public double dComputeResid() throws Exception {
// Evaluates residual matrix for parms[].
// Returns sum-of-squares.
/** TODO deal with CKSolnList flag, employed in .getModelValues() */
function =
new Function(
ConfigurationInput.experiments.experimentalValues,
optimization.testNewParameters(optimization.buildFullParamVector(parms), true));
function =
new Function(
ConfigurationInput.experiments.experimentalValues,
optimization.testNewParameters(optimization.buildFullParamVector(parms), true));
resid = function.getResid();
return function.getSRES();
}
public NBMTHost(Optimization o) throws Exception {
this.optimization = o;
this.parms = optimization.retrieveFittedParameters();
NPARMS = parms.length;
NPTS = ConfigurationInput.experiments.total_no_experiments;
NRESP = ConfigurationInput.experiments.experimentalValues.length;
// resid = new double[NPTS][NRESP];
resid = new double[NPTS * NRESP];
jac = new double[NPTS * NRESP][NPARMS];
for (int i = 0; i < NPARMS; i++) logger.info("Start parm[" + i + "] = " + parms[i]);
myLM = new LM_NBMT(this, NPARMS, NPTS, NRESP); // run the minimizer
for (int i = 0; i < NPARMS; i++) logger.info("End parm[" + i + "] = " + parms[i]);
}