private void setNorm(
double medDepth,
List<String> bad,
Map<String, Double> factor2,
Map<String, Double> sampleMedian) {
for (Map.Entry<String, Map<String, Sample>> entry : samples.entrySet()) {
if (!bad.contains(entry.getKey())) {
for (Map.Entry<String, Sample> entrySample : entry.getValue().entrySet()) {
Sample sample = entrySample.getValue();
double norm1 = sample.getNorm1();
double fact2 = factor2.get(entry.getKey());
double smplMed = sampleMedian.get(sample.getSample());
sample.setNorm1b(Precision.round(norm1 * fact2 + 0.1, 2));
sample.setNorm2(
Precision.round(
medDepth != 0 ? log.value((norm1 * fact2 + 0.1) / medDepth) / log.value(2) : 0,
2));
sample.setNorm3(
Precision.round(
smplMed != 0 ? log.value((norm1 * fact2 + 0.1) / smplMed) / log.value(2) : 0, 2));
}
}
}
}
private double getMedDepth(double[] depth, Set<String> samp) {
int i = 0;
for (Map.Entry<String, Map<String, Sample>> entry : samples.entrySet()) {
Map<String, Sample> sampleMap = entry.getValue();
for (Map.Entry<String, Sample> sampleEntry : sampleMap.entrySet()) {
Sample sample = sampleEntry.getValue();
double norm1 = Precision.round((sample.getCov() * factor.get(sample.getSample())), 2);
sample.setNorm1(norm1);
depth[i++] = norm1;
samp.add(sample.getSample());
}
}
return median.evaluate(depth);
}
protected void initialize(
double dLatResolution,
double dLonResolution,
Range<Double> rngLat,
Range<Double> rngLon,
String sVarName,
String sVarUnits) {
// i1 = current counter
// d1 = current value being added to map
// iMax = maximum value for counter
int i1;
int iMax;
double d1;
// saving variables
this.sVarName = sVarName;
this.sVarUnits = sVarUnits;
// this.plyMask = plyMask;
this.dLatResolution = dLatResolution;
this.dLonResolution = dLonResolution;
this.rngLat = rngLat;
this.rngLon = rngLon;
// loading treemaps
mapLat = new TreeMap<Double, Integer>();
mapLon = new TreeMap<Double, Integer>();
mapDate = new TreeMap<LocalDate, Integer>();
mapDate.put(NULL_TIME, 0);
mapVert = new TreeMap<Double, Integer>();
mapVert.put(NULL_VERT, 0);
// initializing indices
iDateIndex = 1;
iVertIndex = 1;
iMax = 0;
for (int i = 0;
i < (rngLat.upperEndpoint() - rngLat.lowerEndpoint()) / dLatResolution + 5;
i++) {
d1 = Precision.round(i * dLatResolution + rngLat.lowerEndpoint(), 9);
if (d1 > rngLat.upperEndpoint() - dLatResolution) {
break;
}
iMax++;
}
i1 = 0;
for (int i = 0;
i < (rngLat.upperEndpoint() - rngLat.lowerEndpoint()) / dLatResolution + 5;
i++) {
d1 = Precision.round(i * dLatResolution + rngLat.lowerEndpoint(), 9);
if (d1 > rngLat.upperEndpoint() - dLatResolution) {
break;
}
mapLat.put(d1, iMax - i1 - 1);
i1++;
}
i1 = 0;
for (int i = 0;
i < (rngLon.upperEndpoint() - rngLon.lowerEndpoint()) / dLonResolution + 5;
i++) {
d1 = Precision.round(i * dLonResolution + rngLon.lowerEndpoint(), 9);
if (d1 > rngLon.upperEndpoint() - dLonResolution) {
break;
}
mapLon.put(d1, i1);
i1++;
}
iRows = mapLat.size();
iCols = mapLon.size();
lstCoords = new ArrayList<GeoCoordinate>(10000);
}
@Override
public double calcPay() { // need??
double rounded = Precision.round((salary / 24), 2, BigDecimal.ROUND_HALF_DOWN);
return rounded;
}
/**
* The real and imaginary values of the given Complex are rounded to precision
*
* @param complex
* @param precision
*/
public ComplexValue(Complex complex, int precision) {
real = BigDecimal.valueOf(Precision.round(complex.getReal(), precision));
imaginary = BigDecimal.valueOf(Precision.round(complex.getImaginary(), precision));
}