Пример #1
0
  /**
   * Cr�e une nouvelle instance de CreeTrans
   *
   * @param mf fenetre principale de l'application
   * @param zg Zone graphique
   * @param auto automate
   * @param be barre d'�tat
   */
  public TransCreator(MainFrame mf, GraphicZone g, Automate auto, StateBar be) {

    super(JOptionPane.getFrameForComponent(mf), "Creating interaction", true);

    this.setResizable(false);

    this.gz = g;
    this.auto = auto;
    this.bar = be;
    this.mf = mf;

    be.displayInfo("Creating interaction");

    tfJPanel1 = new JPanel(new FlowLayout(FlowLayout.LEFT));
    tfJPanel1.setBackground(Color.lightGray);
    tfJPanel1.add(new JLabel("Type  : "));
    groupe = new CheckboxGroup();
    plus = new Checkbox("activator", groupe, true);
    tfJPanel1.add(plus);
    minus = new Checkbox("inhibitor", groupe, false);
    tfJPanel1.add(minus);

    tfJPanel2 = new JPanel(new FlowLayout(FlowLayout.LEFT));
    tfJPanel2.setBackground(Color.lightGray);
    tfJPanel2.add(new JLabel("Threshold  = "));
    tf = new JTextField(auto.nbrCharTransLabel);
    tf.setText("1");
    tfJPanel2.add(tf);

    btJPanel = new JPanel(new GridLayout(1, 2, 0, 0));
    btJPanel.setBackground(Color.lightGray);
    ok = new Button("Ok");
    ok.setBackground(Color.lightGray);
    ok.addActionListener(this);
    cancel = new Button("Cancel");
    cancel.setBackground(Color.lightGray);
    cancel.addActionListener(this);
    btJPanel.add(ok);
    btJPanel.add(cancel);

    content = this.getContentPane();
    content.setLayout(new BorderLayout());
    content.setBackground(Color.lightGray);
    content.add(tfJPanel1, BorderLayout.NORTH);
    content.add(tfJPanel2, BorderLayout.CENTER);
    content.add(btJPanel, BorderLayout.SOUTH);

    this.pack();
    this.setLocationRelativeTo(this.mf);

    tf.requestFocusInWindow();

    // rendre la fenetre visible
    setVisible(true);
  }
Пример #2
0
  protected void createExeCancDefGroup(final QueryOptionsPack opt, int horizontalSpan) {
    // Group for execute, cancel and default buttons

    exeCancelDefaultGroup = new Group(shell, SWT.NONE);
    GridData gridData = new GridData(GridData.FILL, GridData.CENTER, false, false);
    gridData.horizontalSpan = horizontalSpan;
    exeCancelDefaultGroup.setLayoutData(gridData);
    exeCancelDefaultGroup.setLayout(new GridLayout(4, true));

    if (forSIF) {
      sifTypeButton = new Button(exeCancelDefaultGroup, SWT.NONE);
      sifTypeButton.setBackground(new Color(null, 255, 255, 255));
      gridData = new GridData(GridData.BEGINNING, GridData.CENTER, true, false);
      sifTypeButton.setLayoutData(gridData);
      sifTypeButton.addSelectionListener(
          new SelectionAdapter() {
            public void widgetSelected(SelectionEvent arg0) {
              ArrayList<SIFType> selection = new ArrayList<SIFType>(selectedTypes);
              ExportToSIFL3Dialog dialog =
                  new ExportToSIFL3Dialog(
                      main.getShell(),
                      org.gvt.model.sifl3.SIFGraph.getPossibleRuleTypes(),
                      selection);

              if (dialog.open()) {
                selectedTypes.clear();
                selectedTypes.addAll(selection);
                updateSIFTypeButtonText();
              }
            }
          });
      if (selectedTypes == null) selectedTypes = new ArrayList<SIFType>();
      updateSIFTypeButtonText();
    }

    // Execute Button

    executeButton = new Button(exeCancelDefaultGroup, SWT.NONE);
    executeButton.setText("Execute");
    gridData = new GridData(GridData.END, GridData.CENTER, true, false);
    executeButton.setLayoutData(gridData);
    executeButton.addSelectionListener(
        new SelectionAdapter() {
          public void widgetSelected(SelectionEvent arg0) {
            // if no entity is added, show error
            if ((sourceElg != null && getAddedSourceEntities().isEmpty())
                || (sourceST != null && sourceST.getSymbols().isEmpty())) {
              MessageDialog.openError(main.getShell(), "Error!", "Add Source Molecule!");

              return;
            }
            if ((targetElg != null && getAddedTargetEntities().isEmpty())
                || (targetST != null && targetST.getSymbols().isEmpty())) {
              MessageDialog.openError(main.getShell(), "Error!", "Add Target Molecule!");

              return;
            }

            if (forSIF && selectedTypes.isEmpty()) {
              MessageDialog.openError(
                  main.getShell(), "Error!", "Please select at least one interaction type.");

              return;
            }

            // Check for unknown gene symbols
            java.util.List<String> unkwn = getUnknownSymbols();
            if (!unkwn.isEmpty()) {
              String s = "";
              for (String us : unkwn) s += " " + us;

              MessageDialog.openError(
                  main.getShell(),
                  "Error!",
                  "Unknown symbol" + (unkwn.size() > 1 ? "s" : "") + ": " + s);

              return;
            }

            // store values in dialog to optionsPack
            storeValuesToOptionsPack(opt);

            // execute is selected
            opt.setCancel(false);

            shell.close();
          }
        });

    // Cancel Button

    cancelButton = new Button(exeCancelDefaultGroup, SWT.NONE);
    gridData = new GridData(GridData.CENTER, GridData.CENTER, true, false);
    createCancelButton(gridData);

    // Default Button

    defaultButton = new Button(exeCancelDefaultGroup, SWT.NONE);
    defaultButton.setText("Default");
    gridData = new GridData(GridData.BEGINNING, GridData.CENTER, true, false);
    defaultButton.setLayoutData(gridData);
    defaultButton.addSelectionListener(
        new SelectionAdapter() {
          public void widgetSelected(SelectionEvent arg0) {
            // set default values of dialog
            setDefaultQueryDialogOptions();
          }
        });
  }