/**
* Get the full, heirarchical name of the dataset, which has all parent collection names.
*
* @return full, heirarchical name of the dataset, which has all parent collection names.
*/
public String getFullName() {
return (parent == null)
? name
: (parent.getFullName() == null || parent.getFullName().length() == 0)
? name
: parent.getFullName() + "/" + name;
}
public void init() throws ServletException {
super.init();
// allow = ThreddsConfig.getBoolean("NetcdfSubsetService.allow", true);
// String radarLevel2Dir = ThreddsConfig.get("NetcdfSubsetService.radarLevel2DataDir",
// "/data/ldm/pub/native/radar/level2/");
// if (!allow) return;
contentPath = ServletUtil.getContentPath();
rm = new RadarMethods(contentPath, logServerStartup);
// read in radarCollections.xml catalog
InvCatalogFactory factory = InvCatalogFactory.getDefaultFactory(false); // no validation
cat = readCatalog(factory, getPath() + catName, contentPath + getPath() + catName);
if (cat == null) {
logServerStartup.info("cat initialization failed");
return;
}
// URI tmpURI = cat.getBaseURI();
cat.setBaseURI(catURI);
// get path and location from cat
List parents = cat.getDatasets();
for (int i = 0; i < parents.size(); i++) {
InvDataset top = (InvDataset) parents.get(i);
datasets = top.getDatasets(); // dataset scans
for (int j = 0; j < datasets.size(); j++) {
InvDatasetScan ds = (InvDatasetScan) datasets.get(j);
if (ds.getPath() != null) {
dataLocation.put(ds.getPath(), ds.getScanLocation());
logServerStartup.info("path =" + ds.getPath() + " location =" + ds.getScanLocation());
}
ds.setXlinkHref(ds.getPath() + "/dataset.xml");
}
}
logServerStartup.info(getClass().getName() + " initialization complete ");
} // end init
/**
* Getting invDataset list for a single radar station.
*
* @param stnName radar station name
* @param start of the time
* @param end of the time
* @return list of invDataset
* @throws IOException java io exception
*/
private DqcRadarDatasetInfo queryRadarStation(String stnName, Date start, Date end)
throws IOException {
// http://motherlode.ucar.edu:9080/thredds/idd/radarLevel2?returns=catalog&stn=KFTG&dtime=latest
StringBuffer queryb = new StringBuffer();
queryb.append(dqc.getQuery().getUriResolved().toString());
queryb.append("serviceType=OPENDAP");
queryb.append("&stn=" + stnName);
if ((start == null) && (end == null)) {
queryb.append("&dtime=all");
} else {
String stime = DateUtil.getTimeAsISO8601(start);
String etime = DateUtil.getTimeAsISO8601(end);
queryb.append("&dateStart=" + stime);
queryb.append("&dateEnd=" + etime);
}
URI catalogURI;
try {
catalogURI = new URI(queryb.toString());
} catch (java.net.URISyntaxException e) {
throw new IOException("** MalformedURLException on URL <" + ">\n" + e.getMessage() + "\n");
}
InvCatalogFactory factory = new InvCatalogFactory("default", false);
InvCatalogImpl catalog = (InvCatalogImpl) factory.readXML(catalogURI);
StringBuilder buff = new StringBuilder();
if (!catalog.check(buff)) {
throw new IOException("Invalid catalog <" + catalogURI + ">\n" + buff.toString());
}
List datasets = catalog.getDatasets();
InvDataset idata = (InvDataset) datasets.get(0);
// List ddate = idata.getDates();
ArrayList dsets = (ArrayList) idata.getDatasets();
ArrayList absTimeList = new ArrayList();
ArrayList dURIList = new ArrayList();
ArrayList dInvList = new ArrayList();
for (int i = 0; i < dsets.size(); i++) {
InvDataset tdata = (InvDataset) dsets.get(i);
List acess = tdata.getAccess();
List dates = tdata.getDates();
InvAccess ia = (InvAccess) acess.get(0);
URI d = ia.getStandardUri();
Date date = DateUnit.getStandardOrISO(dates.get(0).toString());
absTimeList.add(date);
dURIList.add(new DatasetURIInfo(d, date));
dInvList.add(new InvDatasetInfo(tdata, date));
}
DqcRadarDatasetInfo dri = new DqcRadarDatasetInfo(absTimeList, dURIList, dInvList);
return dri;
}
/**
* Getting URI for a single radar station.
*
* @param stnName radar station name
* @param absTime is absolute time
* @return URI
* @throws IOException java io exception
*/
public URI getRadarDatasetURI(String stnName, Date absTime) throws IOException {
// absTime is a member of datasetsDateURI
InvDataset invdata = queryRadarStation(stnName, absTime);
List<InvAccess> acess = invdata.getAccess();
InvAccess ia = (InvAccess) acess.get(0);
URI ui = ia.getStandardUri();
if (ui == null) {
throw new IOException("Invalid time selected: " + absTime.toString() + "\n");
}
return ui;
}
/**
* Getting URI for a single radar station.
*
* @param stnName radar station name
* @param productID _more_
* @param absTime is absolute time
* @return InvDataset
* @throws IOException java io exception
*/
private InvDataset queryRadarStation(String stnName, String productID, Date absTime)
throws IOException {
String stime = DateUtil.getTimeAsISO8601(absTime).replaceAll("GMT", "");
// construct a query like this:
// http://motherlode.ucar.edu:9080/thredds/idd/radarLevel2?returns=catalog&stn=KFTG&dtime=latest
StringBuilder queryb = new StringBuilder();
String baseURI = dsc_location.replaceFirst("/dataset.xml", "?");
queryb.append(baseURI);
queryb.append("&stn=" + stnName);
if (productID != null) {
queryb.append("&var=" + productID);
}
if (absTime == null) {
queryb.append("&time=present");
} else {
queryb.append("&time=" + stime);
}
URI catalogURI;
try {
catalogURI = new URI(queryb.toString());
} catch (java.net.URISyntaxException e) {
throw new IOException("** MalformedURLException on URL <" + ">\n" + e.getMessage() + "\n");
}
InvCatalogFactory factory = new InvCatalogFactory("default", false);
// visad.util.Trace.call1("TDSRadarDatasetCollection.readXML");
InvCatalogImpl catalog = (InvCatalogImpl) factory.readXML(catalogURI);
// visad.util.Trace.call2("TDSRadarDatasetCollection.readXML");
// visad.util.Trace.call1("TDSRadarDatasetCollection.checkCatalog");
StringBuilder buff = new StringBuilder();
if (!catalog.check(buff)) {
throw new IOException("Invalid catalog <" + catalogURI + ">\n" + buff.toString());
}
// visad.util.Trace.call2("TDSRadarDatasetCollection.checkCatalog");
// catalog.writeXML(System.out); // debugg
List<InvDataset> datasets = catalog.getDatasets();
InvDataset idata = (InvDataset) datasets.get(0);
List<InvDataset> dsets = idata.getDatasets();
InvDataset tdata = (InvDataset) dsets.get(0);
return tdata;
}
/**
* Return the resource control value which indicates that only users with proper permission can
* access this resource.
*
* <p>??? Not sure if the value indicates anything or just set or not set.
*
* @return the resource control value for this dataset (inherited from ancestor datasets).
*/
public String getRestrictAccess() {
if (restrictAccess != null) return restrictAccess;
// not found, look in parent
if (parent != null) return parent.getRestrictAccess();
return null;
}
/**
* tds radar dataset collection factory
*
* @param ds _more_
* @param dsc_location _more_
* @param errlog _more_
* @return any foctory
* @throws IOException _more_
* @throws java.net.URISyntaxException _more_
*/
public static TDSRadarDatasetCollection factory(
InvDataset ds, String dsc_location, StringBuffer errlog)
throws IOException, java.net.URISyntaxException {
// URI catalogURI = new URI(dsc_location);
// this.docURI = catalogURI;
return factory(ds.getDocumentation("summary"), dsc_location, errlog);
}
/**
* Find the named service declared in this dataset or one of its parents.
*
* @param name match this name
* @return first service that matches the given name, or null if none found.
*/
public InvService findService(String name) {
if (name == null) return null;
// search local (but expanded) services
for (InvService p : services) {
if (p.getName().equals(name)) return p;
}
// not found, look in parent
if (parent != null) return parent.findService(name);
return (catalog == null) ? null : catalog.findService(name);
}
/**
* _more_
*
* @param stnName _more_
* @param productID _more_
* @param absTime _more_
* @return _more_
* @throws IOException _more_
*/
public URI getRadarDatasetURI(String stnName, String productID, Date absTime) throws IOException {
// absTime is a member of datasetsDateURI
if (productID == null) {
return getRadarDatasetURI(stnName, absTime);
}
InvDataset invdata = queryRadarStation(stnName, productID, absTime);
/* List dsets = idata.getDatasets();
int siz = dsets.size();
if(siz != 1)
return null;
InvDataset invdata = (InvDataset)dsets.get(0); */
List acess = invdata.getAccess();
InvAccess ia = (InvAccess) acess.get(0);
URI ui = ia.getStandardUri();
if (ui == null) {
throw new IOException("Invalid time selected: " + absTime.toString() + "\n");
}
return ui;
}
/**
* Getting URI for a single radar station.
*
* @param stnName radar station name
* @param absTime is absolute time
* @return InvDataset
* @throws IOException java io exception
*/
private InvDataset queryRadarStation(String stnName, Date absTime) throws IOException {
String stime = DateUtil.getTimeAsISO8601(absTime);
// construct a query like this:
// http://motherlode.ucar.edu:9080/thredds/idd/radarLevel2?returns=catalog&stn=KFTG&dtime=latest
StringBuffer queryb = new StringBuffer();
queryb.append(dqc.getQuery().getUriResolved().toString());
queryb.append("serviceType=OPENDAP");
queryb.append("&stn=" + stnName);
queryb.append("&dtime=" + stime);
URI catalogURI;
try {
catalogURI = new URI(queryb.toString());
} catch (java.net.URISyntaxException e) {
throw new IOException("** MalformedURLException on URL <" + ">\n" + e.getMessage() + "\n");
}
InvCatalogFactory factory = new InvCatalogFactory("default", false);
InvCatalogImpl catalog = (InvCatalogImpl) factory.readXML(catalogURI);
StringBuilder buff = new StringBuilder();
if (!catalog.check(buff)) {
throw new IOException("Invalid catalog <" + catalogURI + ">\n" + buff.toString());
}
List datasets = catalog.getDatasets();
InvDataset idata = (InvDataset) datasets.get(0);
ArrayList dsets = (ArrayList) idata.getDatasets();
InvDataset tdata = (InvDataset) dsets.get(0);
return tdata;
}
/**
* Getting invDataset list for a single radar station.
*
* @param stnName radar station name
* @param productID _more_
* @param start of the time
* @param end of the time
* @return list of invDataset
* @throws IOException java io exception
*/
private TDSRadarDatasetInfo queryRadarStation(
String stnName, String productID, Date start, Date end) throws IOException {
// http://motherlode.ucar.edu:9080/thredds/idd/radarLevel2?returns=catalog&stn=KFTG&dtime=latest
StringBuilder queryb = new StringBuilder();
String baseURI = dsc_location.replaceFirst("/dataset.xml", "?");
queryb.append(baseURI);
queryb.append("stn=" + stnName);
if (productID != null) {
queryb.append("&var=" + productID);
}
if ((start == null) && (end == null)) {
queryb.append("&time=present");
} else if (end == null) {
String stime = DateUtil.getTimeAsISO8601(start).replaceAll("GMT", "");
queryb.append("&time_start=" + stime);
queryb.append("&time_end=present");
} else {
String stime = DateUtil.getTimeAsISO8601(start).replaceAll("GMT", "");
String etime = DateUtil.getTimeAsISO8601(end).replaceAll("GMT", "");
queryb.append("&time_start=" + stime);
queryb.append("&time_end=" + etime);
}
URI catalogURI;
try {
catalogURI = new URI(queryb.toString());
} catch (java.net.URISyntaxException e) {
throw new IOException("** MalformedURLException on URL <" + ">\n" + e.getMessage() + "\n");
}
InvCatalogFactory factory = new InvCatalogFactory("default", false);
// visad.util.Trace.call1("TDSRadarDatasetCollection.readXML");
InvCatalogImpl catalog = (InvCatalogImpl) factory.readXML(catalogURI);
// visad.util.Trace.call2("TDSRadarDatasetCollection.readXML");
StringBuilder buff = new StringBuilder();
// visad.util.Trace.call1("TDSRadarDatasetCollection.checkCatalog");
if (!catalog.check(buff)) {
throw new IOException("Invalid catalog <" + catalogURI + ">\n" + buff.toString());
}
// visad.util.Trace.call2("TDSRadarDatasetCollection.checkCatalog");
List<InvDataset> datasets = catalog.getDatasets();
InvDataset idata = (InvDataset) datasets.get(0);
List<InvDataset> dsets = idata.getDatasets();
List<Date> absTimeList = new ArrayList<Date>();
List<DatasetURIInfo> dURIList = new ArrayList<DatasetURIInfo>();
List<InvDatasetInfo> dInvList = new ArrayList<InvDatasetInfo>();
// visad.util.Trace.call1("TDSRadarDatasetCollection.getLists");
for (InvDataset tdata : dsets) {
List<InvAccess> acess = tdata.getAccess();
List<DateType> dates = tdata.getDates();
InvAccess ia = (InvAccess) acess.get(0);
URI d = ia.getStandardUri();
Date date = ((DateType) dates.get(0)).getDate();
absTimeList.add(date);
dURIList.add(new DatasetURIInfo(d, date));
dInvList.add(new InvDatasetInfo(tdata, date));
}
// visad.util.Trace.call2("TDSRadarDatasetCollection.getLists");
TDSRadarDatasetInfo dri = new TDSRadarDatasetInfo(absTimeList, dURIList, dInvList);
return dri;
}
/**
* _more_
*
* @param ds _more_
* @param dqc_location _more_
* @param errlog _more_
* @return _more_
* @throws IOException _more_
*/
public static DqcRadarDatasetCollection factory(
InvDataset ds, String dqc_location, StringBuffer errlog) throws IOException {
return factory(ds.getDocumentation("summary"), dqc_location, errlog);
}
/**
* Get containing catalog.
*
* @return containing catalog.
*/
public InvCatalog getParentCatalog() {
if (catalog != null) return catalog;
return (parent != null) ? parent.getParentCatalog() : null;
}
/**
* Find an immediate child dataset by its name.
*
* @param name match on this name
* @return dataset if found or null if not exist.
*/
public InvDatasetImpl findDatasetByName(String name) {
for (InvDataset ds : getDatasets()) {
if (ds.getName().equals(name)) return (InvDatasetImpl) ds;
}
return null;
}