private void addToCache(Entity entity) {
    if (!entityDefinitionCache.getStatus().equals(Status.STATUS_ALIVE)) {
      return;
    }

    Element element = entityDefinitionCache.get(entity.getEntityVersionId());
    if (element != null) {
      log.debug("Updating an entity definition entry in the cache: " + entity);
    } else {
      log.debug("Adding an entity definition entry in the cache: " + entity);
    }
    element = new Element(entity.getEntityVersionId(), entity);
    entityDefinitionCache.put(element);
  }
  public Entity updateEntity(Entity entity) throws ApplicationException {
    if (entity == null) {
      return entity;
    }
    if (entity.getEntityVersionId() == null) {
      throw new ApplicationException(
          "An entity definition must first be created before it is updated.");
    }
    try {
      Date currentDate = new Date();
      entity.setDateChanged(currentDate);
      entity.setUserChangedBy(Context.getUserContext().getUser());
      for (EntityAttribute attrib : entity.getAttributes()) {
        if (attrib.getDateCreated() == null) {
          attrib.setDateCreated(currentDate);
          attrib.setUserCreatedBy(Context.getUserContext().getUser());
          // attrib.setEntity(entity);
        }
        attrib.setEntity(entity);
      }

      // Mark deletion attributes
      handleAttributeUpdates(entity);

      // remove validations for marked attribute
      for (EntityAttribute attrib : entity.getAttributes()) {
        if (attrib.getUserVoidedBy() != null) {

          // remove validations
          List<EntityAttributeValidation> existingValidations =
              loadEntityAttributeValidations(attrib);
          for (EntityAttributeValidation validation : existingValidations) {
            deleteEntityAttributeValidation(validation);
          }
        }
      }

      Entity updatedEntity = entityDefinitionDao.updateEntity(entity);
      updatedEntity = entityDefinitionDao.loadEntity(entity.getEntityVersionId());

      addToCache(updatedEntity);
      Context.notifyObserver(ObservationEventType.ENTITY_ATTRIBUTE_UPDATE_EVENT, entity);

      return updatedEntity;
    } catch (DaoException e) {
      throw new ApplicationException(e.getMessage());
    }
  }
  public Entity addEntity(Entity entity) throws ApplicationException {
    if (entity == null) {
      return null;
    }

    if (entity.getEntityVersionId() != null) {
      throw new ApplicationException(
          "This entity definition already exists so it can only be updated.");
    }

    validateNameUniqueness(entity);
    try {
      entity.setUserCreatedBy(Context.getUserContext().getUser());
      Date dateCreated = new Date();
      entity.setDateCreated(dateCreated);
      for (EntityAttribute attribute : entity.getAttributes()) {
        attribute.setDateCreated(dateCreated);
        attribute.setUserCreatedBy(Context.getUserContext().getUser());
        attribute.setEntity(entity);
      }
      entityDefinitionDao.addEntity(entity);
      addToCache(entity);
      Context.notifyObserver(ObservationEventType.ENTITY_ADD_EVENT, entity);
      return entity;
    } catch (DaoException e) {
      throw new ApplicationException(e.getMessage());
    }
  }
 private Entity findLatestEntityVersionByName(String name) {
   List<Entity> entities = findEntitiesByName(name);
   if (entities.size() == 0) {
     return null;
   }
   if (entities.size() == 1) {
     return entities.get(0);
   }
   Entity latestEntity = entities.get(0);
   for (Entity entity : entities) {
     if (entity.getEntityVersionId() > latestEntity.getEntityVersionId()) {
       latestEntity = entity;
     }
   }
   return latestEntity;
 }
  public void updateEntityAttributeGroups(List<EntityAttributeGroup> groups, Entity updatedEntity)
      throws ApplicationException {
    if (groups == null) {
      return;
    }

    Entity existing = entityDefinitionDao.loadEntity(updatedEntity.getEntityVersionId());
    List<EntityAttributeGroup> existingGroups = loadEntityAttributeGroups(existing);

    Map<Integer, EntityAttributeGroup> newGroupById = new HashMap<Integer, EntityAttributeGroup>();
    for (EntityAttributeGroup group : groups) {
      newGroupById.put(group.getEntityAttributeGroupId(), group);
    }

    // remove deleted groups
    for (EntityAttributeGroup group : existingGroups) {
      if (newGroupById.get(group.getEntityAttributeGroupId()) == null) {
        deleteEntityAttributeGroup(group);
      }
    }

    for (EntityAttributeGroup newgroup : groups) {
      if (newgroup.getEntityAttributeGroupId() != null) {
        updateEntityAttributeGroup(newgroup);
      } else {
        addEntityAttributeGroup(newgroup);
      }
    }
  }
  public void updateEntityAttributeValidations(
      List<EntityAttributeValidation> validations, Entity updatedEntity, String attributeName)
      throws ApplicationException {
    if (validations == null) {
      return;
    }

    Entity existing = entityDefinitionDao.loadEntity(updatedEntity.getEntityVersionId());
    EntityAttribute existingAttribute = existing.findAttributeByName(attributeName);
    List<EntityAttributeValidation> existingValidations =
        loadEntityAttributeValidations(existingAttribute);

    Map<Integer, EntityAttributeValidation> newValidationById =
        new HashMap<Integer, EntityAttributeValidation>();
    for (EntityAttributeValidation validation : validations) {
      if (validation.getEntityAttributeValidationId() != null) {
        newValidationById.put(validation.getEntityAttributeValidationId(), validation);
      }
    }

    // remove deleted validations
    for (EntityAttributeValidation validation : existingValidations) {
      if (newValidationById.get(validation.getEntityAttributeValidationId()) == null) {
        deleteEntityAttributeValidation(validation);
      }
    }

    for (EntityAttributeValidation newValidation : validations) {
      if (newValidation.getEntityAttributeValidationId() != null) {
        updateEntityAttributeValidation(newValidation);
      } else {
        addEntityAttributeValidation(newValidation);
      }
    }
  }
  private void handleAttributeUpdates(Entity entity) {
    Entity existing = entityDefinitionDao.loadEntity(entity.getEntityVersionId());

    Map<Integer, EntityAttribute> newAttribById = new HashMap<Integer, EntityAttribute>();
    for (EntityAttribute attribute : entity.getAttributes()) {
      newAttribById.put(attribute.getEntityAttributeId(), attribute);
    }
    // Mark for deletion attributes that were removed
    for (EntityAttribute attrib : existing.getAttributes()) {
      if (newAttribById.get(attrib.getEntityAttributeId()) == null) {
        attrib.setDateVoided(entity.getDateChanged());
        attrib.setUserVoidedBy(Context.getUserContext().getUser());
        entity.addAttribute(attrib);
      }
    }
  }
  /** Will export the entity passed in as the first parameter in the method into a file. */
  public String exportEntity(Entity entity, String filename) throws ApplicationException {
    if (entity == null) {
      return "";
    }

    String entityDefinition = exportEntity(entity.getEntityVersionId());
    try {

      // write to file
      File fileOut = new File(filename);
      BufferedWriter writer = null;

      writer = new BufferedWriter(new FileWriter(fileOut));

      writer.write(entityDefinition);
      writer.close();

      return entityDefinition;

    } catch (IOException e) {
      throw new RuntimeException("Unable to write new output file: " + filename);
    }
  }
 public void deleteEntity(Entity entity) throws ApplicationException {
   if (entity == null) {
     return;
   }
   if (entity.getEntityVersionId() == null) {
     throw new ApplicationException(
         "An entity definition must first be created before it is deleted.");
   }
   try {
     Date dateVoided = new Date();
     entity.setDateVoided(dateVoided);
     entity.setUserVoidedBy(Context.getUserContext().getUser());
     for (EntityAttribute attribute : entity.getAttributes()) {
       attribute.setDateVoided(dateVoided);
       attribute.setUserVoidedBy(Context.getUserContext().getUser());
       attribute.setEntity(entity);
     }
     entityDefinitionDao.updateEntity(entity);
     addToCache(entity);
   } catch (DaoException e) {
     throw new ApplicationException(e.getMessage());
   }
 }
  @Override
  public LoggedLinkListWeb getLoggedLinks(LoggedLinkSearchCriteriaWeb search) throws Exception {
    authenticateCaller();
    try {
      AuditEventService auditEventService = Context.getAuditEventService();
      EntityDefinitionManagerService entityDefService = Context.getEntityDefinitionManagerService();
      RecordQueryService entityInstanceService = Context.getRecordQueryService();

      LoggedLinkListWeb loggedLinkList = new LoggedLinkListWeb();

      // entity model
      EntityWeb entityModel = search.getEntityModel();
      Entity entityDef = entityDefService.loadEntity(entityModel.getEntityVersionId());
      if (entityDef == null) {
        loggedLinkList.setTotalCount(0);
        loggedLinkList.setRecordPairs(new java.util.ArrayList<RecordLinkWeb>());
        return loggedLinkList;
      }

      //  total count
      int totalCount =
          auditEventService.getLoggedLinksCount(entityDef.getEntityVersionId(), search.getVector());
      if (totalCount == 0) {
        loggedLinkList.setTotalCount(0);
        loggedLinkList.setRecordPairs(new java.util.ArrayList<RecordLinkWeb>());
        return loggedLinkList;
      }

      // link logs
      List<LoggedLink> links =
          auditEventService.getLoggedLinks(
              entityDef.getEntityVersionId(),
              search.getVector(),
              search.getFirstResult(),
              search.getMaxResults());

      List<RecordLinkWeb> recordLinks = new java.util.ArrayList<RecordLinkWeb>();
      for (LoggedLink link : links) {

        Record leftRecord = entityInstanceService.loadRecordById(entityDef, link.getLeftRecordId());
        Record rightRecord =
            entityInstanceService.loadRecordById(entityDef, link.getRightRecordId());

        if (leftRecord != null && rightRecord != null) {
          RecordLinkWeb recordLinkWeb = new RecordLinkWeb();
          recordLinkWeb.setWeight(link.getWeight());
          recordLinkWeb.setVector(link.getVectorValue());
          recordLinkWeb.setDateCreated(link.getDateCreated());
          recordLinkWeb.setLeftRecord(ModelTransformer.mapToRecord(leftRecord, RecordWeb.class));
          recordLinkWeb.setRightRecord(ModelTransformer.mapToRecord(rightRecord, RecordWeb.class));

          if (link.getUserCreatedBy() != null) {
            UserWeb user =
                ModelTransformer.mapToUser(link.getUserCreatedBy(), UserWeb.class, false);
            recordLinkWeb.setUserCreatedBy(user);
          }

          recordLinks.add(recordLinkWeb);
        }
      }

      loggedLinkList.setTotalCount(totalCount);
      loggedLinkList.setRecordPairs(recordLinks);

      return loggedLinkList;
    } catch (Throwable t) {
      log.error("Failed to execute: " + t.getMessage(), t);
      throw new RuntimeException(t);
    }
  }