public void handleStartElement( OtterContentHandler theContentHandler, String namespaceURI, String localName, String qualifiedName, Attributes attributes) { // // should just push the mode - so subsequence tags know we're // dealing with a sequence fragment. super.handleStartElement(theContentHandler, namespaceURI, localName, qualifiedName, attributes); AssemblyFeature sequenceFragment = new AssemblyFeature(); // // pushes annotation on the stack so subsequence tags can // modify it. theContentHandler.pushStackObject(sequenceFragment); } // end handleTag