Most Popular Java Classes And Methods

1409501. TrackLoader (1)
1409502. TrackPanel (1)
1409503. TrackPanelComponent (1)
1409504. TrackProperties (1)
1409505. WindowFunction (1)
1409506. FilterTracksMenuAction (1)
1409507. IGV (1)
1409508. JCheckBoxMenuItem (1)
1409509. JMenu (1)
1409510. JMenuItem (1)
1409511. ColorUtilities (1)
1409512. FrameManager (1)
1409513. TrackPanel (1)
1409514. TrackPanelComponent (1)
1409515. FilterTracksMenuAction (1)
1409516. IGV (1)
1409517. JCheckBoxMenuItem (1)
1409518. JMenu (1)
1409519. JMenuItem (1)
1409520. FilterTracksMenuAction (1)
1409521. IGV (1)
1409522. JCheckBoxMenuItem (1)
1409523. JMenu (1)
1409524. JMenuItem (1)
1409525. MessageUtils (1)
1 fields
1409526. IGV (1)
3 fields
1409527. IntArrayList (1)
1409528. FileUtils (1)
1 fields
1409529. ParsingUtils (1)
4 fields
1409530. ResourceLocator (1)
6 fields
1409531. TestUtils (1)
1409532. VariantTrack (1)
1409533. Globals (1)
2 fields
1409534. PreferenceManager (1)
1 fields
1409535. LinearIndex (1)
1409536. Index (1)
1 fields
1409537. IndexFactory (1)
1 fields
1409538. AsciiLineReader (1)
1409539. LineIterator (1)
1 fields
1409540. ParsingUtils (1)
1 fields
1409541. AbstractFeatureReader (1)
2 fields
1409542. CloseableTribbleIterator (1)
1409543. FeatureCodec (1)
1409544. Event (1)
1409545. Math (1)
1409546. Stub (1)
1409547. GATKSAMIterator (1)
1409548. Covariate (1)
1409549. GATKReportTable (1)
1409550. AbstractStratification (1)
1409551. Arrays (1)
1409552. CallableStatus (1)
1409553. CountedData (1)
1409554. Event (1)
1409555. IntervalStratification (1)
1409556. Map (1)
1409557. Math (1)
1409558. Set (1)
1 fields
1409559. VariantAnnotatorEngine (1)
1409560. GATKVCFUtils (1)
2 fields
1409561. GenomeAnalysisEngine (1)
1409562. SampleUtils (1)
1409563. VariantAnnotatorEngine (1)
1409564. CountedData (1)
1409565. JVMUtils (1)
1409566. PluginManager (1)
1409567. NestedIntegerArray (1)
1 fields
1409568. CountedData (1)
1409569. List (1)
1409570. RodBinding (1)
1 fields
1409571. Set (1)
2 fields
1409572. VariantAnnotatorEngine (1)
1409573. VariantContext (1)
1409574. AlignmentContext (1)
2 fields
1409575. AlleleBiasedDownsamplingUtils (1)
1409576. AlleleList (1)
1409577. PerReadAlleleLikelihoodMap (1)
1409578. Haplotype (1)
1409579. GATKSAMIterator (1)
1409580. Math (1)
1409581. PairHMMModel (1)
1409582. PileupElement (1)
3 fields
1409583. ReadBackedPileup (1)
1409584. EventType (1)
1 fields
1409585. RecalibrationTables (1)
1409586. LocationAwareSeekableRODIterator (1)
1409587. RefMetaDataTracker (1)
1 fields
1409588. LoggingTestProvider (1)
1409589. AlignmentUtils (1)
1409590. GATKSAMRecord (1)
13 fields
1409591. ReadUtils (1)
1 fields
1409592. GATKVCFHeaderLines (1)
1 fields
1409593. BaseUtils (1)
1 fields
1409594. CalledState (1)
1409595. GenomeLoc (1)
2 fields
1409596. MathUtils (1)
1409597. QualityUtils (1)
2 fields
1409598. Utils (1)
1 fields
1409599. AddContextDataToRead (1)
1409600. RefAPISource (1)