public String parse(String serviceName, String fileName, int fileId, String ipAddr) {
logger.info("ABOUT TO PARSE!");
int i = 0;
try {
ArrayList messages = Utilities.separateMessages(fileName);
for (i = 0; i < messages.size(); i++) {
String msg = (String) messages.get(i);
MessageUploader.routeReport(serviceName, "TDIS", msg, fileId);
}
// Since the gdml labs show more than one lab on the same page when
// grouped
// by accession number their abnormal status must be updated to
// reflect the
// other labs that they are grouped with aswell
updateLabStatus(messages.size());
logger.info("Parsed OK");
} catch (Exception e) {
MessageUploader.clean(fileId);
logger.error("Could not upload message", e);
return null;
}
return ("success");
}
@Override
public ActionForward execute(
ActionMapping mapping,
ActionForm form,
HttpServletRequest request,
HttpServletResponse response) {
LoggedInInfo loggedInInfo = LoggedInInfo.getLoggedInInfoFromSession(request);
if (!securityInfoManager.hasPrivilege(loggedInInfo, "_lab", "w", null)) {
throw new SecurityException("missing required security object (_lab)");
}
LabUploadForm frm = (LabUploadForm) form;
FormFile importFile = frm.getImportFile();
String filename = importFile.getFileName();
String proNo = (String) request.getSession().getAttribute("user");
String outcome = "failure";
InputStream formFileIs = null;
InputStream localFileIs = null;
try {
formFileIs = importFile.getInputStream();
String type = request.getParameter("type");
if (type.equals("OTHER")) type = request.getParameter("otherType");
String filePath = Utilities.saveFile(formFileIs, filename);
File file = new File(filePath);
localFileIs = new FileInputStream(filePath);
int checkFileUploadedSuccessfully =
FileUploadCheck.addFile(file.getName(), localFileIs, proNo);
if (checkFileUploadedSuccessfully != FileUploadCheck.UNSUCCESSFUL_SAVE) {
logger.debug("filePath" + filePath);
logger.debug("Type :" + type);
MessageHandler msgHandler = HandlerClassFactory.getHandler(type);
if (msgHandler != null) {
logger.debug("MESSAGE HANDLER " + msgHandler.getClass().getName());
}
if ((msgHandler.parse(
loggedInInfo,
getClass().getSimpleName(),
filePath,
checkFileUploadedSuccessfully,
request.getRemoteAddr()))
!= null) outcome = "success";
} else {
outcome = "uploaded previously";
}
} catch (Exception e) {
logger.error("Error: ", e);
outcome = "exception";
} finally {
IOUtils.closeQuietly(formFileIs);
IOUtils.closeQuietly(localFileIs);
}
request.setAttribute("outcome", outcome);
return mapping.findForward("success");
}
