@Override
protected void setChart() {
SeriesManager<Double, Double> sf = new SeriesManager<Double, Double>(intermediateData);
List<DataSeries<Double, Double>> seriesList = sf.getSeries();
DataSeries<Double, Double> series = seriesList.get(0);
List<SeriesPair<Double, Double>> values = series.getSeriesValues(Double.class, Double.class);
XYSeries deltaMassSeries = new XYSeries(series.getIdentifier());
for (SeriesPair<Double, Double> value : values) {
deltaMassSeries.add(value.getX(), value.getY());
}
XYSeriesCollection dataset = new XYSeriesCollection();
dataset.addSeries(deltaMassSeries);
chart =
ChartFactory.createXYLineChart(
getChartTitle(), // chart title
"Experimental m/z - Theoretical m/z", // x axis label
"Relative Frequency", // y axis label
dataset, // chartData
PlotOrientation.VERTICAL,
false, // include legend
true, // tooltips
false // urls
);
chart.addSubtitle(new TextTitle(getChartSubTitle()));
XYPlot plot = chart.getXYPlot();
plot.setDomainZeroBaselineVisible(true);
plot.setBackgroundAlpha(0f);
plot.setDomainGridlinePaint(Color.red);
plot.setRangeGridlinePaint(Color.blue);
}
