Пример #1
0
 private void repaintTrack() {
   // Update tracks
   Track[] tracks = MainFrame.getInstance().getTrackListPanel().getModel().getTracks();
   for (Track track : tracks) {
     track.repaint();
   }
 }
Пример #2
0
 private void setTrackLock(boolean lock) {
   // Update tracks
   LayerType[] filter = {LayerType.VARIANT_LAYER};
   List<Layer<?>> allLayers =
       MainFrame.getInstance().getTrackListPanel().getModel().getAllLayers();
   List<Layer<?>> layers = Utils.getLayers(allLayers, filter);
   for (Layer<?> layer : layers) {
     if (lock) {
       ((VariantLayer) layer).getGenomeDrawer().lockPainting();
     } else {
       ((VariantLayer) layer).getGenomeDrawer().unlockPainting();
     }
   }
 }
Пример #3
0
  @Override
  public void trackListActionPerformed(ActionEvent arg0) {
    if (MainFrame.getInstance().isLocked()) {
      return;
    }

    final Track selectedTrack = getTrackListPanel().getSelectedTrack();
    if (selectedTrack != null) {
      VariantLayerDisplaySettings data = AddOrEditVariantLayerDialog.showAddDialog(getRootPane());
      if (data != null) {
        MGDisplaySettings settings = MGDisplaySettings.getInstance();
        VariantLayer newLayer = new VariantLayer(selectedTrack);
        newLayer.setData(data);
        selectedTrack.getLayers().add(newLayer);
        selectedTrack.setActiveLayer(newLayer);
        // Updates track (filters, display)
        MGARefresh action = new MGARefresh();
        action.setPreviousFilterList(settings.getFilterSettings().getAllMGFilters());
        action.actionPerformed(null);
      }
    }
  }