public Point getPreferredLocation() { Rectangle maxBounds = GUI.getMaxWindowBounds(); int ijX = Prefs.getInt(IJ_X, -99); int ijY = Prefs.getInt(IJ_Y, -99); if (ijX >= maxBounds.x && ijY >= maxBounds.y && ijX < (maxBounds.x + maxBounds.width - 75)) return new Point(ijX, ijY); Dimension tbsize = toolbar.getPreferredSize(); int ijWidth = tbsize.width + 10; double percent = maxBounds.width > 832 ? 0.8 : 0.9; ijX = (int) (percent * (maxBounds.width - ijWidth)); if (ijX < 10) ijX = 10; return new Point(ijX, maxBounds.y); }
public Point getPreferredLocation() { if (!IJ.isJava14()) return new Point(0, 0); GraphicsEnvironment ge = GraphicsEnvironment.getLocalGraphicsEnvironment(); Rectangle maxBounds = ge.getMaximumWindowBounds(); int ijX = Prefs.getInt(IJ_X, -99); int ijY = Prefs.getInt(IJ_Y, -99); if (ijX >= 0 && ijY > 0 && ijX < (maxBounds.x + maxBounds.width - 75)) return new Point(ijX, ijY); Dimension tbsize = toolbar.getPreferredSize(); int ijWidth = tbsize.width + 10; double percent = maxBounds.width > 832 ? 0.8 : 0.9; ijX = (int) (percent * (maxBounds.width - ijWidth)); if (ijX < 10) ijX = 10; return new Point(ijX, maxBounds.y); }
void configureProxy() { if (Prefs.useSystemProxies) { try { System.setProperty("java.net.useSystemProxies", "true"); } catch (Exception e) { } } else { String server = Prefs.get("proxy.server", null); if (server == null || server.equals("")) return; int port = (int) Prefs.get("proxy.port", 0); if (port == 0) return; Properties props = System.getProperties(); props.put("proxySet", "true"); props.put("http.proxyHost", server); props.put("http.proxyPort", "" + port); } // new ProxySettings().logProperties(); }
/** Quit using a separate thread, hopefully avoiding thread deadlocks. */ public void run() { quitting = true; boolean changes = false; int[] wList = WindowManager.getIDList(); if (wList != null) { for (int i = 0; i < wList.length; i++) { ImagePlus imp = WindowManager.getImage(wList[i]); if (imp != null && imp.changes == true) { changes = true; break; } } } Frame[] frames = WindowManager.getNonImageWindows(); if (frames != null) { for (int i = 0; i < frames.length; i++) { if (frames[i] != null && (frames[i] instanceof Editor)) { if (((Editor) frames[i]).fileChanged()) { changes = true; break; } } } } if (windowClosed && !changes && Menus.window.getItemCount() > Menus.WINDOW_MENU_ITEMS && !(IJ.macroRunning() && WindowManager.getImageCount() == 0)) { GenericDialog gd = new GenericDialog("ImageJ", this); gd.addMessage("Are you sure you want to quit ImageJ?"); gd.showDialog(); quitting = !gd.wasCanceled(); windowClosed = false; } if (!quitting) return; if (!WindowManager.closeAllWindows()) { quitting = false; return; } // IJ.log("savePreferences"); if (applet == null) { saveWindowLocations(); Prefs.savePreferences(); } IJ.cleanup(); // setVisible(false); // IJ.log("dispose"); dispose(); if (exitWhenQuitting) System.exit(0); }
private void loadCursors() { Toolkit toolkit = Toolkit.getDefaultToolkit(); String path = Prefs.getImageJDir() + "images/crosshair-cursor.gif"; File f = new File(path); if (!f.exists()) return; // Image image = toolkit.getImage(path); ImageIcon icon = new ImageIcon(path); Image image = icon.getImage(); if (image == null) return; int width = icon.getIconWidth(); int height = icon.getIconHeight(); Point hotSpot = new Point(width / 2, height / 2); Cursor crosshairCursor = toolkit.createCustomCursor(image, hotSpot, "crosshair-cursor.gif"); ImageCanvas.setCursor(crosshairCursor, 0); }
void saveWindowLocations() { Window win = WindowManager.getWindow("B&C"); if (win != null) Prefs.saveLocation(ContrastAdjuster.LOC_KEY, win.getLocation()); win = WindowManager.getWindow("Threshold"); if (win != null) Prefs.saveLocation(ThresholdAdjuster.LOC_KEY, win.getLocation()); win = WindowManager.getWindow("Results"); if (win != null) { Prefs.saveLocation(TextWindow.LOC_KEY, win.getLocation()); Dimension d = win.getSize(); Prefs.set(TextWindow.WIDTH_KEY, d.width); Prefs.set(TextWindow.HEIGHT_KEY, d.height); } win = WindowManager.getWindow("Log"); if (win != null) { Prefs.saveLocation(TextWindow.LOG_LOC_KEY, win.getLocation()); Dimension d = win.getSize(); Prefs.set(TextWindow.LOG_WIDTH_KEY, d.width); Prefs.set(TextWindow.LOG_HEIGHT_KEY, d.height); } win = WindowManager.getWindow("ROI Manager"); if (win != null) Prefs.saveLocation(RoiManager.LOC_KEY, win.getLocation()); }
void saveWindowLocations() { Frame frame = WindowManager.getFrame("B&C"); if (frame != null) Prefs.saveLocation(ContrastAdjuster.LOC_KEY, frame.getLocation()); frame = WindowManager.getFrame("Threshold"); if (frame != null) Prefs.saveLocation(ThresholdAdjuster.LOC_KEY, frame.getLocation()); frame = WindowManager.getFrame("Results"); if (frame != null) { Prefs.saveLocation(TextWindow.LOC_KEY, frame.getLocation()); Dimension d = frame.getSize(); Prefs.set(TextWindow.WIDTH_KEY, d.width); Prefs.set(TextWindow.HEIGHT_KEY, d.height); } frame = WindowManager.getFrame("Log"); if (frame != null) { Prefs.saveLocation(TextWindow.LOG_LOC_KEY, frame.getLocation()); Dimension d = frame.getSize(); Prefs.set(TextWindow.LOG_WIDTH_KEY, d.width); Prefs.set(TextWindow.LOG_HEIGHT_KEY, d.height); } }
public void run(String arg) { if (arg.equals("menus")) { updateMenus(); return; } if (IJ.getApplet() != null) return; URL url = getClass().getResource("/ij/IJ.class"); String ij_jar = url == null ? null : url.toString().replaceAll("%20", " "); if (ij_jar == null || !ij_jar.startsWith("jar:file:")) { error("Could not determine location of ij.jar"); return; } int exclamation = ij_jar.indexOf('!'); ij_jar = ij_jar.substring(9, exclamation); if (IJ.debugMode) IJ.log("Updater (jar loc): " + ij_jar); File file = new File(ij_jar); if (!file.exists()) { error("File not found: " + file.getPath()); return; } if (!file.canWrite()) { String msg = "No write access: " + file.getPath(); error(msg); return; } String[] list = openUrlAsList(IJ.URL + "/download/jars/list.txt"); int count = list.length + 3; String[] versions = new String[count]; String[] urls = new String[count]; String uv = getUpgradeVersion(); if (uv == null) return; versions[0] = "v" + uv; urls[0] = IJ.URL + "/upgrade/ij.jar"; if (versions[0] == null) return; for (int i = 1; i < count - 2; i++) { String version = list[i - 1]; versions[i] = version.substring(0, version.length() - 1); // remove letter urls[i] = IJ.URL + "/download/jars/ij" + version.substring(1, 2) + version.substring(3, 6) + ".jar"; } versions[count - 2] = "daily build"; urls[count - 2] = IJ.URL + "/ij.jar"; versions[count - 1] = "previous"; urls[count - 1] = IJ.URL + "/upgrade/ij2.jar"; int choice = showDialog(versions); if (choice == -1 || !Commands.closeAll()) return; // System.out.println("choice: "+choice); // for (int i=0; i<urls.length; i++) System.out.println(" "+i+" "+urls[i]); byte[] jar = null; if ("daily build".equals(versions[choice]) && notes != null && notes.contains(" </title>")) jar = getJar("http://wsr.imagej.net/download/daily-build/ij.jar"); if (jar == null) jar = getJar(urls[choice]); if (jar == null) { error("Unable to download ij.jar from " + urls[choice]); return; } Prefs.savePreferences(); // System.out.println("saveJar: "+file); saveJar(file, jar); if (choice < count - 2) // force macro Function Finder to download fresh list new File(IJ.getDirectory("macros") + "functions.html").delete(); System.exit(0); }
public void run(String arg) { if (arg.equals("menus")) { updateMenus(); return; } if (IJ.getApplet() != null) return; // File file = new File(Prefs.getHomeDir() + File.separator + "ij.jar"); // if (isMac() && !file.exists()) // file = new File(Prefs.getHomeDir() + File.separator + // "ImageJ.app/Contents/Resources/Java/ij.jar"); URL url = getClass().getResource("/ij/IJ.class"); String ij_jar = url == null ? null : url.toString().replaceAll("%20", " "); if (ij_jar == null || !ij_jar.startsWith("jar:file:")) { error("Could not determine location of ij.jar"); return; } int exclamation = ij_jar.indexOf('!'); ij_jar = ij_jar.substring(9, exclamation); if (IJ.debugMode) IJ.log("Updater: " + ij_jar); File file = new File(ij_jar); if (!file.exists()) { error("File not found: " + file.getPath()); return; } if (!file.canWrite()) { String msg = "No write access: " + file.getPath(); if (IJ.isVista()) msg += Prefs.vistaHint; error(msg); return; } String[] list = openUrlAsList(IJ.URL + "/download/jars/list.txt"); int count = list.length + 2; String[] versions = new String[count]; String[] urls = new String[count]; String uv = getUpgradeVersion(); if (uv == null) return; versions[0] = "v" + uv; urls[0] = IJ.URL + "/upgrade/ij.jar"; if (versions[0] == null) return; for (int i = 1; i < count - 1; i++) { String version = list[i - 1]; versions[i] = version.substring(0, version.length() - 1); // remove letter urls[i] = IJ.URL + "/download/jars/ij" + version.substring(1, 2) + version.substring(3, 6) + ".jar"; } versions[count - 1] = "daily build"; urls[count - 1] = IJ.URL + "/ij.jar"; int choice = showDialog(versions); if (choice == -1) return; if (!versions[choice].startsWith("daily") && versions[choice].compareTo("v1.39") < 0 && Menus.getCommands().get("ImageJ Updater") == null) { String msg = "This command is not available in versions of ImageJ prior\n" + "to 1.39 so you will need to install the plugin version at\n" + "<" + IJ.URL + "/plugins/imagej-updater.html>."; if (!IJ.showMessageWithCancel("Update ImageJ", msg)) return; } byte[] jar = getJar(urls[choice]); // file.renameTo(new File(file.getParent()+File.separator+"ij.bak")); if (version().compareTo("1.37v") >= 0) Prefs.savePreferences(); // if (!renameJar(file)) return; // doesn't work on Vista saveJar(file, jar); if (choice < count - 1) // force macro Function Finder to download fresh list new File(IJ.getDirectory("macros") + "functions.html").delete(); System.exit(0); }
public static void main(String args[]) { if (System.getProperty("java.version").substring(0, 3).compareTo("1.5") < 0) { javax.swing.JOptionPane.showMessageDialog( null, "ImageJ " + VERSION + " requires Java 1.5 or later."); System.exit(0); } boolean noGUI = false; int mode = STANDALONE; arguments = args; // System.setProperty("file.encoding", "UTF-8"); int nArgs = args != null ? args.length : 0; boolean commandLine = false; for (int i = 0; i < nArgs; i++) { String arg = args[i]; if (arg == null) continue; if (args[i].startsWith("-")) { if (args[i].startsWith("-batch")) noGUI = true; else if (args[i].startsWith("-debug")) IJ.setDebugMode(true); else if (args[i].startsWith("-ijpath") && i + 1 < nArgs) { if (IJ.debugMode) IJ.log("-ijpath: " + args[i + 1]); Prefs.setHomeDir(args[i + 1]); commandLine = true; args[i + 1] = null; } else if (args[i].startsWith("-port")) { int delta = (int) Tools.parseDouble(args[i].substring(5, args[i].length()), 0.0); commandLine = true; if (delta == 0) mode = EMBEDDED; else if (delta > 0 && DEFAULT_PORT + delta < 65536) port = DEFAULT_PORT + delta; } } } // If existing ImageJ instance, pass arguments to it and quit. boolean passArgs = mode == STANDALONE && !noGUI; if (IJ.isMacOSX() && !commandLine) passArgs = false; if (passArgs && isRunning(args)) return; ImageJ ij = IJ.getInstance(); if (!noGUI && (ij == null || (ij != null && !ij.isShowing()))) { ij = new ImageJ(null, mode); ij.exitWhenQuitting = true; } int macros = 0; for (int i = 0; i < nArgs; i++) { String arg = args[i]; if (arg == null) continue; if (arg.startsWith("-")) { if ((arg.startsWith("-macro") || arg.startsWith("-batch")) && i + 1 < nArgs) { String arg2 = i + 2 < nArgs ? args[i + 2] : null; Prefs.commandLineMacro = true; if (noGUI && args[i + 1].endsWith(".js")) Interpreter.batchMode = true; IJ.runMacroFile(args[i + 1], arg2); break; } else if (arg.startsWith("-eval") && i + 1 < nArgs) { String rtn = IJ.runMacro(args[i + 1]); if (rtn != null) System.out.print(rtn); args[i + 1] = null; } else if (arg.startsWith("-run") && i + 1 < nArgs) { IJ.run(args[i + 1]); args[i + 1] = null; } } else if (macros == 0 && (arg.endsWith(".ijm") || arg.endsWith(".txt"))) { IJ.runMacroFile(arg); macros++; } else if (arg.length() > 0 && arg.indexOf("ij.ImageJ") == -1) { File file = new File(arg); IJ.open(file.getAbsolutePath()); } } if (IJ.debugMode && IJ.getInstance() == null) new JavaProperties().run(""); if (noGUI) System.exit(0); }
/** * If 'applet' is not null, creates a new ImageJ frame that runs as an applet. If 'mode' is * ImageJ.EMBEDDED and 'applet is null, creates an embedded (non-standalone) version of ImageJ. */ public ImageJ(java.applet.Applet applet, int mode) { super("ImageJ"); if ((mode & DEBUG) != 0) IJ.setDebugMode(true); mode = mode & 255; if (IJ.debugMode) IJ.log("ImageJ starting in debug mode: " + mode); embedded = applet == null && (mode == EMBEDDED || mode == NO_SHOW); this.applet = applet; String err1 = Prefs.load(this, applet); setBackground(backgroundColor); Menus m = new Menus(this, applet); String err2 = m.addMenuBar(); m.installPopupMenu(this); setLayout(new BorderLayout()); // Tool bar toolbar = new Toolbar(); toolbar.addKeyListener(this); add("Center", toolbar); // Status bar statusBar = new Panel(); statusBar.setLayout(new BorderLayout()); statusBar.setForeground(Color.black); statusBar.setBackground(backgroundColor); statusLine = new JLabel(); statusLine.setFont(new Font("SansSerif", Font.PLAIN, 13)); statusLine.addKeyListener(this); statusLine.addMouseListener(this); statusBar.add("Center", statusLine); progressBar = new ProgressBar(120, 20); progressBar.addKeyListener(this); progressBar.addMouseListener(this); statusBar.add("East", progressBar); add("South", statusBar); IJ.init(this, applet); addKeyListener(this); addWindowListener(this); setFocusTraversalKeysEnabled(false); m.installStartupMacroSet(); // add custom tools runStartupMacro(); Point loc = getPreferredLocation(); Dimension tbSize = toolbar.getPreferredSize(); setCursor(Cursor.getDefaultCursor()); // work-around for JDK 1.1.8 bug if (mode != NO_SHOW) { if (IJ.isWindows()) try { setIcon(); } catch (Exception e) { } setLocation(loc.x, loc.y); setResizable(!IJ.isMacOSX()); pack(); setVisible(true); } if (err1 != null) IJ.error(err1); if (err2 != null) { IJ.error(err2); IJ.runPlugIn("ij.plugin.ClassChecker", ""); } if (IJ.isMacintosh() && applet == null) { Object qh = null; qh = IJ.runPlugIn("MacAdapter", ""); if (qh == null) IJ.runPlugIn("QuitHandler", ""); } if (applet == null) IJ.runPlugIn("ij.plugin.DragAndDrop", ""); String str = m.getMacroCount() == 1 ? " macro" : " macros"; IJ.showStatus(version() + m.getPluginCount() + " commands; " + m.getMacroCount() + str); configureProxy(); if (applet == null) loadCursors(); }
/** * If 'applet' is not null, creates a new ImageJ frame that runs as an applet. If 'mode' is * ImageJ.EMBEDDED and 'applet is null, creates an embedded (non-standalone) version of ImageJ. */ public ImageJ(java.applet.Applet applet, int mode) { super("ImageJ"); embedded = applet == null && (mode == EMBEDDED || mode == NO_SHOW); this.applet = applet; String err1 = Prefs.load(this, applet); if (IJ.isLinux()) { backgroundColor = new Color(240, 240, 240); setBackground(backgroundColor); } Menus m = new Menus(this, applet); String err2 = m.addMenuBar(); m.installPopupMenu(this); setLayout(new GridLayout(2, 1)); // Tool bar toolbar = new Toolbar(); toolbar.addKeyListener(this); add(toolbar); // Status bar statusBar = new Panel(); statusBar.setLayout(new BorderLayout()); statusBar.setForeground(Color.black); statusBar.setBackground(backgroundColor); statusLine = new Label(); statusLine.setFont(SansSerif12); statusLine.addKeyListener(this); statusLine.addMouseListener(this); statusBar.add("Center", statusLine); progressBar = new ProgressBar(120, 20); progressBar.addKeyListener(this); progressBar.addMouseListener(this); statusBar.add("East", progressBar); statusBar.setSize(toolbar.getPreferredSize()); add(statusBar); IJ.init(this, applet); addKeyListener(this); addWindowListener(this); setFocusTraversalKeysEnabled(false); Point loc = getPreferredLocation(); Dimension tbSize = toolbar.getPreferredSize(); int ijWidth = tbSize.width + 10; int ijHeight = 100; setCursor(Cursor.getDefaultCursor()); // work-around for JDK 1.1.8 bug if (mode != NO_SHOW) { if (IJ.isWindows()) try { setIcon(); } catch (Exception e) { } setBounds(loc.x, loc.y, ijWidth, ijHeight); // needed for pack to work setLocation(loc.x, loc.y); pack(); setResizable(!(IJ.isMacintosh() || IJ.isWindows())); // make resizable on Linux show(); } if (err1 != null) IJ.error(err1); if (err2 != null) { IJ.error(err2); IJ.runPlugIn("ij.plugin.ClassChecker", ""); } m.installStartupMacroSet(); if (IJ.isMacintosh() && applet == null) { Object qh = null; qh = IJ.runPlugIn("MacAdapter", ""); if (qh == null) IJ.runPlugIn("QuitHandler", ""); } if (applet == null) IJ.runPlugIn("ij.plugin.DragAndDrop", ""); String str = m.getMacroCount() == 1 ? " macro" : " macros"; IJ.showStatus(version() + m.getPluginCount() + " commands; " + m.getMacroCount() + str); // if (applet==null && !embedded && Prefs.runSocketListener) // new SocketListener(); configureProxy(); if (applet == null) loadCursors(); }