示例#1
0
  private static SAXParserFactory createFastSAXParserFactory()
      throws ParserConfigurationException, SAXException {
    if (fastParserFactoryClass == null) {
      try {
        fastParserFactoryClass =
            Class.forName("org.apache.crimson.jaxp.SAXParserFactoryImpl"); // NOI18N
      } catch (Exception ex) {
        useFastSAXParserFactory = false;
        if (System.getProperty("java.version").startsWith("1.4")) { // NOI18N
          ErrorManager.getDefault().notify(ErrorManager.INFORMATIONAL, ex);
        }
      }
    }
    if (fastParserFactoryClass != null) {
      try {
        SAXParserFactory factory = (SAXParserFactory) fastParserFactoryClass.newInstance();

        return factory;
      } catch (Exception ex) {
        useFastSAXParserFactory = false;
        throw new ParserConfigurationException(ex.getMessage());
      }
    }

    return SAXParserFactory.newInstance();
  }
示例#2
0
  /**
   * Examines a property's type to see which method should be used to parse the property's value.
   *
   * @param desc The description of the property
   * @param value The value of the XML attribute containing the prop value
   * @return The value stored in the element
   * @throws IOException If there is an error reading the document
   */
  public Object getObjectValue(PropertyDescriptor desc, String value) throws IOException {
    // Find out what kind of property it is
    Class type = desc.getPropertyType();

    // If it's an array, get the base type
    if (type.isArray()) {
      type = type.getComponentType();
    }

    // For native types, object wrappers for natives, and strings, use the
    // basic parse routine
    if (type.equals(Integer.TYPE)
        || type.equals(Long.TYPE)
        || type.equals(Short.TYPE)
        || type.equals(Byte.TYPE)
        || type.equals(Boolean.TYPE)
        || type.equals(Float.TYPE)
        || type.equals(Double.TYPE)
        || Integer.class.isAssignableFrom(type)
        || Long.class.isAssignableFrom(type)
        || Short.class.isAssignableFrom(type)
        || Byte.class.isAssignableFrom(type)
        || Boolean.class.isAssignableFrom(type)
        || Float.class.isAssignableFrom(type)
        || Double.class.isAssignableFrom(type)) {
      return parseBasicType(type, value);
    } else if (String.class.isAssignableFrom(type)) {
      return value;
    } else if (java.util.Date.class.isAssignableFrom(type)) {
      // If it's a date, use the date parser
      return parseDate(value, JOXDateHandler.determineDateFormat());
    } else {
      return null;
    }
  }
 Document parseDocument(String filename) throws Exception {
   FileReader reader = new FileReader(filename);
   String firstLine = new BufferedReader(reader).readLine();
   reader.close();
   Document document = null;
   if (firstLine.startsWith("<?xml")) {
     System.err.println("XML detected; using default XML parser.");
   } else {
     try {
       Class nekoParserClass = Class.forName("org.cyberneko.html.parsers.DOMParser");
       Object parser = nekoParserClass.newInstance();
       Method parse = nekoParserClass.getMethod("parse", new Class[] {String.class});
       Method getDocument = nekoParserClass.getMethod("getDocument", new Class[0]);
       parse.invoke(parser, filename);
       document = (Document) getDocument.invoke(parser);
     } catch (Exception e) {
       System.err.println("NekoHTML HTML parser not found; HTML4 support disabled.");
     }
   }
   if (document == null) {
     DocumentBuilderFactory factory = DocumentBuilderFactory.newInstance();
     try { // http://www.w3.org/blog/systeam/2008/02/08/w3c_s_excessive_dtd_traffic
       factory.setFeature("http://apache.org/xml/features/nonvalidating/load-external-dtd", false);
     } catch (ParserConfigurationException e) {
       System.err.println("Warning: Could not disable external DTD loading");
     }
     DocumentBuilder builder = factory.newDocumentBuilder();
     document = builder.parse(filename);
   }
   return document;
 }
 @SuppressWarnings("unchecked")
 public void addDefaultValue(String className, JSONObject oper) throws Exception {
   ObjectMapper defaultValueMapper = ObjectMapperFactory.getOperatorValueSerializer();
   Class<? extends Operator> clazz = (Class<? extends Operator>) classLoader.loadClass(className);
   if (clazz != null) {
     Operator operIns = clazz.newInstance();
     String s = defaultValueMapper.writeValueAsString(operIns);
     oper.put("defaultValue", new JSONObject(s).get(className));
   }
 }
示例#5
0
 private static InputSource getConfigSource(Class pAppClass) throws DataNotFoundException {
   URL resource = pAppClass.getResource(CONFIG_FILE_NAME);
   String resourceFileName = resource.toExternalForm();
   File resourceFile = new File(resourceFileName);
   InputStream configResourceStream = pAppClass.getResourceAsStream(CONFIG_FILE_NAME);
   if (null == configResourceStream) {
     throw new DataNotFoundException(
         "unable to find XML configuration file resource: "
             + CONFIG_FILE_NAME
             + " for class: "
             + pAppClass.getName());
   }
   InputSource inputSource = new InputSource(configResourceStream);
   if (!resourceFile.exists()) {
     inputSource.setSystemId(resourceFileName);
   }
   return (inputSource);
 }
示例#6
0
  static <T> T set(Class<T> interf, Object value) {
    Properties p = new Properties();
    Method ms[] = interf.getMethods();

    for (Method m : ms) {
      p.put(m.getName(), value);
    }
    return Configurable.createConfigurable(interf, (Map<Object, Object>) p);
  }
 public JSONObject describeClass(Class<?> clazz) throws Exception {
   JSONObject desc = new JSONObject();
   desc.put("name", clazz.getName());
   if (clazz.isEnum()) {
     @SuppressWarnings("unchecked")
     Class<Enum<?>> enumClass = (Class<Enum<?>>) clazz;
     ArrayList<String> enumNames = Lists.newArrayList();
     for (Enum<?> e : enumClass.getEnumConstants()) {
       enumNames.add(e.name());
     }
     desc.put("enum", enumNames);
   }
   UI_TYPE ui_type = UI_TYPE.getEnumFor(clazz);
   if (ui_type != null) {
     desc.put("uiType", ui_type.getName());
   }
   desc.put("properties", getClassProperties(clazz, 0));
   return desc;
 }
示例#8
0
  static {
    try {
      // Create factory
      documentBuilderFactory =
          (DocumentBuilderFactory)
              Class.forName("orbeon.apache.xerces.jaxp.DocumentBuilderFactoryImpl").newInstance();

      // Configure factory
      documentBuilderFactory.setNamespaceAware(true);
    } catch (Exception e) {
      throw new OXFException(e);
    }
  }
示例#9
0
  /**
   * Reads an string into a basic type
   *
   * @param type The type of the string to read
   * @param str The string containing the value
   * @return The parsed value of the string
   */
  public static Object parseBasicType(Class type, String str) {
    // Parse the text based on the property type

    if (type.equals(Integer.TYPE) || Integer.class.isAssignableFrom(type)) {
      return new Integer(str);
    } else if (type.equals(Long.TYPE) || Long.class.isAssignableFrom(type)) {
      return new Long(str);
    } else if (type.equals(Short.TYPE) || Short.class.isAssignableFrom(type)) {
      return new Short(str);
    } else if (type.equals(Byte.TYPE) || Byte.class.isAssignableFrom(type)) {
      return new Byte(str);
    } else if (type.equals(Boolean.TYPE) || Boolean.class.isAssignableFrom(type)) {
      return new Boolean(str);
    } else if (type.equals(Float.TYPE) || Float.class.isAssignableFrom(type)) {
      return new Float(str);
    } else if (type.equals(Double.TYPE) || Double.class.isAssignableFrom(type)) {
      return new Double(str);
    }

    return null;
  }
示例#10
0
  /**
   * XML Circuit constructor
   *
   * @param file the file that contains the XML description of the circuit
   * @param g the graphics that will paint the node
   * @throws CircuitLoadingException if the internal circuit can not be loaded
   */
  public CircuitUI(File file, Graphics g) throws CircuitLoadingException {
    this("");

    DocumentBuilderFactory factory = DocumentBuilderFactory.newInstance();
    DocumentBuilder builder;
    Document doc;
    Element root;

    Hashtable<Integer, Link> linkstable = new Hashtable<Integer, Link>();

    try {
      builder = factory.newDocumentBuilder();
      doc = builder.parse(file);
    } catch (SAXException sxe) {
      throw new CircuitLoadingException("SAX exception raised, invalid XML file.");
    } catch (ParserConfigurationException pce) {
      throw new CircuitLoadingException(
          "Parser exception raised, parser configuration is invalid.");
    } catch (IOException ioe) {
      throw new CircuitLoadingException("I/O exception, file cannot be loaded.");
    }

    root = (Element) doc.getElementsByTagName("Circuit").item(0);
    this.setName(root.getAttribute("name"));

    NodeList nl = root.getElementsByTagName("Node");
    Element e;
    Node n;
    Class cl;

    for (int i = 0; i < nl.getLength(); ++i) {
      e = (Element) nl.item(i);

      try {
        cl = Class.forName(e.getAttribute("class"));
      } catch (Exception exc) {
        System.err.println(exc.getMessage());
        throw new RuntimeException("Circuit creation from xml.");
      }

      try {
        n = ((Node) cl.newInstance());
      } catch (Exception exc) {
        System.err.println(exc.getMessage());
        throw new RuntimeException("Circuit creation from xml.");
      }

      this.nodes.add(n);
      n.setLocation(new Integer(e.getAttribute("x")), new Integer(e.getAttribute("y")));

      if (n instanceof giraffe.ui.Nameable) ((Nameable) n).setNodeName(e.getAttribute("node_name"));

      if (n instanceof giraffe.ui.CompositeNode) {
        try {
          ((CompositeNode) n)
              .load(new File(file.getParent() + "/" + e.getAttribute("file_name")), g);
        } catch (Exception exc) {
          /* try to load from the lib */
          ((CompositeNode) n)
              .load(new File(giraffe.Giraffe.PATH + "/lib/" + e.getAttribute("file_name")), g);
        }
      }

      NodeList nlist = e.getElementsByTagName("Anchor");
      Element el;

      for (int j = 0; j < nlist.getLength(); ++j) {
        el = (Element) nlist.item(j);

        Anchor a = n.getAnchor(new Integer(el.getAttribute("id")));
        NodeList linklist = el.getElementsByTagName("Link");
        Element link;
        Link l;

        for (int k = 0; k < linklist.getLength(); ++k) {
          link = (Element) linklist.item(k);
          int id = new Integer(link.getAttribute("id"));
          int index = new Integer(link.getAttribute("index"));

          if (id >= this.linkID) linkID = id + 1;

          if (linkstable.containsKey(id)) {
            l = linkstable.get(id);
            l.addLinkedAnchorAt(a, index);
            a.addLink(l);
          } else {
            l = new Link(id);
            l.addLinkedAnchorAt(a, index);
            this.links.add(l);
            linkstable.put(id, l);
            a.addLink(l);
          }
        }
      }
    }
  }
  private JSONArray getClassProperties(Class<?> clazz, int level) throws IntrospectionException {
    JSONArray arr = new JSONArray();
    TypeDiscoverer td = new TypeDiscoverer();
    try {
      for (PropertyDescriptor pd : Introspector.getBeanInfo(clazz).getPropertyDescriptors()) {
        Method readMethod = pd.getReadMethod();
        if (readMethod != null) {
          if (readMethod.getDeclaringClass() == java.lang.Enum.class) {
            // skip getDeclaringClass
            continue;
          } else if ("class".equals(pd.getName())) {
            // skip getClass
            continue;
          }
        } else {
          // yields com.datatorrent.api.Context on JDK6 and
          // com.datatorrent.api.Context.OperatorContext with JDK7
          if ("up".equals(pd.getName())
              && com.datatorrent.api.Context.class.isAssignableFrom(pd.getPropertyType())) {
            continue;
          }
        }
        // LOG.info("name: " + pd.getName() + " type: " + pd.getPropertyType());

        Class<?> propertyType = pd.getPropertyType();
        if (propertyType != null) {
          JSONObject propertyObj = new JSONObject();
          propertyObj.put("name", pd.getName());
          propertyObj.put("canGet", readMethod != null);
          propertyObj.put("canSet", pd.getWriteMethod() != null);
          if (readMethod != null) {
            for (Class<?> c = clazz; c != null; c = c.getSuperclass()) {
              OperatorClassInfo oci = classInfo.get(c.getName());
              if (oci != null) {
                MethodInfo getMethodInfo = oci.getMethods.get(readMethod.getName());
                if (getMethodInfo != null) {
                  addTagsToProperties(getMethodInfo, propertyObj);
                  break;
                }
              }
            }
            // type can be a type symbol or parameterized type
            td.setTypeArguments(clazz, readMethod.getGenericReturnType(), propertyObj);
          } else {
            if (pd.getWriteMethod() != null) {
              td.setTypeArguments(
                  clazz, pd.getWriteMethod().getGenericParameterTypes()[0], propertyObj);
            }
          }
          // if (!propertyType.isPrimitive() && !propertyType.isEnum() && !propertyType.isArray() &&
          // !propertyType.getName().startsWith("java.lang") && level < MAX_PROPERTY_LEVELS) {
          //  propertyObj.put("properties", getClassProperties(propertyType, level + 1));
          // }
          arr.put(propertyObj);
        }
      }
    } catch (JSONException ex) {
      throw new RuntimeException(ex);
    }
    return arr;
  }
示例#12
0
  /**
   * Examines a property's type to see which method should be used to parse the property's value.
   *
   * @param desc The description of the property
   * @param element The XML element containing the property value
   * @return The value stored in the element
   * @throws IOException If there is an error reading the document
   */
  public Object getObjectValue(PropertyDescriptor desc, Element element) throws IOException {
    // Find out what kind of property it is
    Class type = desc.getPropertyType();

    // If it's an array, get the base type
    if (type.isArray()) {
      type = type.getComponentType();
    }

    // For native types, object wrappers for natives, and strings, use the
    // basic parse routine
    if (type.equals(Integer.TYPE)
        || type.equals(Long.TYPE)
        || type.equals(Short.TYPE)
        || type.equals(Byte.TYPE)
        || type.equals(Boolean.TYPE)
        || type.equals(Float.TYPE)
        || type.equals(Double.TYPE)
        || Integer.class.isAssignableFrom(type)
        || Long.class.isAssignableFrom(type)
        || Short.class.isAssignableFrom(type)
        || Byte.class.isAssignableFrom(type)
        || Boolean.class.isAssignableFrom(type)
        || Float.class.isAssignableFrom(type)
        || Double.class.isAssignableFrom(type)
        || String.class.isAssignableFrom(type)) {
      return readBasicType(type, element);
    } else if (java.util.Date.class.isAssignableFrom(type)) {
      // If it's a date, use the date parser
      return readDate(element);
    } else {
      try {
        // If it's an object, create a new instance of the object (it should
        // be a bean, or there will be trouble)
        Object newOb = type.newInstance();

        // Copy the XML element into the bean
        readObject(newOb, element);

        return newOb;
      } catch (InstantiationException exc) {
        throw new IOException(
            "Error creating object for " + desc.getName() + ": " + exc.toString());
      } catch (IllegalAccessException exc) {
        throw new IOException(
            "Error creating object for " + desc.getName() + ": " + exc.toString());
      }
    }
  }
 /**
  * Unmarshall a Chromosome instance from a given XML Element representation.
  *
  * @param a_activeConfiguration current Configuration object
  * @param a_xmlElement the XML Element representation of the Chromosome
  * @return a new Chromosome instance setup with the data from the XML Element representation
  * @throws ImproperXMLException if the given Element is improperly structured or missing data
  * @throws UnsupportedRepresentationException if the actively configured Gene implementation does
  *     not support the string representation of the alleles used in the given XML document
  * @throws GeneCreationException if there is a problem creating or populating a Gene instance
  * @author Neil Rotstan
  * @since 1.0
  */
 public static Gene[] getGenesFromElement(
     Configuration a_activeConfiguration, Element a_xmlElement)
     throws ImproperXMLException, UnsupportedRepresentationException, GeneCreationException {
   // Do some sanity checking. Make sure the XML Element isn't null and
   // that it in fact represents a set of genes.
   // -----------------------------------------------------------------
   if (a_xmlElement == null || !(a_xmlElement.getTagName().equals(GENES_TAG))) {
     throw new ImproperXMLException(
         "Unable to build Chromosome instance from XML Element: "
             + "given Element is not a 'genes' element.");
   }
   List genes = Collections.synchronizedList(new ArrayList());
   // Extract the nested gene elements.
   // ---------------------------------
   NodeList geneElements = a_xmlElement.getElementsByTagName(GENE_TAG);
   if (geneElements == null) {
     throw new ImproperXMLException(
         "Unable to build Gene instances from XML Element: "
             + "'"
             + GENE_TAG
             + "'"
             + " sub-elements not found.");
   }
   // For each gene, get the class attribute so we know what class
   // to instantiate to represent the gene instance, and then find
   // the child text node, which is where the string representation
   // of the allele is located, and extract the representation.
   // -------------------------------------------------------------
   int numberOfGeneNodes = geneElements.getLength();
   for (int i = 0; i < numberOfGeneNodes; i++) {
     Element thisGeneElement = (Element) geneElements.item(i);
     thisGeneElement.normalize();
     // Fetch the class attribute and create an instance of that
     // class to represent the current gene.
     // --------------------------------------------------------
     String geneClassName = thisGeneElement.getAttribute(CLASS_ATTRIBUTE);
     Gene thisGeneObject;
     Class geneClass = null;
     try {
       geneClass = Class.forName(geneClassName);
       try {
         Constructor constr = geneClass.getConstructor(new Class[] {Configuration.class});
         thisGeneObject = (Gene) constr.newInstance(new Object[] {a_activeConfiguration});
       } catch (NoSuchMethodException nsme) {
         // Try it by calling method newGeneInternal.
         // -----------------------------------------
         Constructor constr = geneClass.getConstructor(new Class[] {});
         thisGeneObject = (Gene) constr.newInstance(new Object[] {});
         thisGeneObject =
             (Gene)
                 PrivateAccessor.invoke(
                     thisGeneObject, "newGeneInternal", new Class[] {}, new Object[] {});
       }
     } catch (Throwable e) {
       throw new GeneCreationException(geneClass, e);
     }
     // Find the text node and fetch the string representation of
     // the allele.
     // ---------------------------------------------------------
     NodeList children = thisGeneElement.getChildNodes();
     int childrenSize = children.getLength();
     String alleleRepresentation = null;
     for (int j = 0; j < childrenSize; j++) {
       Element alleleElem = (Element) children.item(j);
       if (alleleElem.getTagName().equals(ALLELE_TAG)) {
         alleleRepresentation = alleleElem.getAttribute("value");
       }
       if (children.item(j).getNodeType() == Node.TEXT_NODE) {
         // We found the text node. Extract the representation.
         // ---------------------------------------------------
         alleleRepresentation = children.item(j).getNodeValue();
         break;
       }
     }
     // Sanity check: Make sure the representation isn't null.
     // ------------------------------------------------------
     if (alleleRepresentation == null) {
       throw new ImproperXMLException(
           "Unable to build Gene instance from XML Element: "
               + "value (allele) is missing representation.");
     }
     // Now set the value of the gene to that reflect the
     // string representation.
     // -------------------------------------------------
     try {
       thisGeneObject.setValueFromPersistentRepresentation(alleleRepresentation);
     } catch (UnsupportedOperationException e) {
       throw new GeneCreationException(
           "Unable to build Gene because it does not support the "
               + "setValueFromPersistentRepresentation() method.");
     }
     // Finally, add the current gene object to the list of genes.
     // ----------------------------------------------------------
     genes.add(thisGeneObject);
   }
   return (Gene[]) genes.toArray(new Gene[genes.size()]);
 }