private void updateFields() {
deLongNameValueLabel.setText(tempDE.getLongName());
deIdValueLabel.setText(ConventionUtil.publicIdVersion(tempDE));
if (tempDE.getContext() != null) deContextNameValueLabel.setText(tempDE.getContext().getName());
else deContextNameValueLabel.setText("");
if (tempDE.getValueDomain() != null)
vdLongNameValueLabel.setText(tempDE.getValueDomain().getLongName());
else vdLongNameValueLabel.setText("");
if (prefs.getShowConceptCodeNameSummary()) {
List<gov.nih.nci.ncicb.cadsr.domain.Concept> concepts =
cadsrModule.getConcepts(tempDE.getDataElementConcept().getProperty());
if (concepts != null && concepts.size() > 0) {
StringBuffer conceptCodeSummary = new StringBuffer();
StringBuffer conceptNameSummary = new StringBuffer();
for (Concept con : concepts) {
conceptCodeSummary.append(con.getPreferredName());
conceptCodeSummary.append(" ");
conceptNameSummary.append(con.getLongName());
conceptNameSummary.append(" ");
}
conceptCodeSummaryValue.setText(conceptCodeSummary.toString());
conceptNameSummaryValue.setText(conceptNameSummary.toString());
}
}
enableCDELinks();
}
private void clear() {
disableCDELinks();
tempDE = DomainObjectFactory.newDataElement();
ValueDomain vd = DomainObjectFactory.newValueDomain();
List<AttributeDatatypePair> attTypesPairs =
ElementsLists.getInstance().getElements(new AttributeDatatypePair("", ""));
String datatype = null;
String attributeName = LookupUtil.lookupFullName(de);
for (AttributeDatatypePair pair : attTypesPairs) {
if (pair.getAttributeName().equals(attributeName)) {
datatype = pair.getDatatype();
}
}
if (datatype == null) datatype = "";
else {
if (DatatypeMapping.getKeys().contains(datatype.toLowerCase()))
datatype = DatatypeMapping.getMapping().get(datatype.toLowerCase());
}
vd.setLongName(datatype);
tempDE.setValueDomain(vd);
deLongNameValueLabel.setText("");
deIdValueLabel.setText("");
deContextNameValueLabel.setText("");
vdLongNameValueLabel.setText("");
conceptCodeSummaryValue.setText("");
conceptNameSummaryValue.setText("");
}
public void setFiles(String file1, String file2) {
if (file1 == null || file2 == null) {
reportLabel.setText("<html>Report Generation Failed. <br>" + file2 + "</html>");
} else {
if (file2.endsWith(".csv")) {
reportLabel.setText(
"<html>Semantic Connector Report for the file:<br><div align=center> "
+ file1
+ " </div>was created. <br><br> The output report can be found here: <br><div align=center>"
+ file2
+ "</div></html>");
} else {
reportLabel.setText(
"<html>Annotation of file <br><div align=center> "
+ file1
+ " </div>was completed. <br><br> The Annotated XMI can be found here: <br><div align=center>"
+ file2
+ "</div></html>");
}
}
}
public void updateNode(UMLNode node) {
this.node = node;
if ((node.getUserObject() instanceof DataElement)) {
de = (DataElement) node.getUserObject();
if (de.getPublicId() != null) {
deLongNameValueLabel.setText("<html><body>" + de.getLongName() + "</body></html>");
deIdValueLabel.setText(de.getPublicId() + " v" + de.getVersion());
deContextNameValueLabel.setText(de.getContext().getName());
vdLongNameValueLabel.setText(de.getValueDomain().getLongName());
// if preference is set to show Concept Summary, then :
// call cadsrModulde.getConcepts(de.getDataElementConcept().getProperty())
// and show the 2 fields
if (prefs.getShowConceptCodeNameSummary()) {
List<gov.nih.nci.ncicb.cadsr.domain.Concept> concepts =
cadsrModule.getConcepts(de.getDataElementConcept().getProperty());
if (concepts != null && concepts.size() > 0) {
StringBuffer conceptCodeSummary = new StringBuffer();
StringBuffer conceptNameSummary = new StringBuffer();
for (Concept con : concepts) {
conceptCodeSummary.append(con.getPreferredName());
conceptCodeSummary.append(" ");
conceptNameSummary.append(con.getLongName());
conceptNameSummary.append(" ");
}
conceptCodeSummaryValue.setText(conceptCodeSummary.toString());
conceptNameSummaryValue.setText(conceptNameSummary.toString());
}
}
enableCDELinks();
} else clear();
firePropertyChangeEvent(
new PropertyChangeEvent(
this, ButtonPanel.SWITCH, null, StringUtil.isEmpty(de.getPublicId())));
}
}
public void setOutputText(String text) {
reportLabel.setText("<html>" + text + "</html>");
}
private void disableCDELinks() {
cdeBrowserLinkValueLabel.setVisible(false);
cdeBrowserLinkValueLabel.setText("");
}
private void enableCDELinks() {
cdeBrowserLinkValueLabel.setVisible(true);
cdeBrowserLinkValueLabel.setText(getCDEBrowserURL());
cdeBrowserLinkValueLabel.setForeground(Color.BLUE);
}