public static MultiVariatePieceWiseLinearFunction createSenseSleepFunctionVerbose(
ScenarioProperties scenario, List<SensorProperties> sensorProperties) {
NCube domain = createDomain(sensorProperties, scenario);
// max(0, min(x1 + l1, x2 + l2) - max(x1, x2))
MultiVariatePieceWiseLinearFunction zero =
MultiVariatePieceWiseLinearFunctionUtilities.createZeroFunction(domain);
double l = scenario.getScheduleIntervalLength();
StopWatch watch = new StopWatch();
watch.start();
MultiVariatePieceWiseLinearFunction maxStart = createMaxStartFunction(domain);
watch.stop();
System.out.println(
"Created maxStart in "
+ watch.getTime()
+ ". Simplices "
+ maxStart.getPartitioning().getSimplices().size());
watch.reset();
watch.start();
MultiVariatePieceWiseLinearFunction minEnd = createMinEndFunction(domain, sensorProperties);
watch.stop();
System.out.println(
"Created minEnd in "
+ watch.getTime()
+ ". Simplices "
+ minEnd.getPartitioning().getSimplices().size());
watch.reset();
watch.start();
MultiVariatePieceWiseLinearFunction minMinusMax = minEnd.subtract(maxStart);
watch.stop();
System.out.println(
"Created minMinusMax in "
+ watch.getTime()
+ ". Simplices "
+ minMinusMax.getPartitioning().getSimplices().size());
watch.reset();
watch.start();
MultiVariatePieceWiseLinearFunction overlap = minMinusMax.max(zero);
System.out.println(
"Created overlap in "
+ watch.getTime()
+ ". Simplices "
+ overlap.getPartitioning().getSimplices().size());
MultiVariatePieceWiseLinearFunction result = overlap.subtract(l).multiply(-1.0);
System.out.println("Simplices " + result.getPartitioning().getSimplices().size());
return result;
}
@Override
public void run() {
try {
StopWatch stp2 = new StopWatch();
stp2.start();
JSONObject json = new JSONObject();
job.setStatus("running");
if (job.progress() == 100.0) {
finalizeJob(job);
return;
}
Vector<String> ids = new Vector<String>();
Vector<String> original_names = new Vector<String>();
String data = job.getNextDataBatch();
if (data == null || data.equals("")) return;
String[] lines = data.split("\n");
if (job.containsId()) {
for (int i = 0; i < lines.length; i++) {
if (lines[i].trim().equals("")) continue;
ids.add(NameUtil.getNameId(lines[i]));
}
}
for (int i = 0; i < lines.length; i++) {
original_names.add(NameUtil.processName(lines[i], job.containsId()));
}
String names = NameUtil.CleanNames(lines, job);
if (names.equals("")) return;
if (job.getType() == TnrsJob.NAME_MATCH_JOB) {
TaxamatchInterface taxa_match = new TaxamatchInterface(tnrsBaseUrl);
String result = taxa_match.queryTaxamatch(names, job);
json = (JSONObject) JSONSerializer.toJSON(result);
} else if (job.getType() == TnrsJob.PARSING_JOB) {
json = gni_interface.parseNames(names);
}
if (job.outstandingNames() == 0) {
JobHelper.persistJobInfo(baseFolder, job);
}
saveResults(job, json, ids, original_names, "");
job.setStatus("idle");
stp2.stop();
log.info("overall :" + stp2.toString());
} catch (Exception ex) {
log.error(ExceptionUtils.getFullStackTrace(ex));
job.setStatus("failed");
ex.printStackTrace();
}
}
protected void testOutgoingConnection() throws MailException {
StopWatch stopWatch = null;
if (_log.isDebugEnabled()) {
stopWatch = new StopWatch();
stopWatch.start();
}
try {
Transport transport = getTransport();
transport.isConnected();
transport.close();
} catch (Exception e) {
throw new MailException(MailException.ACCOUNT_OUTGOING_CONNECTION_FAILED, e);
} finally {
if (_log.isDebugEnabled()) {
stopWatch.stop();
_log.debug("Testing outgoing connection completed in " + stopWatch.getTime() + " ms");
}
}
}
@GET
@Transactional
@Path("/user/{userName}/accountBalance")
@Produces(MediaType.APPLICATION_JSON)
public Response getAccountBalance(
@PathParam("apiVersion") String apiVersion,
@PathParam("userName") String userName,
@DefaultValue("true") @QueryParam("cache") boolean cache)
throws JsonProcessingException {
StopWatch watch = new StopWatch();
watch.start();
EntityManager em = emf.createEntityManager();
if (log.isDebugEnabled()) {
log.trace("Time to execute getTree Service : {}ms", watch.getTime());
}
// if (!accountValidator.validateAccount(accountId)) {
// return
// Response.status(Response.Status.UNAUTHORIZED).entity(accountValidator.getResponse(accountId)).build();
// }
long accNo = 746353;
// BossUserRepository userRepo = new BossUserRepository();
double accountBalance = userRepo.account(accNo);
watch.stop();
if (log.isDebugEnabled()) {
log.trace("Time to execute ACCOUNTDETAILS for a USER : {}ms", watch.getTime());
}
return Response.status(Response.Status.OK).entity(accountBalance).build();
}
@Test
public void testListCalendarNames() {
initializeCredentials();
FindFolder request = constructFindFolderRequest();
StopWatch stopWatch = new StopWatch();
stopWatch.start();
FindFolderResponse response = ewsClient.findFolder(request);
String captured = capture(response);
log.info("testListCalendarNames response: " + captured);
stopWatch.stop();
log.debug("FindFolder request completed in " + stopWatch);
Assert.assertNotNull(response);
// now generate a Map?
Map<String, String> msolCalendars = new LinkedHashMap<String, String>();
ArrayOfResponseMessagesType responses = response.getResponseMessages();
List<JAXBElement<? extends ResponseMessageType>> responseList =
responses
.getCreateItemResponseMessagesAndDeleteItemResponseMessagesAndGetItemResponseMessages();
// iterate over responses
for (JAXBElement<? extends ResponseMessageType> rm : responseList) {
FindFolderResponseMessageType itemType = (FindFolderResponseMessageType) rm.getValue();
FindFolderParentType rootFolder = itemType.getRootFolder();
ArrayOfFoldersType folders = rootFolder.getFolders();
List<BaseFolderType> folderList = folders.getFoldersAndCalendarFoldersAndContactsFolders();
for (BaseFolderType baseFolder : folderList) {
String displayName = baseFolder.getDisplayName();
String folderId = baseFolder.getFolderId().getId();
String changeKey = baseFolder.getFolderId().getChangeKey();
log.debug(displayName + "(id=" + folderId + " : changeKey=" + changeKey + " )");
}
}
}
@Override
protected Client createClient(Settings.Builder builder) {
StopWatch stopWatch = new StopWatch();
stopWatch.start();
if (_log.isDebugEnabled()) {
_log.debug(
"Starting embedded Elasticsearch cluster " + elasticsearchConfiguration.clusterName());
}
NodeBuilder nodeBuilder = NodeBuilder.nodeBuilder();
nodeBuilder.settings(builder);
_node = nodeBuilder.node();
_node.start();
Client client = _node.client();
if (_log.isDebugEnabled()) {
stopWatch.stop();
_log.debug(
"Finished starting "
+ elasticsearchConfiguration.clusterName()
+ " in "
+ stopWatch.getTime()
+ " ms");
}
return client;
}
/**
* 测试哨兵模式
*
* <p>one master（one sentinel） - one slave
*/
@Test
public void testSentinel() {
// 哨兵初始化
HostAndPort sentinelAddr = new HostAndPort("192.168.1.201", 26379);
Set<String> sentinels = new HashSet<String>();
sentinels.add(sentinelAddr.toString());
JedisSentinelPool sentinelPool =
new JedisSentinelPool("mymaster", sentinels, new GenericObjectPoolConfig());
// 线程初始化
StopWatch stopWatch = new StopWatch();
stopWatch.start();
AtomicInteger calcCount = new AtomicInteger(0);
AtomicInteger failCount = new AtomicInteger(0);
for (int t = 0; t < TIMES; t++) {
ThreadPool threadPool = new ThreadPool(THREADS);
SentinelThread sentinelThread = new SentinelThread(sentinelPool, calcCount, failCount);
threadPool.executeThread(sentinelThread);
try {
TimeUnit.SECONDS.sleep(SECONDS);
} catch (InterruptedException e) {
Thread.currentThread().interrupt();
System.err.println("error !!!");
}
}
sentinelPool.close();
stopWatch.stop();
// 打印结果
System.out.println(
String.format(
"redis sentinel work finish, times:%d(milliseconds), fails:%d",
stopWatch.getTime(), failCount.get()));
}
protected void performWarmUp(SessionFactory sf) {
log("starting warm up phase");
warmupStopWatch.start();
TestContext ctx = new TestContext(this, sf);
scheduleTasksAndStart(ctx, warmupCyclesCount);
warmupStopWatch.stop();
}
private void waitFor(Id id, Pattern pattern) {
if (pattern == null) {
return;
}
final StopWatch watch = new StopWatch();
watch.start();
logger.info(String.format("Waiting for '%s' to appear in output", pattern.toString()));
final Container container;
try {
container = findContainer(id);
} catch (DockerException e) {
throw new OrchestrationException(e);
}
if (container == null) {
logger.warn(String.format("Can not find container %s, not waiting", id));
return;
}
try {
final LogContainerCmd logContainerCmd =
docker
.logContainerCmd(container.getId())
.withStdErr()
.withStdOut()
.withFollowStream()
.withTimestamps();
final InputStream stream = logContainerCmd.exec();
try (final BufferedReader reader = new BufferedReader(new InputStreamReader(stream))) {
String line;
while ((line = reader.readLine()) != null) {
if (pattern.matcher(line).find()) {
watch.stop();
logger.info(String.format("Waited for %s", watch.toString()));
return;
}
}
throw new OrchestrationException("Container log ended before line appeared in output");
}
} catch (Exception e) {
logger.warn(
"Unable to obtain logs from container "
+ container.getId()
+ ", will continue without waiting: ",
e);
}
}
@SyncThread(level = 1000)
private void createVm(
VmInstanceInventory vm, String rootDiskUuid, List<String> nws, List<String> disks)
throws ApiSenderException {
StopWatch watch = new StopWatch();
watch.start();
try {
api.createVmByFullConfig(vm, rootDiskUuid, nws, disks);
} finally {
watch.stop();
timeCost.add(watch.getTime());
latch.countDown();
}
}
/**
* Issues a {@link GetUserAvailabilityRequest} for the configured emailAddress, startDate and
* endDate. Verifies a response, and that the freebusy responses match expectedEventCount.
*/
@Test
public void testGetUserAvailability() {
initializeCredentials();
GetUserAvailabilityRequest request =
constructAvailabilityRequest(
DateHelp.makeDate(startDate), DateHelp.makeDate(endDate), emailAddress);
StopWatch stopWatch = new StopWatch();
stopWatch.start();
GetUserAvailabilityResponse response = ewsClient.getUserAvailability(request);
stopWatch.stop();
log.debug("GetUserAvailability request completed in " + stopWatch);
Assert.assertNotNull(response);
Assert.assertEquals(
expectedEventCount, response.getFreeBusyResponseArray().getFreeBusyResponses().size());
}
@PostConstruct
public void createIndex() {
StopWatch stopWatch = new StopWatch();
stopWatch.start();
try {
getFullTextEntityManager(entityManager) //
.createIndexer(CLASSES_TO_BE_INDEXED) //
.batchSizeToLoadObjects(batchSizeToLoadObjects) //
.threadsToLoadObjects(threadsToLoadObjects) //
.threadsForSubsequentFetching(threadsForSubsequentFetching) //
.start();
} finally {
stopWatch.stop();
log.info("Indexed {} in {}", Arrays.toString(CLASSES_TO_BE_INDEXED), stopWatch.toString());
}
}
/** @param orgIn */
private void publishUpdateErrataCacheEvent(Org orgIn) {
StopWatch sw = new StopWatch();
if (log.isDebugEnabled()) {
log.debug("Updating errata cache");
sw.start();
}
UpdateErrataCacheEvent uece = new UpdateErrataCacheEvent(UpdateErrataCacheEvent.TYPE_ORG);
uece.setOrgId(orgIn.getId());
MessageQueue.publish(uece);
if (log.isDebugEnabled()) {
sw.stop();
log.debug("Finished Updating errata cache. Took [" + sw.getTime() + "]");
}
}
protected void initIndex(SessionFactory sf) {
log("starting initialize index");
initIndexStopWatch.start();
FullTextSession s = Search.getFullTextSession(sf.openSession());
try {
s.createIndexer().startAndWait();
} catch (InterruptedException e) {
throw new RuntimeException(e);
} finally {
s.close();
}
initIndexStopWatch.stop();
}
@Override
protected Client createClient(Settings.Builder builder) {
StopWatch stopWatch = new StopWatch();
stopWatch.start();
if (_log.isWarnEnabled()) {
StringBundler sb = new StringBundler(6);
sb.append("Liferay is configured to use embedded Elasticsearch ");
sb.append("as its search engine. Do NOT use embedded ");
sb.append("Elasticsearch in production. Embedded Elasticsearch ");
sb.append("is useful for development and demonstration purposes. ");
sb.append("Remote Elasticsearch connections can be configured in ");
sb.append("the Control Panel.");
_log.warn(sb);
}
if (_log.isDebugEnabled()) {
_log.debug(
"Starting embedded Elasticsearch cluster " + elasticsearchConfiguration.clusterName());
}
NodeBuilder nodeBuilder = NodeBuilder.nodeBuilder();
nodeBuilder.settings(builder);
_node = nodeBuilder.node();
_node.start();
Client client = _node.client();
if (_log.isDebugEnabled()) {
stopWatch.stop();
_log.debug(
"Finished starting "
+ elasticsearchConfiguration.clusterName()
+ " in "
+ stopWatch.getTime()
+ " ms");
}
return client;
}
/** @param args */
public static void main(String[] args) {
String idxLocation = args[0];
try {
IndexWriter iw =
new IndexWriter(idxLocation, new StandardAnalyzer(), MaxFieldLength.UNLIMITED);
LOG.info("opened index " + idxLocation + " starting optimization...");
StopWatch watch = new StopWatch();
watch.start();
iw.optimize();
iw.close();
watch.stop();
LOG.info("done. took " + watch);
} catch (Exception e) {
e.printStackTrace();
}
}
protected void initDatabase(SessionFactory sf) {
log("starting initialize database");
initDatabaseStopWatch.start();
BatchSupport batchSupport = new BatchSupport(sf, initialOffset);
batchSupport.execute(
"insert into author(id, name) values(?, ?)",
initialAutorCount,
new BatchCallback() {
@Override
public void initStatement(PreparedStatement ps, long id) throws SQLException {
ps.setLong(1, id);
ps.setString(2, "autor" + id);
}
});
batchSupport.execute(
"insert into book(id, title, summary, rating, totalSold, publicationDate) values(?, ?, ?, ?, ?, ?)",
initialBookCount,
new BatchCallback() {
@Override
public void initStatement(PreparedStatement ps, long id) throws SQLException {
ps.setLong(1, id);
ps.setString(2, "title" + id);
ps.setString(3, reverse(SUMMARIES[(int) (id % SUMMARIES.length)]));
ps.setLong(4, -1);
ps.setLong(5, -1);
ps.setDate(6, new Date(PUBLICATION_DATE_ZERO.getTime()));
}
});
batchSupport.execute(
"insert into book_author(book_id, authors_id) values(?, ?)",
initialBookCount,
new BatchCallback() {
@Override
public void initStatement(PreparedStatement ps, long id) throws SQLException {
ps.setLong(1, id);
ps.setLong(2, initialOffset + (id % initialAutorCount));
}
});
initDatabaseStopWatch.stop();
}
/**
* Similar to {@link #testGetUserAvailability()}, but uses {@link FindItem}.
*
* @throws JAXBException
*/
@Test
public void testFindItemCalendarType() throws JAXBException {
initializeCredentials();
FindItem request =
constructFindItemRequest(
DateHelp.makeDate(startDate), DateHelp.makeDate(endDate), emailAddress);
StopWatch stopWatch = new StopWatch();
stopWatch.start();
FindItemResponse response = ewsClient.findItem(request);
stopWatch.stop();
log.debug("FindItem request completed in " + stopWatch);
Assert.assertNotNull(response);
Assert.assertEquals(
expectedEventCount,
response
.getResponseMessages()
.getCreateItemResponseMessagesAndDeleteItemResponseMessagesAndGetItemResponseMessages()
.size());
}
public void testLotsOfLoanRequests() throws Exception {
final MuleClient client = new MuleClient();
Customer c = new Customer("Ross Mason", 1234);
CustomerQuoteRequest[] requests = new CustomerQuoteRequest[3];
requests[0] = new CustomerQuoteRequest(c, 100000, 48);
requests[1] = new CustomerQuoteRequest(c, 1000, 12);
requests[2] = new CustomerQuoteRequest(c, 10, 24);
final StopWatch stopWatch = new StopWatch();
final int numRequests = getNumberOfRequests() + getWarmUpMessages();
int i = 0;
int numberOfThreads = 1;
CountDownLatch latch = new CountDownLatch(numberOfThreads);
ExceptionHolder exceptionHolder = new ExceptionHolder();
try {
for (int x = 0; x < numberOfThreads; x++) {
Thread thread =
new Thread(new ClientReceiver(latch, numRequests / numberOfThreads, exceptionHolder));
thread.start();
}
for (i = 0; i < numRequests; i++) {
if (i == getWarmUpMessages()) {
stopWatch.start();
}
client.dispatch("CustomerRequests", requests[i % 3], null);
}
} finally {
latch.await();
stopWatch.stop();
System.out.println("Total running time was: " + stopWatch.getTime() + "ms");
System.out.println("Requests processed was: " + i);
int mps = (int) (numRequests / ((double) stopWatch.getTime() / (double) 1000));
System.out.println("Msg/sec: " + mps + " (warm up msgs = " + getWarmUpMessages() + ")");
if (exceptionHolder.isExceptionThrown()) {
exceptionHolder.print();
fail("Exceptions thrown during async processing");
}
}
}
public MetadataSegment fetchMetadataOld(String type, String[] levels) throws RetsReplyException {
// Always need system to get version and date
MSystem system = findSystemFromHibernate();
MetadataFinder finder = (MetadataFinder) sMetadataFinders.get(type);
if (finder != null) {
StopWatch stopWatch = new StopWatch();
LOG.debug("Using finder for type: " + type);
stopWatch.start();
List metadata = finder.findMetadata(levels, mSessions);
stopWatch.stop();
LOG.debug("End finder: " + stopWatch.getTime());
return new MetadataSegment(metadata, levels, system.getVersionString(), system.getDate());
} else {
LOG.warn(
"Recieved query for unknown metadataResults type: "
+ type
+ ", level="
+ StringUtils.join(levels, ":"));
throw new RetsReplyException(ReplyCode.INVALID_TYPE, type);
}
}
protected void testIncomingConnection() throws MailException {
StopWatch stopWatch = null;
if (_log.isDebugEnabled()) {
stopWatch = new StopWatch();
stopWatch.start();
}
try {
Store store = getStore(false);
store.close();
} catch (Exception e) {
throw new MailException(MailException.ACCOUNT_INCOMING_CONNECTION_FAILED, e);
} finally {
if (_log.isDebugEnabled()) {
stopWatch.stop();
_log.debug("Testing incoming connection completed in " + stopWatch.getTime() + " ms");
}
}
}
/**
* Creates a new document by document type name. The principal name passed in will be used as the
* document initiator. If the initiatorPrincipalNm is null or blank, the current user will be
* used.
*
* @see org.kuali.rice.krad.service.DocumentService#getNewDocument(String, String)
*/
@Override
public Document getNewDocument(String documentTypeName, String initiatorPrincipalNm)
throws WorkflowException {
// argument validation
String watchName = "DocumentServiceImpl.getNewDocument";
StopWatch watch = new StopWatch();
watch.start();
if (LOG.isDebugEnabled()) {
LOG.debug(watchName + ": started");
}
if (StringUtils.isBlank(documentTypeName)) {
throw new IllegalArgumentException("invalid (blank) documentTypeName");
}
if (GlobalVariables.getUserSession() == null) {
throw new IllegalStateException(
"GlobalVariables must be populated with a valid UserSession before a new document can be created");
}
// get the class for this docTypeName
Class<? extends Document> documentClass = getDocumentClassByTypeName(documentTypeName);
// get the initiator
Person initiator = null;
if (StringUtils.isBlank(initiatorPrincipalNm)) {
initiator = GlobalVariables.getUserSession().getPerson();
} else {
initiator =
KimApiServiceLocator.getPersonService().getPersonByPrincipalName(initiatorPrincipalNm);
if (initiator == null) {
initiator = GlobalVariables.getUserSession().getPerson();
}
}
// get the authorization
DocumentAuthorizer documentAuthorizer =
getDocumentDictionaryService().getDocumentAuthorizer(documentTypeName);
DocumentPresentationController documentPresentationController =
getDocumentDictionaryService().getDocumentPresentationController(documentTypeName);
// make sure this person is authorized to initiate
if (LOG.isDebugEnabled()) {
LOG.debug(
"calling canInitiate from getNewDocument("
+ documentTypeName
+ ","
+ initiatorPrincipalNm
+ ")");
}
if (!documentPresentationController.canInitiate(documentTypeName)
|| !documentAuthorizer.canInitiate(documentTypeName, initiator)) {
throw new DocumentAuthorizationException(
initiator.getPrincipalName(), "initiate", documentTypeName);
}
// initiate new workflow entry, get the workflow doc
WorkflowDocument workflowDocument =
getWorkflowDocumentService().createWorkflowDocument(documentTypeName, initiator);
UserSessionUtils.addWorkflowDocument(GlobalVariables.getUserSession(), workflowDocument);
// create a new document header object
DocumentHeader documentHeader = new DocumentHeader();
documentHeader.setWorkflowDocument(workflowDocument);
documentHeader.setDocumentNumber(workflowDocument.getDocumentId());
// build Document of specified type
Document document = null;
try {
// all maintenance documents have same class
if (MaintenanceDocumentBase.class.isAssignableFrom(documentClass)) {
Class<?>[] defaultConstructor = new Class[] {String.class};
Constructor<? extends Document> cons = documentClass.getConstructor(defaultConstructor);
if (cons == null) {
throw new ConfigurationException(
"Could not find constructor with document type name parameter needed for Maintenance Document Base class");
}
document = cons.newInstance(documentTypeName);
} else {
// non-maintenance document
document = documentClass.newInstance();
}
} catch (IllegalAccessException e) {
throw new RuntimeException("Error instantiating Document", e);
} catch (InstantiationException e) {
throw new RuntimeException("Error instantiating Document", e);
} catch (SecurityException e) {
throw new RuntimeException("Error instantiating Maintenance Document", e);
} catch (NoSuchMethodException e) {
throw new RuntimeException(
"Error instantiating Maintenance Document: No constructor with String parameter found",
e);
} catch (IllegalArgumentException e) {
throw new RuntimeException("Error instantiating Maintenance Document", e);
} catch (InvocationTargetException e) {
throw new RuntimeException("Error instantiating Maintenance Document", e);
}
document.setDocumentHeader(documentHeader);
document.setDocumentNumber(documentHeader.getDocumentNumber());
watch.stop();
if (LOG.isDebugEnabled()) {
LOG.debug(watchName + ": " + watch.toString());
}
return document;
}
@Test
public void testFindCalendarObject() throws JAXBException {
initializeCredentials();
FindItem request =
constructFindItemRequest(
DateHelp.makeDate(startDate), DateHelp.makeDate(endDate), emailAddress);
StopWatch stopWatch = new StopWatch();
stopWatch.start();
FindItemResponse response = ewsClient.findItem(request);
String captured = capture(response);
log.info("testFindCalendarObject response: " + captured);
stopWatch.stop();
log.debug("FindItem request completed in " + stopWatch);
Assert.assertNotNull(response);
Assert.assertEquals(
expectedEventCount,
response
.getResponseMessages()
.getCreateItemResponseMessagesAndDeleteItemResponseMessagesAndGetItemResponseMessages()
.size());
List<JAXBElement<? extends ResponseMessageType>> responseList =
response
.getResponseMessages()
.getCreateItemResponseMessagesAndDeleteItemResponseMessagesAndGetItemResponseMessages();
for (JAXBElement<? extends ResponseMessageType> rm : responseList) {
// Class<? extends ResponseMessageType> rmt = rm.getDeclaredType();
FindItemResponseMessageType itemType = (FindItemResponseMessageType) rm.getValue();
FindItemParentType rootFolder = itemType.getRootFolder();
ArrayOfRealItemsType itemArray = rootFolder.getItems();
List<ItemType> items = itemArray.getItemsAndMessagesAndCalendarItems();
// ArrayOfRealItemsType itemArray = itemType.getItems();
Integer itemCount = new Integer(items.size());
Integer currentItemNum = new Integer(1);
for (ItemType item : items) {
CalendarItemType calItem = (CalendarItemType) item;
StringBuilder sb = new StringBuilder();
sb.append("\n ");
sb.append("ItemId: " + calItem.getItemId().toString() + "\n ");
sb.append("ParentFolderId: " + calItem.getParentFolderId().toString() + "\n ");
sb.append("ItemClass: " + calItem.getItemClass().toString() + "\n ");
sb.append("Subject: " + calItem.getSubject().toString() + "\n ");
sb.append("Sensitivity: " + calItem.getSensitivity().toString() + "\n ");
sb.append("DateTimeReceived: " + calItem.getDateTimeReceived().toString() + "\n ");
sb.append("Size: " + calItem.getSize().toString() + "\n ");
sb.append("Importance: " + calItem.getImportance().toString() + "\n ");
sb.append("IsSubmitted: " + calItem.isIsSubmitted().toString() + "\n ");
sb.append("IsDraft: " + calItem.isIsDraft().toString() + "\n ");
sb.append("IsFromMe: " + calItem.isIsFromMe().toString() + "\n ");
sb.append("IsResend: " + calItem.isIsResend().toString() + "\n ");
sb.append("IsUnmodified: " + calItem.isIsUnmodified().toString() + "\n ");
sb.append("DateTimeSent: " + calItem.getDateTimeSent().toString() + "\n ");
sb.append("DateTimeCreated: " + calItem.getDateTimeCreated().toString() + "\n ");
sb.append("ReminderDueBy: " + calItem.getReminderDueBy().toString() + "\n ");
sb.append("ReminderIsSet: " + calItem.isReminderIsSet().toString() + "\n ");
sb.append(
"ReminderMinutesBeforeStart: "
+ calItem.getReminderMinutesBeforeStart().toString()
+ "\n ");
sb.append("DisplayCc: " + calItem.getDisplayCc().toString() + "\n ");
sb.append("DisplayTo: " + calItem.getDisplayTo().toString() + "\n ");
sb.append("HasAttachments: " + calItem.isHasAttachments().toString() + "\n ");
sb.append("Culture: " + calItem.getCulture().toString() + "\n ");
if (calItem.getEffectiveRights() != null) {
sb.append(
"EffectiveRights.isCreateAssociated: "
+ (calItem.getEffectiveRights() == null
? "false"
: new Boolean(calItem.getEffectiveRights().isCreateAssociated()).toString())
+ "\n ");
sb.append(
"EffectiveRights.isCreateContents: "
+ new Boolean(calItem.getEffectiveRights().isCreateContents()).toString()
+ "\n ");
sb.append(
"EffectiveRights.isCreateHierarchy: "
+ new Boolean(calItem.getEffectiveRights().isCreateHierarchy()).toString()
+ "\n ");
sb.append(
"EffectiveRights.isDelete: "
+ new Boolean(calItem.getEffectiveRights().isDelete()).toString()
+ "\n ");
sb.append(
"EffectiveRights.isModify: "
+ new Boolean(calItem.getEffectiveRights().isModify()).toString()
+ "\n ");
}
// sb.append("LastModifiedName: "+calItem.getLastModifiedName().toString()+"\n ");
// sb.append("LastModifiedTime: "+calItem.getLastModifiedTime().toString()+"\n ");
// sb.append("IsAssociated: "+calItem.isIsAssociated().toString()+"\n ");
// sb.append("WebClientReadFormQueryString:
// "+calItem.getWebClientReadFormQueryString().toString()+"\n ");
/// sb.append("WebClientEditFormQueryString:
// "+calItem.getWebClientEditFormQueryString().toString()+"\n ");
// sb.append("UID: "+calItem.getUID().toString()+"\n ");
// sb.append("DateTimeStamp: "+calItem.getDateTimeStamp().toString()+"\n ");
sb.append("Start: " + calItem.getStart().toString() + "\n ");
sb.append("End: " + calItem.getEnd().toString() + "\n ");
sb.append("IsAllDayEvent: " + calItem.isIsAllDayEvent().toString() + "\n ");
sb.append(
"LegacyFreeBusyStatus: " + calItem.getLegacyFreeBusyStatus().toString() + "\n ");
if (null != calItem.getLocation())
sb.append("Location: " + calItem.getLocation().toString() + "\n ");
sb.append("IsMeeting: " + calItem.isIsMeeting().toString() + "\n ");
sb.append("IsCancelled: " + calItem.isIsCancelled().toString() + "\n ");
sb.append("IsRecurring: " + calItem.isIsRecurring().toString() + "\n ");
// sb.append("MeetingRequestWasSent: "+calItem.getMeetingRequestWasSent().toString()+"\n
// ");
sb.append("IsResponseRequested: " + calItem.isIsResponseRequested().toString() + "\n ");
sb.append("CalendarItemType: " + calItem.getCalendarItemType().toString() + "\n ");
sb.append("MyResponseType: " + calItem.getMyResponseType().toString() + "\n ");
sb.append("OrganizerName: " + calItem.getOrganizer().getMailbox().getName() + "\n ");
sb.append(
"OrganizerName: " + calItem.getOrganizer().getMailbox().getMailboxType() + "\n ");
sb.append("Duration: " + calItem.getDuration().toString() + "\n ");
sb.append("TimeZone: " + calItem.getTimeZone().toString() + "\n ");
sb.append(
"AppointmentSequenceNumber: "
+ calItem.getAppointmentSequenceNumber().toString()
+ "\n ");
sb.append("AppointmentState: " + calItem.getAppointmentState().toString() + "\n ");
// log.debug("FoundCalendarItem ("+currentItemNum.toString()+" of
// "+itemCount.toString()+"):" + sb.toString());
currentItemNum++;
}
// ItemType item = itemArray.getItemsAndMessagesAndCalendarItems().get(0);
// Fields[] fields = rmt.getFields();
}
}
@Override
public void drive() {
// A Consumer is not thread-safe
// {@see
// http://kafka.apache.org/090/javadoc/org/apache/kafka/clients/consumer/KafkaConsumer.html}
// {@see
// http://kafka.apache.org/090/javadoc/org/apache/kafka/clients/consumer/KafkaConsumer.html#multithreaded}
try (KafkaConsumer<byte[], byte[]> consumer =
new KafkaConsumer<>(consumerDefinition.getKafkaConfig())) {
String topic = consumerDefinition.getTopic();
log.info("Subscribing to {}", topic);
if (consumerRebalanceListener == null) {
consumer.subscribe(Collections.singletonList(topic));
} else {
consumer.subscribe(Collections.singletonList(topic), consumerRebalanceListener);
}
long messagesToReceive = consumerDefinition.getMessagesToReceive();
log.info("Expecting {} messages", messagesToReceive);
StopWatch stopWatch = new StopWatch();
stopWatch.start();
do {
ConsumerRecords<byte[], byte[]> records =
consumer.poll(consumerDefinition.getPollTimeout());
if (records == null) {
throw new IllegalStateException("null ConsumerRecords polled");
} else {
if (records.count() == 0) {
try {
log.info("No records fetched, pausing");
Thread.sleep(1000);
} catch (InterruptedException e) {
throw new RuntimeException(e);
}
} else {
if (log.isTraceEnabled()) {
log.trace("Fetched {} records", records.count());
}
for (ConsumerRecord<byte[], byte[]> record : records) {
recordsFetched += 1;
applyReceiveDelay();
if (recordsFetched % consumerDefinition.getReportReceivedEvery() == 0) {
log.info("Received {} messages", recordsFetched);
}
}
}
}
if (isShutdownRequested()) {
break;
}
stopWatch.split();
} while ((recordsFetched < messagesToReceive)
&& (stopWatch.getSplitTime() < consumerDefinition.getTestRunTimeout()));
stopWatch.stop();
if (isShutdownRequested()) {
log.info("Shutting down");
} else {
long runTime = stopWatch.getTime();
log.info("Done. Consumer received {} msgs in {} ms", messagesToReceive, runTime);
double averageThroughput = (1000d / runTime) * messagesToReceive;
log.info("Average throughput: {} msg/s", averageThroughput);
}
} finally {
log.debug("Consumer closed");
if (completionLatch != null) {
completionLatch.countDown();
}
}
}
@Test
public void testPutQueryDelete() throws ExecutionException, InterruptedException {
int numItems = 1;
String x;
EntityManagerSimpleJPA em = (EntityManagerSimpleJPA) factory.createEntityManager();
PerformanceTestObject o = new PerformanceTestObject();
o.setS1("first to create domain");
em.persist(o);
StopWatch stopWatch = new StopWatch();
String s1a = "attribute1";
String s2a = "attribute2";
Future<PerformanceTestObject> lastFuture = null;
stopWatch.start();
for (int i = 0; i < numItems; i++) {
o = new PerformanceTestObject();
o.setS1(s1a);
o.setS2(s2a);
lastFuture = em.persistAsync(o);
}
lastFuture.get(); // not 100% accurate, but good enough
stopWatch.stop();
System.out.println(
"puts duration="
+ stopWatch.getTime()
+ ", "
+ em.getTotalOpStats().getPuts()
+ " items put.");
Thread.sleep(5000);
stopWatch.reset();
stopWatch.start();
Query query = em.createQuery("select o from PerformanceTestObject o");
List<PerformanceTestObject> resultList = query.getResultList();
System.out.println("iterating result list...");
int i = 0;
for (PerformanceTestObject performanceTestObject : resultList) {
i++;
if (i % 100 == 0) {
System.out.println(i);
}
}
stopWatch.stop();
System.out.println(
"query ALL duration="
+ stopWatch.getTime()
+ ", "
+ em.getTotalOpStats().getGets()
+ " items got.");
stopWatch.reset();
stopWatch.start();
System.out.println("Deleting ALL...");
for (PerformanceTestObject performanceTestObject : resultList) {
lastFuture = em.removeAsync(o);
}
lastFuture.get();
stopWatch.stop();
System.out.println(
"delete duration=" + stopWatch.getTime() + ", " + resultList.size() + " items deleted.");
System.out.println("sleeping...");
Thread.sleep(30000);
em.close();
}
@Override
public Observable<Void> stop() {
stopWatch.stop();
stopWatchState = STATE_STOPPED;
return Observable.just(null);
}
/** @see DataSetEvaluator#evaluate(DataSetDefinition, EvaluationContext) */
@SuppressWarnings("unchecked")
public DataSet evaluate(DataSetDefinition dataSetDefinition, EvaluationContext context)
throws EvaluationException {
PatientDataSetDefinition dsd = (PatientDataSetDefinition) dataSetDefinition;
context = ObjectUtil.nvl(context, new EvaluationContext());
SimpleDataSet dataSet = new SimpleDataSet(dsd, context);
dataSet.setSortCriteria(dsd.getSortCriteria());
// Construct a new EvaluationContext based on the passed filters
Cohort c = context.getBaseCohort();
if (dsd.getRowFilters() != null) {
for (Mapped<? extends CohortDefinition> q : dsd.getRowFilters()) {
Cohort s = Context.getService(CohortDefinitionService.class).evaluate(q, context);
c = CohortUtil.intersectNonNull(c, s);
}
}
if (c == null) {
c =
Context.getService(CohortDefinitionService.class)
.evaluate(new AllPatientsCohortDefinition(), context);
}
EvaluationContext ec = context.shallowCopy();
if (!CohortUtil.areEqual(ec.getBaseCohort(), c)) {
ec.setBaseCohort(c);
}
// Evaluate each specified ColumnDefinition for all of the included rows and add these to the
// dataset
for (RowPerObjectColumnDefinition cd : dsd.getColumnDefinitions()) {
if (log.isDebugEnabled()) {
log.debug("Evaluating column: " + cd.getName());
log.debug(
"With Data Definition: "
+ DefinitionUtil.format(cd.getDataDefinition().getParameterizable()));
log.debug("With Mappings: " + cd.getDataDefinition().getParameterMappings());
log.debug("With Parameters: " + ec.getParameterValues());
}
StopWatch sw = new StopWatch();
sw.start();
MappedData<? extends PatientDataDefinition> dataDef =
(MappedData<? extends PatientDataDefinition>) cd.getDataDefinition();
EvaluatedPatientData data =
Context.getService(PatientDataService.class).evaluate(dataDef, ec);
for (Integer id : c.getMemberIds()) {
for (DataSetColumn column : cd.getDataSetColumns()) {
Object val = data.getData().get(id);
val = DataUtil.convertData(val, dataDef.getConverters());
dataSet.addColumnValue(id, column, val);
}
}
sw.stop();
if (log.isDebugEnabled()) {
log.debug("Evaluated column. Duration: " + sw.toString());
}
}
return dataSet;
}
public void resolveNames(Long batchSize) {
StopWatch watchForEntireRun = new StopWatch();
watchForEntireRun.start();
StopWatch watchForBatch = new StopWatch();
watchForBatch.start();
Long count = 0L;
Index<Node> studyIndex = graphService.index().forNodes("studies");
IndexHits<Node> studies = studyIndex.query("title", "*");
for (Node studyNode : studies) {
final Study study1 = new Study(studyNode);
final Iterable<Relationship> specimens = study1.getSpecimens();
for (Relationship collected : specimens) {
Specimen specimen = new Specimen(collected.getEndNode());
final Relationship classifiedAs =
specimen
.getUnderlyingNode()
.getSingleRelationship(RelTypes.CLASSIFIED_AS, Direction.OUTGOING);
if (classifiedAs == null) {
final Relationship describedAs =
specimen
.getUnderlyingNode()
.getSingleRelationship(RelTypes.ORIGINALLY_DESCRIBED_AS, Direction.OUTGOING);
final TaxonNode describedAsTaxon = new TaxonNode(describedAs.getEndNode());
try {
if (taxonFilter.shouldInclude(describedAsTaxon)) {
TaxonNode resolvedTaxon = taxonIndex.getOrCreateTaxon(describedAsTaxon);
if (resolvedTaxon != null) {
specimen.classifyAs(resolvedTaxon);
}
}
} catch (NodeFactoryException e) {
LOG.warn(
"failed to create taxon with name ["
+ describedAsTaxon.getName()
+ "] and id ["
+ describedAsTaxon.getExternalId()
+ "]",
e);
} finally {
count++;
if (count % batchSize == 0) {
watchForBatch.stop();
final long duration = watchForBatch.getTime();
if (duration > 0) {
LOG.info(
"resolved batch of ["
+ batchSize
+ "] names in "
+ getProgressMsg(batchSize, duration));
}
watchForBatch.reset();
watchForBatch.start();
}
}
}
}
}
studies.close();
watchForEntireRun.stop();
LOG.info(
"resolved [" + count + "] names in " + getProgressMsg(count, watchForEntireRun.getTime()));
}
