private Table buildFromChild(VarsContext context) {
Table table = new Table();
for (Node<?> childNode : getChildNodes()) {
if (childNode instanceof TableRowNode) {
TableRowNode row = (TableRowNode) childNode;
try {
table.addRow(row.build(context));
} catch (SyntaxException e) {
throw new SyntaxException(row.getLine(), e.getMessage());
}
}
}
return table;
}
public void addBody(Body body)
throws SAXException, WingException, UIException, SQLException, IOException,
AuthorizeException {
// If we are actually editing information of an uploaded file,
// then display that body instead!
if (this.editFile != null) {
editFile.addBody(body);
return;
}
// Get a list of all files in the original bundle
Item item = submission.getItem();
Collection collection = submission.getCollection();
String actionURL =
contextPath + "/handle/" + collection.getHandle() + "/submit/" + knot.getId() + ".continue";
boolean disableFileEditing =
(submissionInfo.isInWorkflow())
&& !ConfigurationManager.getBooleanProperty("workflow", "reviewer.file-edit");
Bundle[] bundles = item.getBundles("ORIGINAL");
Bitstream[] bitstreams = new Bitstream[0];
if (bundles.length > 0) {
bitstreams = bundles[0].getBitstreams();
}
// Part A:
// First ask the user if they would like to upload a new file (may be the first one)
Division div =
body.addInteractiveDivision(
"submit-upload", actionURL, Division.METHOD_MULTIPART, "primary submission");
div.setHead(T_submission_head);
addSubmissionProgressList(div);
List upload = null;
if (!disableFileEditing) {
// Only add the upload capabilities for new item submissions
upload = div.addList("submit-upload-new", List.TYPE_FORM);
upload.setHead(T_head);
addRioxxVersionSection(upload, item);
File file = upload.addItem().addFile("file");
file.setLabel(T_file);
file.setHelp(T_file_help);
file.setRequired();
// if no files found error was thrown by processing class, display it!
if (this.errorFlag == org.dspace.submit.step.UploadStep.STATUS_NO_FILES_ERROR) {
file.addError(T_file_error);
}
// if an upload error was thrown by processing class, display it!
if (this.errorFlag == org.dspace.submit.step.UploadStep.STATUS_UPLOAD_ERROR) {
file.addError(T_upload_error);
}
// if virus checking was attempted and failed in error then let the user know
if (this.errorFlag == org.dspace.submit.step.UploadStep.STATUS_VIRUS_CHECKER_UNAVAILABLE) {
file.addError(T_virus_checker_error);
}
// if virus checking was attempted and a virus found then let the user know
if (this.errorFlag == org.dspace.submit.step.UploadStep.STATUS_CONTAINS_VIRUS) {
file.addError(T_virus_error);
}
Text description = upload.addItem().addText("description");
description.setLabel(T_description);
description.setHelp(T_description_help);
Button uploadSubmit = upload.addItem().addButton("submit_upload");
uploadSubmit.setValue(T_submit_upload);
}
make_sherpaRomeo_submission(item, div);
// Part B:
// If the user has already uploaded files provide a list for the user.
if (bitstreams.length > 0 || disableFileEditing) {
Table summary = div.addTable("submit-upload-summary", (bitstreams.length * 2) + 2, 7);
summary.setHead(T_head2);
Row header = summary.addRow(Row.ROLE_HEADER);
header.addCellContent(T_column0); // primary bitstream
header.addCellContent(T_column1); // select checkbox
header.addCellContent(T_column2); // file name
header.addCellContent(T_column3); // size
header.addCellContent(T_column4); // description
header.addCellContent(T_column5); // format
header.addCellContent(T_column6); // edit button
for (Bitstream bitstream : bitstreams) {
int id = bitstream.getID();
String name = bitstream.getName();
String url = makeBitstreamLink(item, bitstream);
long bytes = bitstream.getSize();
String desc = bitstream.getDescription();
String algorithm = bitstream.getChecksumAlgorithm();
String checksum = bitstream.getChecksum();
Row row = summary.addRow();
// Add radio-button to select this as the primary bitstream
Radio primary = row.addCell().addRadio("primary_bitstream_id");
primary.addOption(String.valueOf(id));
// If this bitstream is already marked as the primary bitstream
// mark it as such.
if (bundles[0].getPrimaryBitstreamID() == id) {
primary.setOptionSelected(String.valueOf(id));
}
if (!disableFileEditing) {
// Workflow users can not remove files.
CheckBox remove = row.addCell().addCheckBox("remove");
remove.setLabel("remove");
remove.addOption(id);
} else {
row.addCell();
}
row.addCell().addXref(url, name);
row.addCellContent(bytes + " bytes");
if (desc == null || desc.length() == 0) {
row.addCellContent(T_unknown_name);
} else {
row.addCellContent(desc);
}
BitstreamFormat format = bitstream.getFormat();
if (format == null) {
row.addCellContent(T_unknown_format);
} else {
int support = format.getSupportLevel();
Cell cell = row.addCell();
cell.addContent(format.getMIMEType());
cell.addContent(" ");
switch (support) {
case 1:
cell.addContent(T_supported);
break;
case 2:
cell.addContent(T_known);
break;
case 3:
cell.addContent(T_unsupported);
break;
}
}
Button edit = row.addCell().addButton("submit_edit_" + id);
edit.setValue(T_submit_edit);
Row checksumRow = summary.addRow();
checksumRow.addCell();
Cell checksumCell = checksumRow.addCell(null, null, 0, 6, null);
checksumCell.addHighlight("bold").addContent(T_checksum);
checksumCell.addContent(" ");
checksumCell.addContent(algorithm + ":" + checksum);
}
if (!disableFileEditing) {
// Workflow users can not remove files.
Row actionRow = summary.addRow();
actionRow.addCell();
Button removeSeleceted =
actionRow.addCell(null, null, 0, 6, null).addButton("submit_remove_selected");
removeSeleceted.setValue(T_submit_remove);
}
upload = div.addList("submit-upload-new-part2", List.TYPE_FORM);
}
// Part C:
// add standard control/paging buttons
addControlButtons(upload);
}
@Override
public void addBody(Body body)
throws SAXException, WingException, UIException, SQLException, IOException,
AuthorizeException {
Request request = ObjectModelHelper.getRequest(objectModel);
DSpaceObject dso = HandleUtil.obtainHandle(objectModel);
// Set up the major variables
// Collection collection = (Collection) dso;
// Build the collection viewer division.
// Make sure we get our results
queryResults = getQueryResponse(dso);
if (this.queryResults != null) {
Map<String, List<DiscoverResult.FacetResult>> facetFields =
this.queryResults.getFacetResults();
if (facetFields == null) {
facetFields = new LinkedHashMap<String, List<DiscoverResult.FacetResult>>();
}
// facetFields.addAll(this.queryResults.getFacetDates());
if (facetFields.size() > 0) {
String facetField =
String.valueOf(facetFields.keySet().toArray(new String[facetFields.size()])[0]);
java.util.List<DiscoverResult.FacetResult> values = facetFields.get(facetField);
if (values != null && 0 < values.size()) {
Division results = body.addDivision("browse-by-" + facetField + "-results", "primary");
results.setHead(
message(
"xmlui.ArtifactBrowser.AbstractSearch.type_"
+ request.getParameter(FACET_FIELD)
+ "_browse"));
// Find our faceting offset
int offSet = queryArgs.getFacetOffset();
if (offSet == -1) {
offSet = 0;
}
// Only show the nextpageurl if we have at least one result following our current results
String nextPageUrl = null;
if (values.size() == (DEFAULT_PAGE_SIZE + 1)) {
nextPageUrl = getNextPageURL(request);
}
results.setSimplePagination(
(int) queryResults.getDspaceObjects().size(),
offSet + 1,
(offSet + (values.size() - 1)),
getPreviousPageURL(request),
nextPageUrl);
Table singleTable =
results.addTable(
"browse-by-" + facetField + "-results",
(int) (queryResults.getDspaceObjects().size() + 1),
1);
List<String> filterQueries = new ArrayList<String>();
if (request.getParameterValues("fq") != null) {
filterQueries = Arrays.asList(request.getParameterValues("fq"));
}
for (int i = 0; i < values.size(); i++) {
DiscoverResult.FacetResult value = values.get(i);
String displayedValue = value.getDisplayedValue();
String filterQuery = value.getAsFilterQuery();
// if(field.getGap() != null){
// //We have a date get the year so we can display it
// DateFormat simpleDateformat = new
// SimpleDateFormat("yyyy");
// displayedValue =
// simpleDateformat.format(SolrServiceImpl.toDate(displayedValue));
// filterQuery =
// ClientUtils.escapeQueryChars(value.getFacetField().getName()) + ":" + displayedValue
// + "*";
// }
Cell cell = singleTable.addRow().addCell();
// No use in selecting the same filter twice
if (filterQueries.contains(filterQuery)) {
cell.addContent(displayedValue + " (" + value.getCount() + ")");
} else {
cell.addXref(
contextPath
+ (dso == null ? "" : "/handle/" + dso.getHandle())
+ "/discover?"
+ "&fq="
+ URLEncoder.encode(filterQuery, "UTF-8")
+ (request.getQueryString() != null ? "&" + request.getQueryString() : ""),
displayedValue + " (" + value.getCount() + ")");
}
}
}
}
}
// DSpaceObject dso = HandleUtil.obtainHandle(objectModel);
/*
if (dso != null)
{
if (dso instanceof Collection)
{
browseContext.addItem().addXref(contextPath + "/discovery/?q=search.resourcetype%3A2+AND+location%3Al" + dso.getID(), T_head_this_collection );
}
if (dso instanceof Community)
{
browseContext.addItem().addXref(contextPath + "/discovery/?q=search.resourcetype%3A2+AND+location%3Am" + dso.getID(), T_head_this_community );
}
}
browseGlobal.addItem().addXref(contextPath + "/discovery/?q=search.resourcetype%3A2", T_head_all_of_dspace );
*/
}
@Override
public void generateAccess(
String accessFilename,
int rowCount,
List<FieldDefinition> fieldDefinitionList,
int tableCount) {
long startTime = new Date().getTime();
outputWriterHolder.writeValueInLine("Access data generation started");
Database db = null;
try {
db = DatabaseBuilder.create(Database.FileFormat.V2010, new File(accessFilename));
// New table
int columnCount = fieldDefinitionList.size();
// Create Hash Map of Field Definitions
Map<Integer, Input2TableInfo> input2TableInfoMap = new LinkedHashMap<>(columnCount);
Map<Table, List<Object[]>> tableToGeneratedData = new HashMap<>();
for (int i = 0; i < columnCount; i++) {
Input2TableInfo input2TableInfo = new Input2TableInfo();
FieldDefinition fieldDefinition = fieldDefinitionList.get(i);
input2TableInfo.setFieldText(fieldDefinition.getFieldName());
input2TableInfo.setFieldDefinition(fieldDefinition);
input2TableInfo.initGenerator();
input2TableInfoMap.put(i, input2TableInfo);
}
if (tableCount > 1) {
List<Table> tableListForGeneration = new ArrayList<>();
for (int i = 0; i < tableCount; i++) {
TableBuilder tableBuilder = new TableBuilder("dataTable_" + i);
for (Integer key : input2TableInfoMap.keySet()) {
Input2TableInfo input2TableInfo = input2TableInfoMap.get(key);
tableBuilder.addColumn(
new ColumnBuilder(input2TableInfo.getFieldText())
.setSQLType(getType(input2TableInfo.getFieldDefinition().getType())));
}
tableListForGeneration.add(tableBuilder.toTable(db));
}
CountDownLatch startSignal = new CountDownLatch(1);
CountDownLatch doneSignal;
doneSignal = new CountDownLatch(tableCount);
ParameterVault parameterVault = new DefaultParameterVault(0, rowCount);
TableProcessor tableProcessor1 =
new TableProcessor(
parameterVault,
startSignal,
doneSignal,
tableListForGeneration.get(0),
columnCount,
input2TableInfoMap,
outputWriterHolder,
tableToGeneratedData);
new Thread(tableProcessor1, "Processor-" + tableCount).start();
for (int i = 1; i < tableCount; i++) {
ParameterVault parameterVaultRest = new DefaultParameterVault(i, rowCount);
TableProcessor tableProcessor =
new TableProcessor(
parameterVaultRest,
startSignal,
doneSignal,
tableListForGeneration.get(i),
columnCount,
input2TableInfoMap,
outputWriterHolder,
tableToGeneratedData);
new Thread(tableProcessor, "Processor-" + i).start();
}
startSignal.countDown();
doneSignal.await();
} else {
TableBuilder tableBuilder = new TableBuilder("dataTable_0");
for (Integer key : input2TableInfoMap.keySet()) {
Input2TableInfo input2TableInfo = input2TableInfoMap.get(key);
tableBuilder.addColumn(
new ColumnBuilder(input2TableInfo.getFieldText())
.setSQLType(getType(input2TableInfo.getFieldDefinition().getType())));
}
ParameterVault parameterVault = new DefaultParameterVault(0, rowCount);
new TableProcessor(outputWriterHolder)
.generateTableData(
parameterVault,
tableBuilder.toTable(db),
columnCount,
input2TableInfoMap,
tableToGeneratedData);
}
outputWriterHolder.writeValueInLine("Access data generation finished.");
long generationTime = new Date().getTime();
outputWriterHolder.writeValueInLine(
"Time used " + ((generationTime - startTime) / 1000) + " sec");
outputWriterHolder.writeValueInLine("Writing to file.");
for (Map.Entry<Table, List<Object[]>> tableListEntry : tableToGeneratedData.entrySet()) {
Table table = tableListEntry.getKey();
List<Object[]> rowListForTable = tableListEntry.getValue();
for (Object[] row : rowListForTable) {
table.addRow(row);
}
}
long writeTime = new Date().getTime();
outputWriterHolder.writeValueInLine(
"Time used " + ((writeTime - generationTime) / 1000) + " sec");
outputWriterHolder.writeValueInLine(
"Total time used " + ((writeTime - startTime) / 1000) + " sec");
outputWriterHolder.writeValueInLine("Done");
} catch (Exception e) {
LOGGER.error(e.getMessage(), e);
} finally {
try {
if (db != null) {
db.close();
}
} catch (IOException e) {
LOGGER.error(e.getMessage(), e);
}
}
}