@Override
public void visit(PostSynapticSite synapticSite) {
if (pass != 0) return;
RealPoint displayPosition = new RealPoint(3);
viewerTransform.apply(synapticSite.getPosition(), displayPosition);
setAlpha(displayPosition.getDoublePosition(2));
final int radius = 10;
if (synapticSite == controller.getSelectedAnnotation())
g2d.setPaint(postSynapticSiteColor.brighter().brighter());
else g2d.setPaint(postSynapticSiteColor);
g2d.setStroke(new BasicStroke(2.0f));
g2d.fillOval(
Math.round(displayPosition.getFloatPosition(0) - radius),
Math.round(displayPosition.getFloatPosition(1) - radius),
2 * radius + 1,
2 * radius + 1);
g2d.setPaint(postSynapticSiteColor.darker());
g2d.drawOval(
Math.round(displayPosition.getFloatPosition(0) - radius),
Math.round(displayPosition.getFloatPosition(1) - radius),
2 * radius + 1,
2 * radius + 1);
}
@Override
public void visit(Synapse s) {
RealPoint displayPosition = new RealPoint(3);
viewerTransform.apply(s.getPosition(), displayPosition);
double sx = displayPosition.getDoublePosition(0);
double sy = displayPosition.getDoublePosition(1);
double sz = displayPosition.getDoublePosition(2);
setAlpha(sz);
if (pass == 1) {
final int radius = 10;
if (s == controller.getSelectedAnnotation())
g2d.setPaint(synapseColor.brighter().brighter());
else g2d.setPaint(synapseColor);
g2d.setStroke(new BasicStroke(2.0f));
g2d.fillOval(
(int) Math.round(sx - radius),
(int) Math.round(sy - radius),
2 * radius + 1,
2 * radius + 1);
g2d.setPaint(synapseColor.darker());
g2d.drawOval(
(int) Math.round(sx - radius),
(int) Math.round(sy - radius),
2 * radius + 1,
2 * radius + 1);
}
}
protected void updateDs() {
d0.setPosition(a.m00, 0);
d0.setPosition(a.m10, 1);
d1.setPosition(a.m01, 0);
d1.setPosition(a.m11, 1);
}
@Override
public void visit(Annotation a) {
if (pass != 2) return;
RealPoint displayPosition = new RealPoint(3);
viewerTransform.apply(a.getPosition(), displayPosition);
double x = displayPosition.getDoublePosition(0);
double y = displayPosition.getDoublePosition(1);
double z = displayPosition.getDoublePosition(2);
g2d.setPaint(Color.white);
setAlpha(z);
g2d.drawString(a.getComment(), (int) x, (int) y);
}
@Override
public void visit(PreSynapticSite synapticSite) {
RealPoint displayPosition = new RealPoint(3);
viewerTransform.apply(synapticSite.getPosition(), displayPosition);
setAlpha(displayPosition.getDoublePosition(2));
final int radius = 10;
if (synapticSite == controller.getSelectedAnnotation())
g2d.setPaint(preSynapticSiteColor.brighter().brighter());
else g2d.setPaint(preSynapticSiteColor);
g2d.setStroke(new BasicStroke(2.0f));
g2d.fillOval(
(int) Math.round(displayPosition.getDoublePosition(0) - radius),
(int) Math.round(displayPosition.getDoublePosition(1) - radius),
2 * radius + 1,
2 * radius + 1);
g2d.setPaint(preSynapticSiteColor.darker());
g2d.drawOval(
(int) Math.round(displayPosition.getDoublePosition(0) - radius),
(int) Math.round(displayPosition.getDoublePosition(1) - radius),
2 * radius + 1,
2 * radius + 1);
if (synapticSite.getPartner() != null) {
RealPoint siteDisplayPosition = new RealPoint(3);
viewerTransform.apply(synapticSite.getPartner().getPosition(), siteDisplayPosition);
double px = siteDisplayPosition.getDoublePosition(0);
double py = siteDisplayPosition.getDoublePosition(1);
drawArrow(
g2d,
displayPosition.getDoublePosition(0),
displayPosition.getDoublePosition(1),
px,
py,
pass);
}
}