assertEquals(enumValue.ordinal, 1);
// validate class
List<StructTypeDefinition> structTypes = types.structTypesAsJavaList();
Assert.assertEquals(1, structTypes.size());
verifyRestoredClassType(types, "Manager");
// validate trait
List<HierarchicalTypeDefinition<TraitType>> traitTypes = types.traitTypesAsJavaList();
Assert.assertEquals(1, traitTypes.size());
HierarchicalTypeDefinition<TraitType> trait = traitTypes.get(0);
Assert.assertEquals("SecurityClearance", trait.typeName);
Assert.assertEquals(trait.typeName + DESCRIPTION, trait.typeDescription);
Assert.assertEquals(1, trait.attributeDefinitions.length);
AttributeDefinition attribute = trait.attributeDefinitions[0];
Assert.assertEquals("level", attribute.name);
Assert.assertEquals(DataTypes.INT_TYPE.getName(), attribute.dataTypeName);
// validate the new types
ts.reset();
ts.defineTypes(types);
}
@Override
@GraphTransaction
public ITypedReferenceableInstance getEntityDefinition(
String entityType, String attribute, Object value) throws AtlasException {
LOG.debug("Retrieving entity with type={} and {}={}", entityType, attribute, value);
IDataType type = typeSystem.getDataType(IDataType.class, entityType);
String propertyKey = getFieldNameInVertex(type, attribute);
Vertex instanceVertex =
graphHelper.findVertex(
propertyKey,
value,
Constants.ENTITY_TYPE_PROPERTY_KEY,
entityType,
Constants.STATE_PROPERTY_KEY,
Id.EntityState.ACTIVE.name());
String guid = instanceVertex.getProperty(Constants.GUID_PROPERTY_KEY);
return graphToInstanceMapper.mapGraphToTypedInstance(guid, instanceVertex);
}
/** Utility class for graph operations. */
public final class GraphHelper {
private static final Logger LOG = LoggerFactory.getLogger(GraphHelper.class);
public static final String EDGE_LABEL_PREFIX = "__";
private static final TypeSystem typeSystem = TypeSystem.getInstance();
private static final GraphHelper INSTANCE =
new GraphHelper(TitanGraphProvider.getGraphInstance());
private TitanGraph titanGraph;
private GraphHelper(TitanGraph titanGraph) {
this.titanGraph = titanGraph;
}
public static GraphHelper getInstance() {
return INSTANCE;
}
public Vertex createVertexWithIdentity(
ITypedReferenceableInstance typedInstance, Set<String> superTypeNames) {
final Vertex vertexWithIdentity =
createVertexWithoutIdentity(
typedInstance.getTypeName(), typedInstance.getId(), superTypeNames);
// add identity
final String guid = UUID.randomUUID().toString();
setProperty(vertexWithIdentity, Constants.GUID_PROPERTY_KEY, guid);
// add version information
setProperty(vertexWithIdentity, Constants.VERSION_PROPERTY_KEY, typedInstance.getId().version);
return vertexWithIdentity;
}
public Vertex createVertexWithoutIdentity(
String typeName, Id typedInstanceId, Set<String> superTypeNames) {
LOG.debug(
"Creating vertex for type {} id {}",
typeName,
typedInstanceId != null ? typedInstanceId._getId() : null);
final Vertex vertexWithoutIdentity = titanGraph.addVertex(null);
// add type information
setProperty(vertexWithoutIdentity, Constants.ENTITY_TYPE_PROPERTY_KEY, typeName);
// add super types
for (String superTypeName : superTypeNames) {
addProperty(vertexWithoutIdentity, Constants.SUPER_TYPES_PROPERTY_KEY, superTypeName);
}
// add timestamp information
setProperty(
vertexWithoutIdentity, Constants.TIMESTAMP_PROPERTY_KEY, System.currentTimeMillis());
return vertexWithoutIdentity;
}
public Edge addEdge(Vertex fromVertex, Vertex toVertex, String edgeLabel) {
LOG.debug("Adding edge for {} -> label {} -> {}", fromVertex, edgeLabel, toVertex);
return titanGraph.addEdge(null, fromVertex, toVertex, edgeLabel);
}
public Vertex findVertex(String propertyKey, Object value) {
LOG.debug("Finding vertex for {}={}", propertyKey, value);
GraphQuery query = titanGraph.query().has(propertyKey, value);
Iterator<Vertex> results = query.vertices().iterator();
// returning one since entityType, qualifiedName should be unique
return results.hasNext() ? results.next() : null;
}
public static Iterable<Edge> getOutGoingEdgesByLabel(Vertex instanceVertex, String edgeLabel) {
if (instanceVertex != null && edgeLabel != null) {
return instanceVertex.getEdges(Direction.OUT, edgeLabel);
}
return null;
}
public Edge getOutGoingEdgeById(String edgeId) {
if (edgeId != null) {
return titanGraph.getEdge(edgeId);
}
return null;
}
public static String vertexString(final Vertex vertex) {
StringBuilder properties = new StringBuilder();
for (String propertyKey : vertex.getPropertyKeys()) {
properties
.append(propertyKey)
.append("=")
.append(vertex.getProperty(propertyKey).toString())
.append(", ");
}
return "v[" + vertex.getId() + "], Properties[" + properties + "]";
}
public static String edgeString(final Edge edge) {
return "e["
+ edge.getLabel()
+ "], ["
+ edge.getVertex(Direction.OUT)
+ " -> "
+ edge.getLabel()
+ " -> "
+ edge.getVertex(Direction.IN)
+ "]";
}
public static void setProperty(Vertex vertex, String propertyName, Object value) {
LOG.debug("Setting property {} = \"{}\" to vertex {}", propertyName, value, vertex);
Object existValue = vertex.getProperty(propertyName);
if (value == null || (value instanceof Collection && ((Collection) value).isEmpty())) {
if (existValue != null) {
LOG.info("Removing property - {} value from vertex {}", propertyName, vertex);
vertex.removeProperty(propertyName);
}
} else {
if (!value.equals(existValue)) {
vertex.setProperty(propertyName, value);
}
}
}
public static void addProperty(Vertex vertex, String propertyName, Object value) {
LOG.debug("Setting property {} = \"{}\" to vertex {}", propertyName, value, vertex);
((TitanVertex) vertex).addProperty(propertyName, value);
}
public Edge removeRelation(String edgeId, boolean cascade) {
LOG.debug("Removing edge with id {}", edgeId);
final Edge edge = titanGraph.getEdge(edgeId);
titanGraph.removeEdge(edge);
LOG.info("Removed edge {}", edge);
if (cascade) {
Vertex referredVertex = edge.getVertex(Direction.IN);
titanGraph.removeVertex(referredVertex);
LOG.info("Removed vertex {}", referredVertex);
}
return edge;
}
public Vertex getVertexForGUID(String guid) throws EntityNotFoundException {
return getVertexForProperty(Constants.GUID_PROPERTY_KEY, guid);
}
public Vertex getVertexForProperty(String propertyKey, Object value)
throws EntityNotFoundException {
Vertex instanceVertex = findVertex(propertyKey, value);
if (instanceVertex == null) {
LOG.debug("Could not find a vertex with {}={}", propertyKey, value);
throw new EntityNotFoundException(
"Could not find an entity in the repository with " + propertyKey + "=" + value);
} else {
LOG.debug("Found a vertex {} with {}={}", instanceVertex, propertyKey, value);
}
return instanceVertex;
}
public static String getQualifiedFieldName(
ITypedInstance typedInstance, AttributeInfo attributeInfo) throws AtlasException {
IDataType dataType = typeSystem.getDataType(IDataType.class, typedInstance.getTypeName());
return getQualifiedFieldName(dataType, attributeInfo.name);
}
public static String getQualifiedFieldName(IDataType dataType, String attributeName)
throws AtlasException {
return dataType.getTypeCategory() == DataTypes.TypeCategory.STRUCT
? dataType.getName() + "." + attributeName
// else class or trait
: ((HierarchicalType) dataType).getQualifiedName(attributeName);
}
public static String getTraitLabel(String typeName, String attrName) {
return typeName + "." + attrName;
}
public static List<String> getTraitNames(Vertex entityVertex) {
ArrayList<String> traits = new ArrayList<>();
for (TitanProperty property :
((TitanVertex) entityVertex).getProperties(Constants.TRAIT_NAMES_PROPERTY_KEY)) {
traits.add((String) property.getValue());
}
return traits;
}
public static String getEdgeLabel(ITypedInstance typedInstance, AttributeInfo aInfo)
throws AtlasException {
IDataType dataType = typeSystem.getDataType(IDataType.class, typedInstance.getTypeName());
return getEdgeLabel(dataType, aInfo);
}
public static String getEdgeLabel(IDataType dataType, AttributeInfo aInfo) throws AtlasException {
return GraphHelper.EDGE_LABEL_PREFIX + getQualifiedFieldName(dataType, aInfo.name);
}
public static Id getIdFromVertex(String dataTypeName, Vertex vertex) {
return new Id(
vertex.<String>getProperty(Constants.GUID_PROPERTY_KEY),
vertex.<Integer>getProperty(Constants.VERSION_PROPERTY_KEY),
dataTypeName);
}
public static String getTypeName(Vertex instanceVertex) {
return instanceVertex.getProperty(Constants.ENTITY_TYPE_PROPERTY_KEY);
}
/**
* For the given type, finds an unique attribute and checks if there is an existing instance with
* the same unique value
*
* @param classType
* @param instance
* @return
* @throws AtlasException
*/
public Vertex getVertexForInstanceByUniqueAttribute(
ClassType classType, IReferenceableInstance instance) throws AtlasException {
Vertex result = null;
for (AttributeInfo attributeInfo : classType.fieldMapping().fields.values()) {
if (attributeInfo.isUnique) {
String propertyKey = getQualifiedFieldName(classType, attributeInfo.name);
try {
result = getVertexForProperty(propertyKey, instance.get(attributeInfo.name));
LOG.debug(
"Found vertex by unique attribute : "
+ propertyKey
+ "="
+ instance.get(attributeInfo.name));
} catch (EntityNotFoundException e) {
// Its ok if there is no entity with the same unique value
}
}
}
return result;
}
public static void dumpToLog(final Graph graph) {
LOG.debug("*******************Graph Dump****************************");
LOG.debug("Vertices of {}", graph);
for (Vertex vertex : graph.getVertices()) {
LOG.debug(vertexString(vertex));
}
LOG.debug("Edges of {}", graph);
for (Edge edge : graph.getEdges()) {
LOG.debug(edgeString(edge));
}
LOG.debug("*******************Graph Dump****************************");
}
}
public static String getEdgeLabel(ITypedInstance typedInstance, AttributeInfo aInfo)
throws AtlasException {
IDataType dataType = typeSystem.getDataType(IDataType.class, typedInstance.getTypeName());
return getEdgeLabel(dataType, aInfo);
}
public static String getQualifiedFieldName(
ITypedInstance typedInstance, AttributeInfo attributeInfo) throws AtlasException {
IDataType dataType = typeSystem.getDataType(IDataType.class, typedInstance.getTypeName());
return getQualifiedFieldName(dataType, attributeInfo.name);
}
protected AttributeInfo getAttributeForEdge(String edgLabel) throws AtlasException {
AtlasEdgeLabel atlasEdgeLabel = new AtlasEdgeLabel(edgLabel);
IDataType referenceType = typeSystem.getDataType(IDataType.class, atlasEdgeLabel.getTypeName());
return getFieldMapping(referenceType).fields.get(atlasEdgeLabel.getAttributeName());
}
/**
* Deletes the edge between outvertex and inVertex. The edge is for attribute attributeName of
* outVertex
*
* @param outVertex
* @param inVertex
* @param attributeName
* @throws AtlasException
*/
protected void deleteEdgeBetweenVertices(Vertex outVertex, Vertex inVertex, String attributeName)
throws AtlasException {
LOG.debug(
"Removing edge from {} to {} with attribute name {}",
string(outVertex),
string(inVertex),
attributeName);
String typeName = GraphHelper.getTypeName(outVertex);
String outId = GraphHelper.getIdFromVertex(outVertex);
Id.EntityState state = GraphHelper.getState(outVertex);
if ((outId != null && RequestContext.get().isDeletedEntity(outId))
|| state == Id.EntityState.DELETED) {
// If the reference vertex is marked for deletion, skip updating the reference
return;
}
IDataType type = typeSystem.getDataType(IDataType.class, typeName);
AttributeInfo attributeInfo = getFieldMapping(type).fields.get(attributeName);
String propertyName = GraphHelper.getQualifiedFieldName(type, attributeName);
String edgeLabel = EDGE_LABEL_PREFIX + propertyName;
Edge edge = null;
switch (attributeInfo.dataType().getTypeCategory()) {
case CLASS:
// If its class attribute, its the only edge between two vertices
if (attributeInfo.multiplicity.nullAllowed()) {
edge = GraphHelper.getEdgeForLabel(outVertex, edgeLabel);
if (shouldUpdateReverseAttribute) {
GraphHelper.setProperty(outVertex, propertyName, null);
}
} else {
// Cannot unset a required attribute.
throw new NullRequiredAttributeException(
"Cannot unset required attribute "
+ GraphHelper.getQualifiedFieldName(type, attributeName)
+ " on "
+ string(outVertex)
+ " edge = "
+ edgeLabel);
}
break;
case ARRAY:
// If its array attribute, find the right edge between the two vertices and update array
// property
List<String> elements = outVertex.getProperty(propertyName);
if (elements != null) {
elements =
new ArrayList<>(
elements); // Make a copy, else list.remove reflects on titan.getProperty()
for (String elementEdgeId : elements) {
Edge elementEdge = graphHelper.getEdgeByEdgeId(outVertex, edgeLabel, elementEdgeId);
if (elementEdge == null) {
continue;
}
Vertex elementVertex = elementEdge.getVertex(Direction.IN);
if (elementVertex.getId().toString().equals(inVertex.getId().toString())) {
edge = elementEdge;
// TODO element.size includes deleted items as well. should exclude
if (!attributeInfo.multiplicity.nullAllowed()
&& elements.size() <= attributeInfo.multiplicity.lower) {
// Deleting this edge would violate the attribute's lower bound.
throw new NullRequiredAttributeException(
"Cannot remove array element from required attribute "
+ GraphHelper.getQualifiedFieldName(type, attributeName)
+ " on "
+ string(outVertex)
+ " "
+ string(elementEdge));
}
if (shouldUpdateReverseAttribute) {
// if composite attribute, remove the reference as well. else, just remove the edge
// for example, when table is deleted, process still references the table
// but when column is deleted, table will not reference the deleted column
LOG.debug(
"Removing edge {} from the array attribute {}",
string(elementEdge),
attributeName);
elements.remove(elementEdge.getId().toString());
GraphHelper.setProperty(outVertex, propertyName, elements);
break;
}
}
}
}
break;
case MAP:
// If its map attribute, find the right edge between two vertices and update map property
List<String> keys = outVertex.getProperty(propertyName);
if (keys != null) {
keys =
new ArrayList<>(
keys); // Make a copy, else list.remove reflects on titan.getProperty()
for (String key : keys) {
String keyPropertyName = GraphHelper.getQualifiedNameForMapKey(propertyName, key);
String mapEdgeId = outVertex.getProperty(keyPropertyName);
Edge mapEdge = graphHelper.getEdgeByEdgeId(outVertex, keyPropertyName, mapEdgeId);
Vertex mapVertex = mapEdge.getVertex(Direction.IN);
if (mapVertex.getId().toString().equals(inVertex.getId().toString())) {
// TODO keys.size includes deleted items as well. should exclude
if (attributeInfo.multiplicity.nullAllowed()
|| keys.size() > attributeInfo.multiplicity.lower) {
edge = mapEdge;
} else {
// Deleting this entry would violate the attribute's lower bound.
throw new NullRequiredAttributeException(
"Cannot remove map entry "
+ keyPropertyName
+ " from required attribute "
+ GraphHelper.getQualifiedFieldName(type, attributeName)
+ " on "
+ string(outVertex)
+ " "
+ string(mapEdge));
}
if (shouldUpdateReverseAttribute) {
// remove this key
LOG.debug(
"Removing edge {}, key {} from the map attribute {}",
string(mapEdge),
key,
attributeName);
keys.remove(key);
GraphHelper.setProperty(outVertex, propertyName, keys);
GraphHelper.setProperty(outVertex, keyPropertyName, null);
}
break;
}
}
}
break;
case STRUCT:
case TRAIT:
break;
default:
throw new IllegalStateException(
"There can't be an edge from "
+ string(outVertex)
+ " to "
+ string(inVertex)
+ " with attribute name "
+ attributeName
+ " which is not class/array/map attribute");
}
if (edge != null) {
deleteEdge(edge, false);
RequestContext requestContext = RequestContext.get();
GraphHelper.setProperty(
outVertex,
Constants.MODIFICATION_TIMESTAMP_PROPERTY_KEY,
requestContext.getRequestTime());
requestContext.recordEntityUpdate(outId);
}
}
/**
* Deleting any type vertex. Goes over the complex attributes and removes the references
*
* @param instanceVertex
* @throws AtlasException
*/
protected void deleteTypeVertex(Vertex instanceVertex, boolean force) throws AtlasException {
LOG.debug("Deleting {}", string(instanceVertex));
String typeName = GraphHelper.getTypeName(instanceVertex);
IDataType type = typeSystem.getDataType(IDataType.class, typeName);
FieldMapping fieldMapping = getFieldMapping(type);
for (AttributeInfo attributeInfo : fieldMapping.fields.values()) {
LOG.debug("Deleting attribute {} for {}", attributeInfo.name, string(instanceVertex));
String edgeLabel = GraphHelper.getEdgeLabel(type, attributeInfo);
switch (attributeInfo.dataType().getTypeCategory()) {
case CLASS:
// If its class attribute, delete the reference
deleteEdgeReference(
instanceVertex, edgeLabel, DataTypes.TypeCategory.CLASS, attributeInfo.isComposite);
break;
case STRUCT:
// If its struct attribute, delete the reference
deleteEdgeReference(instanceVertex, edgeLabel, DataTypes.TypeCategory.STRUCT, false);
break;
case ARRAY:
// For array attribute, if the element is struct/class, delete all the references
IDataType elementType = ((DataTypes.ArrayType) attributeInfo.dataType()).getElemType();
DataTypes.TypeCategory elementTypeCategory = elementType.getTypeCategory();
if (elementTypeCategory == DataTypes.TypeCategory.STRUCT
|| elementTypeCategory == DataTypes.TypeCategory.CLASS) {
Iterator<Edge> edges = GraphHelper.getOutGoingEdgesByLabel(instanceVertex, edgeLabel);
if (edges != null) {
while (edges.hasNext()) {
Edge edge = edges.next();
deleteEdgeReference(
edge, elementType.getTypeCategory(), attributeInfo.isComposite, false);
}
}
}
break;
case MAP:
// For map attribute, if the value type is struct/class, delete all the references
DataTypes.MapType mapType = (DataTypes.MapType) attributeInfo.dataType();
DataTypes.TypeCategory valueTypeCategory = mapType.getValueType().getTypeCategory();
String propertyName = GraphHelper.getQualifiedFieldName(type, attributeInfo.name);
if (valueTypeCategory == DataTypes.TypeCategory.STRUCT
|| valueTypeCategory == DataTypes.TypeCategory.CLASS) {
List<String> keys = instanceVertex.getProperty(propertyName);
if (keys != null) {
for (String key : keys) {
String mapEdgeLabel = GraphHelper.getQualifiedNameForMapKey(edgeLabel, key);
deleteEdgeReference(
instanceVertex, mapEdgeLabel, valueTypeCategory, attributeInfo.isComposite);
}
}
}
}
}
deleteVertex(instanceVertex, force);
}
@Test
public void testStore() throws AtlasException {
ImmutableList<String> typeNames = ts.getTypeNames();
typeStore.store(ts, typeNames);
dumpGraph();
}
@AfterClass
public void tearDown() throws Exception {
ts.reset();
AtlasGraphProvider.cleanup();
}
@BeforeClass
public void setUp() throws Exception {
ts = TypeSystem.getInstance();
ts.reset();
TestUtils.defineDeptEmployeeTypes(ts);
}
@Test(dependsOnMethods = "testStore")
public void testTypeUpdate() throws Exception {
// Add enum value
String _description = "_description_updated";
EnumTypeDefinition orgLevelEnum =
new EnumTypeDefinition(
"OrgLevel",
"OrgLevel" + _description,
new EnumValue("L1", 1),
new EnumValue("L2", 2),
new EnumValue("L3", 3));
// Add attribute
StructTypeDefinition addressDetails =
createStructTypeDef(
"Address",
createRequiredAttrDef("street", DataTypes.STRING_TYPE),
createRequiredAttrDef("city", DataTypes.STRING_TYPE),
createOptionalAttrDef("state", DataTypes.STRING_TYPE));
HierarchicalTypeDefinition<ClassType> deptTypeDef =
createClassTypeDef(
"Department",
"Department" + _description,
ImmutableSet.<String>of(),
createRequiredAttrDef("name", DataTypes.STRING_TYPE),
new AttributeDefinition(
"employees",
String.format("array<%s>", "Person"),
Multiplicity.OPTIONAL,
true,
"department"));
TypesDef typesDef =
TypesUtil.getTypesDef(
ImmutableList.of(orgLevelEnum),
ImmutableList.of(addressDetails),
ImmutableList.<HierarchicalTypeDefinition<TraitType>>of(),
ImmutableList.of(deptTypeDef));
Map<String, IDataType> typesAdded = ts.updateTypes(typesDef);
typeStore.store(ts, ImmutableList.copyOf(typesAdded.keySet()));
verifyEdges();
// Validate the updated types
TypesDef types = typeStore.restore();
ts.reset();
ts.defineTypes(types);
// Assert new enum value
EnumType orgLevel = ts.getDataType(EnumType.class, orgLevelEnum.name);
Assert.assertEquals(orgLevel.name, orgLevelEnum.name);
Assert.assertEquals(orgLevel.description, orgLevelEnum.description);
Assert.assertEquals(orgLevel.values().size(), orgLevelEnum.enumValues.length);
Assert.assertEquals(orgLevel.fromValue("L3").ordinal, 3);
// Assert new attribute
StructType addressType = ts.getDataType(StructType.class, addressDetails.typeName);
Assert.assertEquals(addressType.numFields, 3);
Assert.assertEquals(
addressType.fieldMapping.fields.get("state").dataType(), DataTypes.STRING_TYPE);
// Updating the definition again shouldn't add another edge
typesDef =
TypesUtil.getTypesDef(
ImmutableList.<EnumTypeDefinition>of(),
ImmutableList.<StructTypeDefinition>of(),
ImmutableList.<HierarchicalTypeDefinition<TraitType>>of(),
ImmutableList.of(deptTypeDef));
typesAdded = ts.updateTypes(typesDef);
typeStore.store(ts, ImmutableList.copyOf(typesAdded.keySet()));
verifyEdges();
}
/** An implementation backed by a Graph database provided as a Graph Service. */
@Singleton
public class GraphBackedMetadataRepository implements MetadataRepository {
private static final Logger LOG = LoggerFactory.getLogger(GraphBackedMetadataRepository.class);
private static TypeSystem typeSystem = TypeSystem.getInstance();
private static final GraphHelper graphHelper = GraphHelper.getInstance();
private final TitanGraph titanGraph;
private DeleteHandler deleteHandler;
private GraphToTypedInstanceMapper graphToInstanceMapper;
@Inject
public GraphBackedMetadataRepository(
GraphProvider<TitanGraph> graphProvider, DeleteHandler deleteHandler) {
this.titanGraph = graphProvider.get();
graphToInstanceMapper = new GraphToTypedInstanceMapper(titanGraph);
this.deleteHandler = deleteHandler;
}
public GraphToTypedInstanceMapper getGraphToInstanceMapper() {
return graphToInstanceMapper;
}
@Override
public String getTypeAttributeName() {
return Constants.ENTITY_TYPE_PROPERTY_KEY;
}
@Override
public String getStateAttributeName() {
return Constants.STATE_PROPERTY_KEY;
}
/**
* Returns the property key used to store super type names.
*
* @return property key used to store super type names.
*/
@Override
public String getSuperTypeAttributeName() {
return Constants.SUPER_TYPES_PROPERTY_KEY;
}
public String getIdAttributeName() {
return Constants.GUID_PROPERTY_KEY;
}
@Override
public String getTraitLabel(IDataType<?> dataType, String traitName) {
return GraphHelper.getTraitLabel(dataType.getName(), traitName);
}
@Override
public String getFieldNameInVertex(IDataType<?> dataType, AttributeInfo aInfo)
throws AtlasException {
if (aInfo.name.startsWith(Constants.INTERNAL_PROPERTY_KEY_PREFIX)) {
return aInfo.name;
}
return GraphHelper.getQualifiedFieldName(dataType, aInfo.name);
}
public String getFieldNameInVertex(IDataType<?> dataType, String attrName) throws AtlasException {
return GraphHelper.getQualifiedFieldName(dataType, attrName);
}
@Override
public String getEdgeLabel(IDataType<?> dataType, AttributeInfo aInfo) throws AtlasException {
return GraphHelper.getEdgeLabel(dataType, aInfo);
}
@Override
@GraphTransaction
public List<String> createEntities(ITypedReferenceableInstance... entities)
throws RepositoryException, EntityExistsException {
LOG.debug("adding entities={}", entities);
try {
TypedInstanceToGraphMapper instanceToGraphMapper =
new TypedInstanceToGraphMapper(graphToInstanceMapper, deleteHandler);
instanceToGraphMapper.mapTypedInstanceToGraph(
TypedInstanceToGraphMapper.Operation.CREATE, entities);
return RequestContext.get().getCreatedEntityIds();
} catch (EntityExistsException e) {
throw e;
} catch (AtlasException e) {
throw new RepositoryException(e);
}
}
@Override
@GraphTransaction
public ITypedReferenceableInstance getEntityDefinition(String guid)
throws RepositoryException, EntityNotFoundException {
LOG.debug("Retrieving entity with guid={}", guid);
Vertex instanceVertex = graphHelper.getVertexForGUID(guid);
try {
return graphToInstanceMapper.mapGraphToTypedInstance(guid, instanceVertex);
} catch (AtlasException e) {
throw new RepositoryException(e);
}
}
@Override
@GraphTransaction
public ITypedReferenceableInstance getEntityDefinition(
String entityType, String attribute, Object value) throws AtlasException {
LOG.debug("Retrieving entity with type={} and {}={}", entityType, attribute, value);
IDataType type = typeSystem.getDataType(IDataType.class, entityType);
String propertyKey = getFieldNameInVertex(type, attribute);
Vertex instanceVertex =
graphHelper.findVertex(
propertyKey,
value,
Constants.ENTITY_TYPE_PROPERTY_KEY,
entityType,
Constants.STATE_PROPERTY_KEY,
Id.EntityState.ACTIVE.name());
String guid = instanceVertex.getProperty(Constants.GUID_PROPERTY_KEY);
return graphToInstanceMapper.mapGraphToTypedInstance(guid, instanceVertex);
}
@Override
@GraphTransaction
public List<String> getEntityList(String entityType) throws RepositoryException {
LOG.debug("Retrieving entity list for type={}", entityType);
GraphQuery query = titanGraph.query().has(Constants.ENTITY_TYPE_PROPERTY_KEY, entityType);
Iterator<Vertex> results = query.vertices().iterator();
if (!results.hasNext()) {
return Collections.emptyList();
}
ArrayList<String> entityList = new ArrayList<>();
while (results.hasNext()) {
Vertex vertex = results.next();
entityList.add(vertex.<String>getProperty(Constants.GUID_PROPERTY_KEY));
}
return entityList;
}
/**
* Gets the list of trait names for a given entity represented by a guid.
*
* @param guid globally unique identifier for the entity
* @return a list of trait names for the given entity guid
* @throws RepositoryException
*/
@Override
@GraphTransaction
public List<String> getTraitNames(String guid) throws AtlasException {
LOG.debug("Retrieving trait names for entity={}", guid);
Vertex instanceVertex = graphHelper.getVertexForGUID(guid);
return GraphHelper.getTraitNames(instanceVertex);
}
/**
* Adds a new trait to an existing entity represented by a guid.
*
* @param guid globally unique identifier for the entity
* @param traitInstance trait instance that needs to be added to entity
* @throws RepositoryException
*/
@Override
@GraphTransaction
public void addTrait(String guid, ITypedStruct traitInstance) throws RepositoryException {
Preconditions.checkNotNull(traitInstance, "Trait instance cannot be null");
final String traitName = traitInstance.getTypeName();
LOG.debug("Adding a new trait={} for entity={}", traitName, guid);
try {
Vertex instanceVertex = graphHelper.getVertexForGUID(guid);
// add the trait instance as a new vertex
final String typeName = GraphHelper.getTypeName(instanceVertex);
TypedInstanceToGraphMapper instanceToGraphMapper =
new TypedInstanceToGraphMapper(graphToInstanceMapper, deleteHandler);
instanceToGraphMapper.mapTraitInstanceToVertex(
traitInstance, typeSystem.getDataType(ClassType.class, typeName), instanceVertex);
// update the traits in entity once adding trait instance is successful
GraphHelper.addProperty(instanceVertex, Constants.TRAIT_NAMES_PROPERTY_KEY, traitName);
GraphHelper.setProperty(
instanceVertex,
Constants.MODIFICATION_TIMESTAMP_PROPERTY_KEY,
RequestContext.get().getRequestTime());
} catch (RepositoryException e) {
throw e;
} catch (Exception e) {
throw new RepositoryException(e);
}
}
/**
* Deletes a given trait from an existing entity represented by a guid.
*
* @param guid globally unique identifier for the entity
* @param traitNameToBeDeleted name of the trait
* @throws RepositoryException
*/
@Override
@GraphTransaction
public void deleteTrait(String guid, String traitNameToBeDeleted)
throws TraitNotFoundException, EntityNotFoundException, RepositoryException {
LOG.debug("Deleting trait={} from entity={}", traitNameToBeDeleted, guid);
Vertex instanceVertex = graphHelper.getVertexForGUID(guid);
List<String> traitNames = GraphHelper.getTraitNames(instanceVertex);
if (!traitNames.contains(traitNameToBeDeleted)) {
throw new TraitNotFoundException(
"Could not find trait="
+ traitNameToBeDeleted
+ " in the repository for entity: "
+ guid);
}
try {
final String entityTypeName = GraphHelper.getTypeName(instanceVertex);
String relationshipLabel = GraphHelper.getTraitLabel(entityTypeName, traitNameToBeDeleted);
Edge edge = GraphHelper.getEdgeForLabel(instanceVertex, relationshipLabel);
deleteHandler.deleteEdgeReference(edge, DataTypes.TypeCategory.TRAIT, false, true);
// update the traits in entity once trait removal is successful
traitNames.remove(traitNameToBeDeleted);
updateTraits(instanceVertex, traitNames);
} catch (Exception e) {
throw new RepositoryException(e);
}
}
private void updateTraits(Vertex instanceVertex, List<String> traitNames) {
// remove the key
instanceVertex.removeProperty(Constants.TRAIT_NAMES_PROPERTY_KEY);
// add it back again
for (String traitName : traitNames) {
GraphHelper.addProperty(instanceVertex, Constants.TRAIT_NAMES_PROPERTY_KEY, traitName);
}
GraphHelper.setProperty(
instanceVertex,
Constants.MODIFICATION_TIMESTAMP_PROPERTY_KEY,
RequestContext.get().getRequestTime());
}
@Override
@GraphTransaction
public AtlasClient.EntityResult updateEntities(ITypedReferenceableInstance... entitiesUpdated)
throws RepositoryException {
LOG.debug("updating entity {}", entitiesUpdated);
try {
TypedInstanceToGraphMapper instanceToGraphMapper =
new TypedInstanceToGraphMapper(graphToInstanceMapper, deleteHandler);
instanceToGraphMapper.mapTypedInstanceToGraph(
TypedInstanceToGraphMapper.Operation.UPDATE_FULL, entitiesUpdated);
RequestContext requestContext = RequestContext.get();
return new AtlasClient.EntityResult(
requestContext.getCreatedEntityIds(),
requestContext.getUpdatedEntityIds(),
requestContext.getDeletedEntityIds());
} catch (AtlasException e) {
throw new RepositoryException(e);
}
}
@Override
@GraphTransaction
public AtlasClient.EntityResult updatePartial(ITypedReferenceableInstance entity)
throws RepositoryException {
LOG.debug("updating entity {}", entity);
try {
TypedInstanceToGraphMapper instanceToGraphMapper =
new TypedInstanceToGraphMapper(graphToInstanceMapper, deleteHandler);
instanceToGraphMapper.mapTypedInstanceToGraph(
TypedInstanceToGraphMapper.Operation.UPDATE_PARTIAL, entity);
RequestContext requestContext = RequestContext.get();
return new AtlasClient.EntityResult(
requestContext.getCreatedEntityIds(),
requestContext.getUpdatedEntityIds(),
requestContext.getDeletedEntityIds());
} catch (AtlasException e) {
throw new RepositoryException(e);
}
}
@Override
@GraphTransaction
public AtlasClient.EntityResult deleteEntities(List<String> guids) throws RepositoryException {
if (guids == null || guids.size() == 0) {
throw new IllegalArgumentException("guids must be non-null and non-empty");
}
for (String guid : guids) {
if (guid == null) {
LOG.warn("deleteEntities: Ignoring null guid");
continue;
}
try {
Vertex instanceVertex = graphHelper.getVertexForGUID(guid);
deleteHandler.deleteEntity(instanceVertex);
} catch (EntityNotFoundException e) {
// Entity does not exist - treat as non-error, since the caller
// wanted to delete the entity and it's already gone.
LOG.info("Deletion request ignored for non-existent entity with guid " + guid);
continue;
} catch (AtlasException e) {
throw new RepositoryException(e);
}
}
RequestContext requestContext = RequestContext.get();
return new AtlasClient.EntityResult(
requestContext.getCreatedEntityIds(),
requestContext.getUpdatedEntityIds(),
requestContext.getDeletedEntityIds());
}
}