private DicomObject mkStgCmtResult(Association as, DicomObject rqdata) {
DicomObject result = new BasicDicomObject();
result.putString(Tag.TransactionUID, VR.UI, rqdata.getString(Tag.TransactionUID));
DicomElement rqsq = rqdata.get(Tag.ReferencedSOPSequence);
DicomElement resultsq = result.putSequence(Tag.ReferencedSOPSequence);
if (stgcmtRetrieveAET != null) {
result.putString(Tag.RetrieveAETitle, VR.AE, stgcmtRetrieveAET);
}
DicomElement failedsq = null;
File dir = getDir(as);
for (int i = 0, n = rqsq.countItems(); i < n; i++) {
DicomObject rqItem = rqsq.getDicomObject(i);
String uid = rqItem.getString(Tag.ReferencedSOPInstanceUID);
DicomObject resultItem = new BasicDicomObject();
rqItem.copyTo(resultItem);
if (stgcmtRetrieveAETs != null) {
resultItem.putString(Tag.RetrieveAETitle, VR.AE, stgcmtRetrieveAETs);
}
File f = new File(dir, uid);
if (f.isFile()) {
resultsq.addDicomObject(resultItem);
} else {
resultItem.putInt(Tag.FailureReason, VR.US, NO_SUCH_OBJECT_INSTANCE);
if (failedsq == null) {
failedsq = result.putSequence(Tag.FailedSOPSequence);
}
failedsq.addDicomObject(resultItem);
}
}
return result;
}
private DicomObject toSCN(DicomObject ian) {
DicomObject scn = new BasicDicomObject();
scn.putString(Tag.PatientID, VR.LO, ian.getString(Tag.PatientID));
scn.putString(Tag.PatientName, VR.PN, ian.getString(Tag.PatientName));
scn.putString(Tag.StudyID, VR.SH, ian.getString(Tag.StudyID));
scn.putString(Tag.StudyInstanceUID, VR.UI, ian.getString(Tag.StudyInstanceUID));
DicomElement ianSeriesSeq = ian.get(Tag.ReferencedSeriesSequence);
DicomElement scnSeriesSeq = scn.putSequence(Tag.ReferencedSeriesSequence);
DicomObject ianSeriesItem, scnSeriesItem, scnSOPItem;
DicomElement ianSOPSeq, scnSOPSeq;
for (int i = 0, n = ianSeriesSeq.countItems(); i < n; ++i) {
ianSeriesItem = ianSeriesSeq.getDicomObject(i);
scnSeriesItem = new BasicDicomObject();
scnSeriesItem.putString(
Tag.SeriesInstanceUID, VR.UI, ianSeriesItem.getString(Tag.SeriesInstanceUID));
scnSeriesSeq.addDicomObject(scnSeriesItem);
ianSOPSeq = ianSeriesItem.get(Tag.ReferencedSOPSequence);
scnSOPSeq = scnSeriesItem.putSequence(Tag.ReferencedImageSequence);
for (int j = 0, m = ianSOPSeq.countItems(); j < m; ++j) {
scnSOPItem = new BasicDicomObject();
ianSOPSeq.getDicomObject(j).exclude(INSTANCE_AVAILABILITY).copyTo(scnSOPItem);
scnSOPSeq.addDicomObject(scnSOPItem);
}
}
return scn;
}
public static TCEncapsulatedDocument create(
TCObject tc, MimeType mimeType, String filename, InputStream in, String description)
throws Exception {
if (mimeType == null || !DOC_TYPES.contains(mimeType.getDocumentType())) {
throw new Exception("Mime-Type is not supported (" + mimeType + ")");
}
TCReferencedInstance ref = createReferencedInstance(tc, UID.EncapsulatedPDFStorage, MODALITY);
DicomObject metaData =
TCDocumentObject.createDicomMetaData(
mimeType,
filename,
description,
ref,
tc.getPatientId(),
tc.getPatientIdIssuer(),
tc.getPatientName(),
MODALITY);
metaData.putString(Tag.TransferSyntaxUID, VR.UI, UID.ExplicitVRLittleEndian);
metaData.putString(
Tag.DocumentTitle,
VR.ST,
description != null && !description.isEmpty() ? description : getFileName(filename));
metaData.putString(Tag.MIMETypeOfEncapsulatedDocument, VR.LO, mimeType.getMimeTypeString());
metaData.putString(Tag.BurnedInAnnotation, VR.CS, "NO"); // $NON-NLS-1$
metaData.putSequence(Tag.ConceptNameCodeSequence, 0);
try {
return new TCEncapsulatedDocument(mimeType, ref, metaData, IOUtils.toByteArray(in));
} finally {
if (in != null) {
in.close();
}
}
}