public AncestralStatesPanel(BeautiFrame parent) {
super();
this.frame = parent;
partitionTableModel = new PartitionTableModel();
partitionTable = new JTable(partitionTableModel);
partitionTable.getTableHeader().setReorderingAllowed(false);
partitionTable.getTableHeader().setResizingAllowed(false);
// modelTable.getTableHeader().setDefaultRenderer(
// new HeaderRenderer(SwingConstants.LEFT, new Insets(0, 4, 0, 4)));
final TableColumnModel model = partitionTable.getColumnModel();
final TableColumn tableColumn0 = model.getColumn(0);
TableEditorStopper.ensureEditingStopWhenTableLosesFocus(partitionTable);
partitionTable.getSelectionModel().setSelectionMode(ListSelectionModel.SINGLE_SELECTION);
partitionTable
.getSelectionModel()
.addListSelectionListener(
new ListSelectionListener() {
public void valueChanged(ListSelectionEvent evt) {
selectionChanged();
}
});
JScrollPane scrollPane =
new JScrollPane(
partitionTable,
JScrollPane.VERTICAL_SCROLLBAR_ALWAYS,
JScrollPane.HORIZONTAL_SCROLLBAR_AS_NEEDED);
scrollPane.setOpaque(false);
JPanel panel = new JPanel(new BorderLayout(0, 0));
panel.setOpaque(false);
panel.add(scrollPane, BorderLayout.CENTER);
panel.setMinimumSize(new Dimension(MINIMUM_TABLE_WIDTH, 0));
optionsPanelParent = new JPanel(new FlowLayout(FlowLayout.CENTER));
optionsPanelParent.setOpaque(false);
optionsBorder = new TitledBorder("Ancestral state options:");
optionsPanelParent.setBorder(optionsBorder);
setCurrentPartition(null);
JScrollPane scrollPane2 =
new JScrollPane(
optionsPanelParent,
JScrollPane.VERTICAL_SCROLLBAR_AS_NEEDED,
JScrollPane.HORIZONTAL_SCROLLBAR_NEVER);
scrollPane2.setOpaque(false);
scrollPane2.setBorder(null);
scrollPane2.getViewport().setOpaque(false);
JSplitPane splitPane = new JSplitPane(JSplitPane.HORIZONTAL_SPLIT, panel, scrollPane2);
splitPane.setDividerLocation(MINIMUM_TABLE_WIDTH);
splitPane.setContinuousLayout(true);
splitPane.setBorder(BorderFactory.createEmptyBorder());
splitPane.setOpaque(false);
setOpaque(false);
setBorder(new BorderUIResource.EmptyBorderUIResource(new Insets(12, 12, 12, 12)));
setLayout(new BorderLayout(0, 0));
add(splitPane, BorderLayout.CENTER);
}
public InputPanel(
final TreeSpaceFrame parent, final TreeSpaceDocument document, final Action addDataAction) {
this.frame = parent;
this.document = document;
dataTableModel = new DataTableModel();
dataTable = new JTable(dataTableModel);
dataTable.getTableHeader().setReorderingAllowed(false);
// dataTable.getTableHeader().setDefaultRenderer(
// new HeaderRenderer(SwingConstants.LEFT, new Insets(0, 4, 0, 4)));
TableColumn col = dataTable.getColumnModel().getColumn(0);
col.setCellRenderer(new MultiLineTableCellRenderer());
dataTable.setRowHeight(dataTable.getRowHeight() * 2);
dataTable.setDragEnabled(false);
dataTable.setTransferHandler(new FSTransfer());
TableEditorStopper.ensureEditingStopWhenTableLosesFocus(dataTable);
dataTable
.getSelectionModel()
.addListSelectionListener(
new ListSelectionListener() {
public void valueChanged(ListSelectionEvent evt) {
selectionChanged();
}
});
dataTable.addMouseListener(
new MouseAdapter() {
public void mouseClicked(MouseEvent e) {
if (e.getClickCount() == 2) {
editSelection();
}
}
});
scrollPane =
new JScrollPane(
dataTable,
JScrollPane.VERTICAL_SCROLLBAR_ALWAYS,
JScrollPane.HORIZONTAL_SCROLLBAR_ALWAYS);
scrollPane.setOpaque(false);
// JToolBar toolBar1 = new JToolBar();
// toolBar1.setFloatable(false);
// toolBar1.setOpaque(false);
// toolBar1.setLayout(new FlowLayout(FlowLayout.LEFT, 0, 0));
// JButton button = new JButton(unlinkModelsAction);
// unlinkModelsAction.setEnabled(false);
// PanelUtils.setupComponent(button);
// toolBar1.add(button);
ActionPanel actionPanel1 = new ActionPanel(true);
actionPanel1.setAddAction(addDataAction);
actionPanel1.setRemoveAction(removeAction);
removeAction.setEnabled(false);
JPanel controlPanel1 = new JPanel(new FlowLayout(FlowLayout.LEFT));
controlPanel1.setOpaque(false);
controlPanel1.add(actionPanel1);
setOpaque(false);
setBorder(new BorderUIResource.EmptyBorderUIResource(new Insets(12, 12, 12, 12)));
setLayout(new BorderLayout(0, 0));
// add(toolBar1, BorderLayout.NORTH);
add(scrollPane, BorderLayout.CENTER);
add(controlPanel1, BorderLayout.SOUTH);
document.addListener(
new TreeSpaceDocument.Listener() {
public void dataChanged() {
dataTableModel.fireTableDataChanged();
}
public void settingsChanged() {}
});
}
public DataPanel(
BeautiFrame parent,
Action importDataAction,
Action removeDataAction /*, Action importTraitsAction*/) {
this.frame = parent;
dataTableModel = new DataTableModel();
dataTable = new JTable(dataTableModel);
dataTable.getTableHeader().setReorderingAllowed(false);
dataTable
.getTableHeader()
.setDefaultRenderer(new HeaderRenderer(SwingConstants.LEFT, new Insets(0, 4, 0, 4)));
TableColumn col = dataTable.getColumnModel().getColumn(5);
ComboBoxRenderer comboBoxRenderer = new ComboBoxRenderer();
comboBoxRenderer.putClientProperty("JComboBox.isTableCellEditor", Boolean.TRUE);
col.setCellRenderer(comboBoxRenderer);
// col = dataTable.getColumnModel().getColumn(5);
// comboBoxRenderer = new ComboBoxRenderer();
// comboBoxRenderer.putClientProperty("JComboBox.isTableCellEditor", Boolean.TRUE);
// col.setCellRenderer(comboBoxRenderer);
col = dataTable.getColumnModel().getColumn(6);
comboBoxRenderer = new ComboBoxRenderer();
comboBoxRenderer.putClientProperty("JComboBox.isTableCellEditor", Boolean.TRUE);
col.setCellRenderer(comboBoxRenderer);
col = dataTable.getColumnModel().getColumn(7);
comboBoxRenderer = new ComboBoxRenderer();
comboBoxRenderer.putClientProperty("JComboBox.isTableCellEditor", Boolean.TRUE);
col.setCellRenderer(comboBoxRenderer);
TableEditorStopper.ensureEditingStopWhenTableLosesFocus(dataTable);
dataTable
.getSelectionModel()
.addListSelectionListener(
new ListSelectionListener() {
public void valueChanged(ListSelectionEvent evt) {
selectionChanged();
}
});
dataTable.addMouseListener(
new MouseAdapter() {
public void mouseClicked(MouseEvent e) {
if (e.getClickCount() == 2) {
showAlignment();
}
}
});
scrollPane =
new JScrollPane(
dataTable,
JScrollPane.VERTICAL_SCROLLBAR_ALWAYS,
JScrollPane.HORIZONTAL_SCROLLBAR_ALWAYS);
scrollPane.setOpaque(false);
JToolBar toolBar1 = new JToolBar();
toolBar1.setFloatable(false);
toolBar1.setOpaque(false);
toolBar1.setLayout(new BoxLayout(toolBar1, BoxLayout.X_AXIS));
JButton button = new JButton(unlinkModelsAction);
unlinkModelsAction.setEnabled(false);
PanelUtils.setupComponent(button);
toolBar1.add(button);
button = new JButton(linkModelsAction);
linkModelsAction.setEnabled(false);
PanelUtils.setupComponent(button);
toolBar1.add(button);
toolBar1.addSeparator();
button = new JButton(unlinkClocksAction);
unlinkClocksAction.setEnabled(false);
PanelUtils.setupComponent(button);
toolBar1.add(button);
button = new JButton(linkClocksAction);
linkClocksAction.setEnabled(false);
PanelUtils.setupComponent(button);
toolBar1.add(button);
toolBar1.addSeparator();
button = new JButton(unlinkTreesAction);
unlinkTreesAction.setEnabled(false);
PanelUtils.setupComponent(button);
toolBar1.add(button);
button = new JButton(linkTreesAction);
linkTreesAction.setEnabled(false);
PanelUtils.setupComponent(button);
toolBar1.add(button);
// too crowded on the toolbar - just double click to show
// button = new JButton(showAction);
// showAction.setEnabled(false);
// PanelUtils.setupComponent(button);
// toolBar1.add(button);
ActionPanel actionPanel1 = new ActionPanel(false);
actionPanel1.setAddAction(importDataAction);
actionPanel1.setRemoveAction(removeDataAction);
removeDataAction.setEnabled(false);
JPanel controlPanel1 = new JPanel(new FlowLayout(FlowLayout.LEFT));
controlPanel1.setOpaque(false);
controlPanel1.add(actionPanel1);
controlPanel1.add(new JLabel(" "));
PanelUtils.setupComponent(createImportTraitButton);
controlPanel1.add(createImportTraitButton);
// controlPanel1.add(new JLabel(" or "));
//
// button = new JButton(importTraitsAction);
// PanelUtils.setupComponent(button);
// controlPanel1.add(button);
JPanel panel1 = new JPanel(new BorderLayout());
panel1.setOpaque(false);
panel1.add(useStarBEASTCheck, BorderLayout.NORTH);
panel1.add(toolBar1, BorderLayout.SOUTH);
setOpaque(false);
setBorder(new BorderUIResource.EmptyBorderUIResource(new Insets(12, 12, 12, 12)));
setLayout(new BorderLayout(0, 0));
add(panel1, BorderLayout.NORTH);
add(scrollPane, BorderLayout.CENTER);
add(controlPanel1, BorderLayout.SOUTH);
useStarBEASTCheck.setEnabled(false);
useStarBEASTCheck.setToolTipText(STARBEASTOptions.CITATION);
useStarBEASTCheck.addActionListener(
new java.awt.event.ActionListener() {
public void actionPerformed(
ActionEvent e) { // wrong listener Issue 397: *BEAST in BEAUti is broken
frame.setupStarBEAST(useStarBEASTCheck.isSelected());
dataTableModel.fireTableDataChanged();
}
});
}