private List<ICategorialClassRecord> createInput1() {
CategorialClass ts = getTissueSpecimen();
CategorialClass reviewEventParams = getReviewEventParameters();
CategorialClass scg = getSCG();
CategorialClass participant = getParticipant();
ts.addChildCategorialClass(reviewEventParams);
ts.addChildCategorialClass(scg);
scg.addChildCategorialClass(participant);
List<ICategorialClassRecord> scgRecs = createRecord(scg, 1);
scgRecs.get(0).addCategorialClassRecords(participant, createRecord(participant, 2));
List<ICategorialClassRecord> tsRecs = createRecord(ts, 2);
tsRecs.get(0).addCategorialClassRecords(scg, scgRecs);
tsRecs.get(0).addCategorialClassRecords(reviewEventParams, createRecord(reviewEventParams, 1));
List<ICategorialClassRecord> scgRecsMore = createRecord(scg, 2);
scgRecsMore.get(1).addCategorialClassRecords(participant, createRecord(participant, 3));
scgRecsMore.get(0).addCategorialClassRecords(participant, createRecord(participant, 2));
tsRecs.get(1).addCategorialClassRecords(scg, scgRecsMore);
tsRecs.get(1).addCategorialClassRecords(reviewEventParams, createRecord(reviewEventParams, 1));
return tsRecs;
}
/**
* Mock method for creating category records.
*
* @param catClass
* @param howMany
* @return
*/
private List<ICategorialClassRecord> createRecord(CategorialClass catClass, int howMany) {
List<ICategorialClassRecord> records = new ArrayList<ICategorialClassRecord>(howMany);
Collection<AttributeInterface> collection =
catClass.getCategorialClassEntity().getAttributeCollection();
Set<AttributeInterface> set = new HashSet<AttributeInterface>(collection);
for (int i = 0; i < howMany; i++) {
ICategorialClassRecord record =
QueryResultFactory.createCategorialClassRecord(
catClass, set, new RecordId(recordId++ + "", ""));
for (AttributeInterface attr : record.getAttributes()) {
record.putStringValueForAttribute(attr, attr.getName() + "_R_" + counter);
}
records.add(record);
counter++;
}
return records;
}
/*
* Creating record structure like
*
* p0 | |-->cpr0-->cp0 |-->cpr1-->cp1 |-->scg0 |-->ts0 |-->ts1 | |-->ms0
* |-->ms1 |-->ms2
*
* p1 | |-->cpr2-->cp2 |-->scg1 |-->ts2 |-->ts3 | |-->ms3 |-->ms4
*
* p0 cpr0 cp0 scg0 ts0 ms0 p0 cpr0 cp0 scg0 ts0 ms1 p0 cpr0 cp0 scg0 ts0
* ms2 p0 cpr0 cp0 scg0 ts1 ms0 p0 cpr0 cp0 scg0 ts1 ms1 p0 cpr0 cp0 scg0
* ts1 ms2
*
* p0 cpr1 cp1 scg0 ts0 ms0 p0 cpr1 cp1 scg0 ts0 ms1 p0 cpr1 cp1 scg0 ts0
* ms2 p0 cpr1 cp1 scg0 ts1 ms0 p0 cpr1 cp1 scg0 ts1 ms1 p0 cpr1 cp1 scg0
* ts1 ms2
*
* p1 cpr2 cp2 scg1 ts2 ms3 p1 cpr2 cp2 scg1 ts2 ms4 p1 cpr2 cp2 scg1 ts3
* ms3 p1 cpr2 cp2 scg1 ts3 ms4
*
*
* @return List<ICategorialClassRecord>
*/
private List<ICategorialClassRecord> createInput2() {
CategorialClass participant = getParticipant();
CategorialClass cpr = getCPR();
CategorialClass cp = getCP();
CategorialClass scg = getSCG();
CategorialClass ts = getTissueSpecimen();
CategorialClass ms = getMs();
participant.addChildCategorialClass(cpr);
participant.addChildCategorialClass(scg);
cpr.addChildCategorialClass(cp);
scg.addChildCategorialClass(ts);
scg.addChildCategorialClass(ms);
List<ICategorialClassRecord> cprRecs1 = createRecord(cpr, 1);
cprRecs1.get(0).addCategorialClassRecords(cp, createRecord(cp, 1));
List<ICategorialClassRecord> cprRecs = createRecord(cpr, 2);
cprRecs.get(0).addCategorialClassRecords(cp, createRecord(cp, 1));
cprRecs.get(1).addCategorialClassRecords(cp, createRecord(cp, 1));
List<ICategorialClassRecord> scgRec = createRecord(scg, 1);
scgRec.get(0).addCategorialClassRecords(ts, createRecord(ts, 2));
scgRec.get(0).addCategorialClassRecords(ms, createRecord(ms, 3));
List<ICategorialClassRecord> scgRec1 = createRecord(scg, 1);
scgRec1.get(0).addCategorialClassRecords(ts, createRecord(ts, 2));
scgRec1.get(0).addCategorialClassRecords(ms, createRecord(ms, 2));
List<ICategorialClassRecord> participantRecs = createRecord(participant, 2);
participantRecs.get(0).addCategorialClassRecords(cpr, cprRecs);
participantRecs.get(0).addCategorialClassRecords(scg, scgRec);
participantRecs.get(1).addCategorialClassRecords(cpr, cprRecs1);
participantRecs.get(1).addCategorialClassRecords(scg, scgRec1);
return participantRecs;
}
/**
* Mock Method for getting object for given class name.
*
* @param className
* @param attributes
* @return CategorialClass
*/
private CategorialClass get(String className, String... attributes) {
CategorialClass categorialClass = new CategorialClass();
EntityInterface entity = createEntity(className, attributes);
categorialClass.setCategorialClassEntity(entity);
return categorialClass;
}
