/** Quit using a separate thread, hopefully avoiding thread deadlocks. */ public void run() { quitting = true; boolean changes = false; int[] wList = WindowManager.getIDList(); if (wList != null) { for (int i = 0; i < wList.length; i++) { ImagePlus imp = WindowManager.getImage(wList[i]); if (imp != null && imp.changes == true) { changes = true; break; } } } Frame[] frames = WindowManager.getNonImageWindows(); if (frames != null) { for (int i = 0; i < frames.length; i++) { if (frames[i] != null && (frames[i] instanceof Editor)) { if (((Editor) frames[i]).fileChanged()) { changes = true; break; } } } } if (windowClosed && !changes && Menus.window.getItemCount() > Menus.WINDOW_MENU_ITEMS && !(IJ.macroRunning() && WindowManager.getImageCount() == 0)) { GenericDialog gd = new GenericDialog("ImageJ", this); gd.addMessage("Are you sure you want to quit ImageJ?"); gd.showDialog(); quitting = !gd.wasCanceled(); windowClosed = false; } if (!quitting) return; if (!WindowManager.closeAllWindows()) { quitting = false; return; } // IJ.log("savePreferences"); if (applet == null) { saveWindowLocations(); Prefs.savePreferences(); } IJ.cleanup(); // setVisible(false); // IJ.log("dispose"); dispose(); if (exitWhenQuitting) System.exit(0); }
public void itemStateChanged(ItemEvent e) { ImagePlus imp = WindowManager.getCurrentImage(); if (imp == null) return; if (!imp.isComposite()) { int channels = imp.getNChannels(); if (channels == 1 && imp.getStackSize() <= 4) channels = imp.getStackSize(); if (imp.getBitDepth() == 24 || (channels > 1 && channels < CompositeImage.MAX_CHANNELS)) { GenericDialog gd = new GenericDialog(imp.getTitle()); gd.addMessage("Convert to multi-channel composite image?"); gd.showDialog(); if (gd.wasCanceled()) return; else IJ.doCommand("Make Composite"); } else { IJ.error( "Channels", "A composite image is required (e.g., " + moreLabel + " Open HeLa Cells),\nor create one using " + moreLabel + " Make Composite."); return; } } if (!imp.isComposite()) return; CompositeImage ci = (CompositeImage) imp; Object source = e.getSource(); if (source == choice) { int index = ((Choice) source).getSelectedIndex(); switch (index) { case 0: ci.setMode(IJ.COMPOSITE); break; case 1: ci.setMode(IJ.COLOR); break; case 2: ci.setMode(IJ.GRAYSCALE); break; } ci.updateAndDraw(); if (Recorder.record) { String mode = null; switch (index) { case 0: mode = "composite"; break; case 1: mode = "color"; break; case 2: mode = "grayscale"; break; } Recorder.record("Stack.setDisplayMode", mode); } } else if (source instanceof Checkbox) { for (int i = 0; i < checkbox.length; i++) { Checkbox cb = (Checkbox) source; if (cb == checkbox[i]) { if (ci.getMode() == IJ.COMPOSITE) { boolean[] active = ci.getActiveChannels(); active[i] = cb.getState(); if (Recorder.record) { String str = ""; for (int c = 0; c < ci.getNChannels(); c++) str += active[c] ? "1" : "0"; Recorder.record("Stack.setActiveChannels", str); Recorder.record("//Stack.toggleChannel", imp.getChannel()); } } else { imp.setPosition(i + 1, imp.getSlice(), imp.getFrame()); if (Recorder.record) Recorder.record("Stack.setChannel", i + 1); } ci.updateAndDraw(); return; } } } }