/**
* This method creates a List of DisplaySectionBeans, returning them in the order that the
* sections appear in a CRF. This List is "lazily" initialized the first time it is requested.
*
* @return A List of DisplaySectionBeans.
* @see org.akaza.openclinica.control.managestudy.PrintCRFServlet
* @see org.akaza.openclinica.control.managestudy.PrintDataEntryServlet
*/
public List<DisplaySectionBean> getDisplaySectionBeans() {
FormBeanUtil formBeanUtil;
ViewPersistanceHandler persistanceHandler;
ArrayList<SectionBean> allCrfSections;
// DAO classes for getting item definitions
SectionDAO sectionDao;
CRFVersionDAO crfVersionDao;
if (displaySectionBeans == null) {
displaySectionBeans = new ArrayList<DisplaySectionBean>();
formBeanUtil = new FormBeanUtil();
if (hasStoredData) persistanceHandler = new ViewPersistanceHandler();
// We need a CRF version id to populate the form display
if (this.crfVersionId == 0) {
return displaySectionBeans;
}
sectionDao = new SectionDAO(dataSource);
allCrfSections = (ArrayList) sectionDao.findByVersionId(this.crfVersionId);
// for the purposes of null values, try to obtain a valid
// eventCrfDefinition id
EventDefinitionCRFBean eventDefBean = null;
EventCRFBean eventCRFBean = new EventCRFBean();
if (eventCRFId > 0) {
EventCRFDAO ecdao = new EventCRFDAO(dataSource);
eventCRFBean = (EventCRFBean) ecdao.findByPK(eventCRFId);
StudyEventDAO sedao = new StudyEventDAO(dataSource);
StudyEventBean studyEvent = (StudyEventBean) sedao.findByPK(eventCRFBean.getStudyEventId());
EventDefinitionCRFDAO eventDefinitionCRFDAO = new EventDefinitionCRFDAO(dataSource);
StudyDAO sdao = new StudyDAO(dataSource);
StudyBean study = sdao.findByStudySubjectId(eventCRFBean.getStudySubjectId());
eventDefBean =
eventDefinitionCRFDAO.findByStudyEventIdAndCRFVersionId(
study, studyEvent.getId(), this.crfVersionId);
}
eventDefBean = eventDefBean == null ? new EventDefinitionCRFBean() : eventDefBean;
// Create an array or List of DisplaySectionBeans representing each
// section
// for printing
DisplaySectionBean displaySectionBean;
for (SectionBean sectionBean : allCrfSections) {
displaySectionBean =
formBeanUtil.createDisplaySectionBWithFormGroups(
sectionBean.getId(),
this.crfVersionId,
dataSource,
eventDefBean.getId(),
eventCRFBean,
context);
displaySectionBeans.add(displaySectionBean);
}
}
return displaySectionBeans;
}
@Override
public void processRequest() throws Exception {
CRFVersionDAO cvdao = new CRFVersionDAO(sm.getDataSource());
FormProcessor fp = new FormProcessor(request);
int versionId = fp.getInt("id", true);
String module = fp.getString("module");
request.setAttribute("module", module);
String action = fp.getString("action");
if (versionId == 0) {
addPageMessage(respage.getString("please_choose_a_CRF_version_to_remove"));
forwardPage(Page.CRF_LIST_SERVLET);
} else {
if (StringUtil.isBlank(action)) {
addPageMessage(respage.getString("no_action_specified"));
forwardPage(Page.CRF_LIST_SERVLET);
return;
}
CRFVersionBean version = (CRFVersionBean) cvdao.findByPK(versionId);
SectionDAO secdao = new SectionDAO(sm.getDataSource());
EventCRFDAO evdao = new EventCRFDAO(sm.getDataSource());
// find all event crfs by version id
ArrayList eventCRFs = evdao.findUndeletedWithStudySubjectsByCRFVersion(versionId);
if ("confirm".equalsIgnoreCase(action)) {
request.setAttribute("versionToRemove", version);
request.setAttribute("eventCRFs", eventCRFs);
forwardPage(Page.REMOVE_CRF_VERSION);
} else {
logger.info("submit to remove the crf version");
// version
version.setStatus(Status.DELETED);
version.setUpdater(ub);
version.setUpdatedDate(new Date());
cvdao.update(version);
// added below tbh 092007, seems that we don't remove the event
// crfs in the second pass
for (int ii = 0; ii < eventCRFs.size(); ii++) {
EventCRFBean ecbean = (EventCRFBean) eventCRFs.get(ii);
ecbean.setStatus(Status.AUTO_DELETED);
ecbean.setUpdater(ub);
ecbean.setUpdatedDate(new Date());
evdao.update(ecbean);
}
// added above tbh 092007, to fix task
// all sections
ArrayList sections = secdao.findAllByCRFVersionId(version.getId());
for (int j = 0; j < sections.size(); j++) {
SectionBean section = (SectionBean) sections.get(j);
if (!section.getStatus().equals(Status.DELETED)) {
section.setStatus(Status.AUTO_DELETED);
section.setUpdater(ub);
section.setUpdatedDate(new Date());
secdao.update(section);
}
}
// all item data related to event crfs
ItemDataDAO idao = new ItemDataDAO(sm.getDataSource());
for (int i = 0; i < eventCRFs.size(); i++) {
EventCRFBean eventCRF = (EventCRFBean) eventCRFs.get(i);
if (!eventCRF.getStatus().equals(Status.DELETED)) {
eventCRF.setStatus(Status.AUTO_DELETED);
eventCRF.setUpdater(ub);
eventCRF.setUpdatedDate(new Date());
evdao.update(eventCRF);
ArrayList items = idao.findAllByEventCRFId(eventCRF.getId());
for (int j = 0; j < items.size(); j++) {
ItemDataBean item = (ItemDataBean) items.get(j);
if (!item.getStatus().equals(Status.DELETED)) {
item.setStatus(Status.AUTO_DELETED);
item.setUpdater(ub);
item.setUpdatedDate(new Date());
idao.update(item);
}
}
}
}
addPageMessage(
respage.getString("the_CRF")
+ version.getName()
+ " "
+ respage.getString("has_been_removed_succesfully"));
forwardPage(Page.CRF_LIST_SERVLET);
}
}
}
/*
* (non-Javadoc)
*
* @see org.akaza.openclinica.control.core.SecureController#mayProceed()
*/
@Override
protected void mayProceed() throws InsufficientPermissionException {
checkStudyLocked(Page.LIST_STUDY_SUBJECTS, respage.getString("current_study_locked"));
checkStudyFrozen(Page.LIST_STUDY_SUBJECTS, respage.getString("current_study_frozen"));
locale = request.getLocale();
// < respage =
// ResourceBundle.getBundle("org.akaza.openclinica.i18n.page_messages",
// locale);
// < restext =
// ResourceBundle.getBundle("org.akaza.openclinica.i18n.notes",locale);
// <
// resexception=ResourceBundle.getBundle(
// "org.akaza.openclinica.i18n.exceptions",locale);
// < resword =
// ResourceBundle.getBundle("org.akaza.openclinica.i18n.words",locale);
getInputBeans();
// BWP 12/2/07>> The following COUNT_VALIDATE session attribute is not
// accessible,
// for unknown reasons (threading problems?), when
// double-data entry displays error messages; it's value is always 0; so
// I have to create my
// own session variable here to keep track of DDE stages
// We'll go by the SectionBean's ordinal first
int tabNumber = 1;
if (sb != null) {
tabNumber = sb.getOrdinal();
}
// if tabNumber still isn't valid, check the "tab" parameter
if (tabNumber < 1) {
if (fp == null) {
fp = new FormProcessor(request);
}
String tab = fp.getString("tab");
if (tab == null || tab.length() < 1) {
tabNumber = 1;
} else {
tabNumber = fp.getInt("tab");
}
}
SectionDAO sectionDao = new SectionDAO(sm.getDataSource());
int crfVersionId = ecb.getCRFVersionId();
int eventCRFId = ecb.getId();
ArrayList sections = sectionDao.findAllByCRFVersionId(crfVersionId);
int sectionSize = sections.size();
HttpSession mySession = request.getSession();
DoubleDataProgress doubleDataProgress =
(DoubleDataProgress) mySession.getAttribute(DDE_PROGESS);
if (doubleDataProgress == null || doubleDataProgress.getEventCRFId() != eventCRFId) {
doubleDataProgress = new DoubleDataProgress(sectionSize, eventCRFId);
mySession.setAttribute(DDE_PROGESS, doubleDataProgress);
}
boolean hasVisitedSection = doubleDataProgress.getSectionVisited(tabNumber, eventCRFId);
// setting up one-time validation here
// admit that it's an odd place to put it, but where else?
// placing it in dataentryservlet is creating too many counts
int keyId = ecb.getId();
Integer count = (Integer) session.getAttribute(COUNT_VALIDATE + keyId);
if (count != null) {
count++;
session.setAttribute(COUNT_VALIDATE + keyId, count);
logger.info("^^^just set count to session: " + count);
} else {
count = 0;
session.setAttribute(COUNT_VALIDATE + keyId, count);
logger.info("***count not found, set to session: " + count);
}
DataEntryStage stage = ecb.getStage();
if (stage.equals(DataEntryStage.INITIAL_DATA_ENTRY_COMPLETE) && !hasVisitedSection) {
// if the user has not entered this section yet in Double Data
// Entry, then
// set a flag that default values should be shown in the form
request.setAttribute(DDE_ENTERED, true);
}
// Now update the session attribute
doubleDataProgress.setSectionVisited(eventCRFId, tabNumber, true);
mySession.setAttribute("doubleDataProgress", doubleDataProgress);
// StudyEventStatus status =
Role r = currentRole.getRole();
this.session.setAttribute("mayProcessUploading", "true");
// if (!SubmitDataServlet.maySubmitData(ub, currentRole)) {
// this.session.setAttribute("mayProcessUploading", "false");
// String exceptionName = resexception.getString("no_permission_validation");
// String noAccessMessage =
// resexception.getString("not_perfom_validation_syscontact");
//
// addPageMessage(noAccessMessage);
// throw new InsufficientPermissionException(Page.MENU, exceptionName, "1");
// }
//
// if (stage.equals(DataEntryStage.INITIAL_DATA_ENTRY_COMPLETE)) {
// if (userIsOwnerAndLessThanTwelveHoursHavePassed() && !r.equals(Role.STUDYDIRECTOR)
// && !r.equals(Role.COORDINATOR)) {
// this.session.setAttribute("mayProcessUploading", "false");
// addPageMessage(respage.getString("since_perform_data_entry"));
// throw new InsufficientPermissionException(Page.LIST_STUDY_SUBJECTS_SERVLET,
// resexception.getString("owner_attempting_double_data_entry"), "1");
// }
// } else if (stage.equals(DataEntryStage.DOUBLE_DATA_ENTRY)) {
// if (ub.getId() != ecb.getValidatorId() && !r.equals(Role.STUDYDIRECTOR) &&
// !r.equals(Role.COORDINATOR)) {
// this.session.setAttribute("mayProcessUploading", "false");
// addPageMessage(respage.getString("validation_has_already_begun"));
// throw new InsufficientPermissionException(Page.LIST_STUDY_SUBJECTS_SERVLET,
// resexception
// .getString("non_validator_attempting_double_data_entry"), "1");
// }
// } else {
// this.session.setAttribute("mayProcessUploading", "false");
// addPageMessage(respage.getString("not_perform_validation"));
// throw new InsufficientPermissionException(Page.LIST_STUDY_SUBJECTS_SERVLET,
// resexception.getString("using_double_data_entry_CRF_completed"), "1");
// }
return;
}