@Test
public void substituteDotDot() {
eval(" f<- function(...) substitute(list(...)) ");
assertThat(
eval("f(a,b)"),
equalTo(
(SEXP)
new FunctionCall(
Symbol.get("list"),
PairList.Node.fromArray(Symbol.get("a"), Symbol.get("b")))));
}
public Builder add(String name, SEXP value) {
SEXP tag = Null.INSTANCE;
if (!Strings.isNullOrEmpty(name)) {
tag = Symbol.get(name);
}
return add(tag, value);
}
/**
* Returns a canonical mapping for the specified nonterminal label; if <code>label</code> already
* is in canonical form, it is returned. The canonical mapping refers to transformations performed
* on nonterminals during the training process. Before obtaining a label's canonical form, it is
* also stripped of all Treebank augmentations, meaning that only the characters before the first
* occurrence of '-', '=' or '|' are kept.
*
* @return a <code>Symbol</code> with the same print name as <code>label</code>, except that all
* training transformations and Treebank augmentations have been undone and stripped
*/
public final Symbol getCanonical(Symbol label) {
if (outputLexLabels) {
char lbracket = nonTreebankLeftBracket();
char rbracket = nonTreebankRightBracket();
int lbracketIdx = label.toString().indexOf(lbracket);
int rbracketIdx = label.toString().indexOf(rbracket);
if (lbracketIdx != -1 && rbracketIdx != -1) {
String labelStr = label.toString();
Symbol unlexLabel =
Symbol.get(labelStr.substring(0, lbracketIdx) + labelStr.substring(rbracketIdx + 1));
String canonStr = defaultGetCanonical(unlexLabel).toString();
return Symbol.get(canonStr + labelStr.substring(lbracketIdx, rbracketIdx + 1));
}
}
return defaultGetCanonical(label);
}
@Test
public void substituteWithMissingEllipses() {
eval(" f<- function(a=1) substitute(list(...)) ");
assertThat(
eval("f()"),
equalTo(
(SEXP)
new FunctionCall(Symbol.get("list"), PairList.Node.fromArray(Symbols.ELLIPSES))));
}
/**
* Executes the default the standard R initialization sequence:
*
* <ol>
* <li>Load the base package (/org/renjin/library/base/R/base)
* <li>Execute the system profile (/org/renjin/library/base/R/Rprofile)
* <li>Evaluate .OptRequireMethods()
* <li>Evaluate .First.Sys()
* </ol>
*/
public void init() throws IOException {
BaseFrame baseFrame = (BaseFrame) session.getBaseEnvironment().getFrame();
baseFrame.load(this);
evaluate(FunctionCall.newCall(Symbol.get(".onLoad")), session.getBaseNamespaceEnv());
// evalBaseResource("/org/renjin/library/base/R/Rprofile");
//
// // FunctionCall.newCall(new Symbol(".OptRequireMethods")).evaluate(this, environment);
// evaluate( FunctionCall.newCall(Symbol.get(".First.sys")), environment);
}
/** * Implements an interface to the Jakarta ORO regular expression engine. * * <p>The Scheme API is composed of the following functions: * * <ul> * <li><b>regexp/pattern</b> <it>string</it> [<it>type</it> <it>options</it>] -> <it>pattern</it> * <br> * <p>Compiles a string representing a regular expression into a pattern object. <it>type</it> * is a symbol describing the type of regular expression; currently supported types are * <it>glob</it>, <it>perl5</it>, or <it>awk</it>. If no regexp type is specified, the default * one is <it>perl5</it>. * <p>If the <it>options</it> argument is present, it is a list composed of any of the * following symbols: * <ul> * <li>case-insensitive</it> * <li>multiline</it> * </ul> * <li><b>regexp/match</b> <it>string</it> <it>pattern</it> -> #f | list of <it>matches</it><br> * <p>Try to match <it>pattern</it> on the input string. If there's no match <tt>#f</tt> is * returned, otherwise a list of <it>matches</it> is returned. A <it>match</it> is a cons cell * containing the beginning and end positions of a match group. * </ul> * * @author <a href="mailto:[email protected]">Ovidiu Predescu</a> * @since December 14, 2001 * @see org.apache.oro.text.regex.Pattern * @see org.apache.oro.text.regex.PatternCompiler * @see org.apache.oro.text.regex.PatternMatcher */ public class Regexp extends IndexedProcedure { public Regexp(int id) { super(id); } public static final int RPATTERN = 1, RMATCH = 2, RMATCH_POSITIONS = 3, RREPLACE = 4, RREPLACE_ALL = 5, RSPLIT = 6, RSPLIT_DELIM = 7; public static final Symbol REGEX_PERL5 = Symbol.get("perl5"), REGEX_GLOB = Symbol.get("glob"), REGEX_AWK = Symbol.get("awk"), CASE_INSENSITIVE = Symbol.get("case-insensitive"), EXTENDED = Symbol.get("extended"), SINGLELINE = Symbol.get("singleline"), MULTILINE = Symbol.get("multiline"); public static final int optionsFromScheme(Value value, Value type) { if (value instanceof Symbol) { if (value == CASE_INSENSITIVE) { if (type == REGEX_PERL5) return Perl5Compiler.CASE_INSENSITIVE_MASK; else if (type == REGEX_GLOB) return GlobCompiler.CASE_INSENSITIVE_MASK; else if (type == REGEX_AWK) return AwkCompiler.CASE_INSENSITIVE_MASK; else throw new RuntimeException("Unknown compiler " + type); } else if (value == EXTENDED) { if (type == REGEX_PERL5) return Perl5Compiler.EXTENDED_MASK; else throw new RuntimeException("The extended mask is supported only by Perl5 regexps"); } else if (value == SINGLELINE) { if (type == REGEX_PERL5) return Perl5Compiler.SINGLELINE_MASK; else throw new RuntimeException("The singleline mask is supported only by Perl5 regexps"); } else if (value == MULTILINE) { if (type == REGEX_PERL5) return Perl5Compiler.MULTILINE_MASK; else if (type == REGEX_GLOB) throw new RuntimeException("Glob compiler doesn't support this option: " + value); else if (type == REGEX_AWK) return AwkCompiler.MULTILINE_MASK; } else throw new RuntimeException("Unsupported regexp option " + value); } else if (value instanceof Pair) { int options = 0; Pair pv = (Pair) value; while (pv != EMPTYLIST) { options |= optionsFromScheme(pv.car(), type); pv = (Pair) pv.cdr(); } return options; } else throw new RuntimeException("Invalid format for options " + value); // Not reached, but keeps the Java compiler happy return 0; } public static class Index extends IndexedLibraryAdapter { public String getLibraryName() { return "Jakarta ORO regexp"; } public float getLibraryVersion() { return 1.0f; } public Value construct(Object context, int id) { return new Regexp(id); } public Index() { define("regexp", RPATTERN); define("regexp-match", RMATCH); define("regexp-match-positions", RMATCH_POSITIONS); define("regexp-replace", RREPLACE); define("regexp-replace*", RREPLACE_ALL); define("regexp-split", RSPLIT); define("regexp-split/delimiter", RSPLIT_DELIM); } } protected static RPattern patternFor(Value v) { RPattern pat; if (v instanceof RPattern) pat = (RPattern) v; else pat = new RPattern(string(v)); return pat; } public Value doApply(Interpreter r) throws ContinuationException { switch (r.vlr.length) { // One argument functions case 1: if (id == RPATTERN) return new RPattern(string(r.vlr[0]), REGEX_PERL5, 0); else break; // Two argument functions case 2: switch (id) { case RPATTERN: return new RPattern(string(r.vlr[0]), r.vlr[1], 0); case RMATCH: return patternFor(r.vlr[0]).match(r.vlr[1]); case RMATCH_POSITIONS: return patternFor(r.vlr[0]).matchPositions(r.vlr[1]); case RSPLIT: return RPattern.splitNoDelimiters(r.vlr[0], r.vlr[1]); case RSPLIT_DELIM: return patternFor(r.vlr[0]).splitWithDelimiters(r.vlr[1]); default: break; } // Three argument functions case 3: switch (id) { case RPATTERN: return new RPattern(string(r.vlr[0]), r.vlr[1], optionsFromScheme(r.vlr[2], r.vlr[1])); case RREPLACE: return patternFor(r.vlr[0]).replaceFirst(r.vlr[1], r.vlr[2]); case RREPLACE_ALL: return patternFor(r.vlr[0]).replaceAll(r.vlr[1], r.vlr[2]); default: break; } } throw new RuntimeException("Invalid number of arguments to function " + r.acc); } public static class RPattern extends Value { public Pattern pattern; Symbol type; int options; public RPattern() {} public RPattern(String pat) { setup(pat, REGEX_PERL5, 0); } public RPattern(String pat, Value type, int options) { setup(pat, type, options); } public void setup(String pat, Value type, int options) { try { if (type == REGEX_PERL5) pattern = (new Perl5Compiler()).compile(pat, options); else if (type == REGEX_GLOB) pattern = (new GlobCompiler()).compile(pat, options); else if (type == REGEX_AWK) pattern = (new AwkCompiler()).compile(pat, options); else throw new RuntimeException("unkown regular expression type: " + type); } catch (MalformedPatternException ex) { throw new RuntimeException("Malformed pattern: " + pat + "\n" + ex); } this.type = (Symbol) type; this.options = options; } protected PatternMatcher getMatcher() { if (type == REGEX_PERL5 || type == REGEX_GLOB) return new Perl5Matcher(); else if (type == REGEX_AWK) return new AwkMatcher(); else throw new RuntimeException("Unknown regular expression type: " + type); } public Value match(Value str) { PatternMatcher matcher = getMatcher(); // Do the matching PatternMatcherInput jStr = new PatternMatcherInput(string(str)); Pair result = null; Pair prev = null; boolean found = false; while (matcher.contains(jStr, pattern)) { found = true; MatchResult matchResult = matcher.getMatch(); for (int i = 0, length = matchResult.groups(); i < length; i++) { Pair m = new Pair(new SchemeString(matchResult.group(i)), EMPTYLIST); if (result == null) result = prev = m; else { prev.setCdr(m); prev = m; } } } if (!found) return FALSE; else return result; } public Value matchPositions(Value str) { PatternMatcher matcher = getMatcher(); // Do the matching PatternMatcherInput jStr = new PatternMatcherInput(string(str)); Pair result = null; Pair prev = null; boolean found = false; while (matcher.contains(jStr, pattern)) { found = true; MatchResult matchResult = matcher.getMatch(); for (int i = 0, length = matchResult.groups(); i < length; i++) { Pair m = new Pair( Quantity.valueOf(matchResult.beginOffset(i)), Quantity.valueOf(matchResult.endOffset(i))); Pair elem = new Pair(m, EMPTYLIST); if (result == null) result = prev = elem; else { prev.setCdr(elem); prev = elem; } } } if (!found) return FALSE; else return result; } public Value replaceFirst(Value input, Value substitution) { String result = Util.substitute( getMatcher(), pattern, new StringSubstitution(string(substitution)), string(input)); return new SchemeString(result); } public Value replaceAll(Value input, Value substitution) { String result = Util.substitute( getMatcher(), pattern, new StringSubstitution(string(substitution)), string(input), Util.SUBSTITUTE_ALL); return new SchemeString(result); } public static Value splitNoDelimiters(Value pat, Value input) { String pattern; if (pat instanceof RPattern) pattern = ((RPattern) pat).pattern.getPattern(); else pattern = string(pat); ArrayList list = new ArrayList(); (new Perl5Util()).split(list, pattern, string(input)); SchemeVector result = new SchemeVector(list.size()); for (int i = 0, length = list.size(); i < length; i++) result.vals[i] = new SchemeString((String) list.get(i)); return result; } public Value splitWithDelimiters(Value input) { try { ArrayList list = new ArrayList(); Util.split(list, getMatcher(), pattern, string(input)); SchemeVector result = new SchemeVector(list.size()); for (int i = 0, length = list.size(); i < length; i++) result.vals[i] = new SchemeString((String) list.get(i)); return result; } catch (Exception ex) { System.out.println("error: " + ex); ex.printStackTrace(); throw new RuntimeException(ex.toString()); } } public void display(ValueWriter w) throws IOException { w.append("#<regexp ") .append(pattern.getClass().getName()) .append(" '") .append(pattern.getPattern().toString()) .append("'>"); } public boolean valueEqual(Value ov) { return (ov instanceof RPattern) && pattern.equals(((RPattern) ov).pattern); } public void serialize(sisc.ser.Serializer s) throws IOException { s.writeExpression(type); s.writeUTF(pattern.getPattern()); s.writeInt(pattern.getOptions()); } public void deserialize(sisc.ser.Deserializer s) throws IOException { type = (Symbol) s.readExpression(); String pat = s.readUTF(); options = s.readInt(); setup(pat, type, options); } } }
public class ObjectDOSBuiltInFunctionsTest {
ObjectDOS vm;
ObjectDOS object;
ObjectDOS value;
Symbol local = Symbol.get("local");
private OpCodeInterpreter interpreter;
private Environment environment;
private Activation context;
@Before
public void setUp() {
interpreter = new OpCodeInterpreter();
environment = interpreter.getEnvironment();
vm = VMObjectDOS.getVMObject(environment);
object = environment.createNewObject();
value = environment.createNewObject();
context = interpreter.newActivation();
context.setVictim(environment.createNewObject());
}
@Test
public void shouldSetSlotInCurrentFunction() {
FunctionDOS function = createFunctionThatSetsAndReturnsValueToLocal();
ObjectDOS result = function.execute(interpreter, object, new ArrayList<ObjectDOS>());
assertThat(((ValueObject) result).getValue(), is(1234));
}
@Test
public void shouldSetSlotInCurrentContextualFunction() {
FunctionWithContext function =
environment.createFunctionWithContext(
createFunctionThatSetsAndReturnsValueToLocal(), context);
ObjectDOS result = function.execute(interpreter, object, new ArrayList<ObjectDOS>());
assertThat(((ValueObject) result).getValue(), is(1234));
assertThat(context.getSlot(local), is(environment.getUndefined()));
}
@Test
public void shouldSetSlotInFunctionsContext() {
context.setSlot(local, environment.getUndefined());
FunctionWithContext function = createFunctionWithContextThatSetsLocalToValue(context);
function.execute(interpreter, object, new ArrayList<ObjectDOS>());
assertThat(((ValueObject) context.getSlot(local)).getValue(), is(1234));
}
@Test
public void shouldSetSlotInObject() {
object.setSlot(local, environment.getUndefined());
FunctionWithContext function = createFunctionWithContextThatSetsLocalToValue(context);
function.execute(interpreter, object, new ArrayList<ObjectDOS>());
assertThat(context.getSlot(local), is(environment.getUndefined()));
assertThat(((ValueObject) object.getSlot(local)).getValue(), is(1234));
}
private FunctionWithContext createFunctionWithContextThatSetsLocalToValue(
Activation localContext) {
FunctionWithContext function =
environment.createFunctionWithContext(
new Symbol[] {},
new OpCode[] {
new OpCode.CreateValueObject(1234),
new OpCode.PushSymbol(local),
new OpCode.Push(Symbol.RESULT),
new OpCode.FunctionCall(Symbol.SET_SLOT_$_TO_$)
},
localContext);
return function;
}
private FunctionDOS createFunctionThatSetsAndReturnsValueToLocal() {
FunctionDOS function =
environment.createFunction(
new Symbol[] {},
new OpCode[] {
new OpCode.CreateValueObject(1234),
new OpCode.PushSymbol(local),
new OpCode.Push(Symbol.RESULT),
new OpCode.FunctionCall(Symbol.SET_SLOT_$_TO_$),
new OpCode.PushSymbol(local),
new OpCode.FunctionCall(Symbol.GET_SLOT_$)
});
return function;
}
// @Test
// public void shouldSetSlotInParentContextIfDefinedThere() {
// ObjectDOS parentContext = interpreter.newContext();
// parentContext.setSlot(local, interpreter.getEnvironment().createNewObject());
//
// context.setContext(parentContext);
//
// arguments.add(new SymbolWrapper(local));
// arguments.add(object);
// context.getFunction(Symbol.SET_SLOT_$_TO_$).execute(context, arguments);
//
// assertThat(parentContext.getSlot(local), is(object));
// assertThat(context.getSlot(local), is(object)); // goes up to parent...
// }
}
public static Node singleton(String tag, SEXP value) {
return singleton(Symbol.get(tag), value);
}
public class SubstituteFunction extends SpecialFunction {
private static final Symbol EXPR_ARGUMENT = Symbol.get("expr");
private static final Symbol ENV_ARGUMENT = Symbol.get("env");
private final PairList formals;
public SubstituteFunction() {
super("substitute");
this.formals =
new PairList.Builder()
.add(EXPR_ARGUMENT, Symbol.MISSING_ARG)
.add(ENV_ARGUMENT, Symbol.MISSING_ARG)
.build();
}
@Override
public SEXP apply(Context context, Environment rho, FunctionCall call, PairList args) {
PairList matchedArguments = ClosureDispatcher.matchArguments(formals, args);
SEXP exprArgument = matchedArguments.findByTag(EXPR_ARGUMENT);
SEXP envArgument = matchedArguments.findByTag(ENV_ARGUMENT);
// Substitute handles ... in an idiosyncratic way:
// Only the first argument is used, and there is no attempt to
// match subsequent arguments against the 'env' argument.
SEXP expr;
if (exprArgument == Symbols.ELLIPSES) {
SEXP ellipses = rho.getVariable(Symbols.ELLIPSES);
if (ellipses == Null.INSTANCE) {
expr = Null.INSTANCE;
} else {
PromisePairList.Node promisePairList = (PromisePairList.Node) ellipses;
Promise promisedArg = (Promise) promisePairList.getValue();
expr = promisedArg.getExpression();
}
} else {
expr = exprArgument;
}
return substitute(expr, buildContext(context, rho, envArgument));
}
private static SubstituteContext buildContext(Context context, Environment rho, SEXP argument) {
if (argument == Symbol.MISSING_ARG) {
return buildContext(context, rho);
}
SEXP env = context.evaluate(argument, rho);
return buildContext(context, env);
}
private static SubstituteContext buildContext(Context context, SEXP evaluatedEnv) {
if (evaluatedEnv instanceof Environment) {
if (context.getGlobalEnvironment() == evaluatedEnv) {
return new GlobalEnvironmentContext();
} else {
return new EnvironmentContext((Environment) evaluatedEnv);
}
} else if (evaluatedEnv instanceof ListVector) {
return new ListContext((ListVector) evaluatedEnv);
} else if (evaluatedEnv instanceof PairList) {
return new PairListContext((PairList) evaluatedEnv);
} else {
throw new EvalException(
"Cannot substitute using environment of type %s: expected list, pairlist, or environment",
evaluatedEnv.getTypeName());
}
}
public static SEXP substitute(Context context, SEXP exp, SEXP environment) {
return substitute(exp, buildContext(context, environment));
}
private static SEXP substitute(SEXP exp, SubstituteContext context) {
SubstitutingVisitor visitor = new SubstitutingVisitor(context);
exp.accept(visitor);
return visitor.getResult();
}
public static class SubstitutingVisitor extends SexpVisitor<SEXP> {
private final SubstituteContext context;
private SEXP result;
public SubstitutingVisitor(SubstituteContext context) {
this.context = context;
}
@Override
public void visit(FunctionCall call) {
result =
new FunctionCall(
substitute(call.getFunction()),
substituteArgumentList(call.getArguments()),
call.getAttributes());
}
private PairList substituteArgumentList(PairList arguments) {
PairList.Builder builder = PairList.Node.newBuilder();
for (PairList.Node node : arguments.nodes()) {
if (node.getValue().equals(Symbols.ELLIPSES)) {
SEXP extraArguments = context.getVariable(Symbols.ELLIPSES);
if (extraArguments != Symbol.UNBOUND_VALUE) {
builder.addAll(unpackPromiseList((PromisePairList) extraArguments));
} else {
builder.add(Symbols.ELLIPSES);
}
} else {
builder.add(node.getRawTag(), substitute(node.getValue()));
}
}
return builder.build();
}
@Override
public void visit(PairList.Node pairList) {
PairList.Builder builder = PairList.Node.newBuilder();
for (PairList.Node node : pairList.nodes()) {
builder.add(node.getRawTag(), substitute(node.getValue()));
}
result = builder.build();
}
@Override
public void visit(ListVector list) {
ListVector.Builder builder = ListVector.newBuilder();
for (SEXP exp : list) {
builder.add(substitute(exp));
}
builder.copyAttributesFrom(list);
result = builder.build();
}
@Override
public void visit(ExpressionVector vector) {
List<SEXP> list = Lists.newArrayList();
for (SEXP exp : vector) {
list.add(substitute(exp));
}
result = new ExpressionVector(list, vector.getAttributes());
}
@Override
public void visit(Symbol symbol) {
if (context.hasVariable(symbol)) {
result = unpromise(context.getVariable(symbol));
} else {
result = symbol;
}
}
private PairList unpackPromiseList(PromisePairList dotExp) {
PairList.Builder unpacked = new PairList.Node.Builder();
for (PairList.Node node : dotExp.nodes()) {
unpacked.add(node.getRawTag(), unpromise(node.getValue()));
}
return unpacked.build();
}
private SEXP unpromise(SEXP value) {
while (value instanceof Promise) {
value = ((Promise) value).getExpression();
}
return value;
}
@Override
public void visit(PromisePairList dotExp) {
super.visit(dotExp);
}
@Override
protected void unhandled(SEXP exp) {
result = exp;
}
@Override
public SEXP getResult() {
return result;
}
private SEXP substitute(SEXP exp) {
return SubstituteFunction.substitute(exp, context);
}
}
private interface SubstituteContext {
SEXP getVariable(Symbol name);
boolean hasVariable(Symbol name);
}
private static class EnvironmentContext implements SubstituteContext {
private final Environment rho;
public EnvironmentContext(Environment rho) {
super();
this.rho = rho;
}
@Override
public SEXP getVariable(Symbol name) {
return rho.getVariable(name);
}
@Override
public boolean hasVariable(Symbol name) {
return rho.hasVariable(name);
}
}
private static class GlobalEnvironmentContext implements SubstituteContext {
@Override
public SEXP getVariable(Symbol name) {
return Symbol.UNBOUND_VALUE;
}
@Override
public boolean hasVariable(Symbol name) {
return false;
}
}
private static class ListContext implements SubstituteContext {
private ListVector list;
public ListContext(ListVector list) {
this.list = list;
}
@Override
public SEXP getVariable(Symbol name) {
int index = list.getIndexByName(name.getPrintName());
if (index == -1) {
return Symbol.UNBOUND_VALUE;
} else {
return list.getElementAsSEXP(index);
}
}
@Override
public boolean hasVariable(Symbol name) {
return list.getIndexByName(name.getPrintName()) != -1;
}
}
private static class PairListContext implements SubstituteContext {
private PairList list;
public PairListContext(PairList list) {
this.list = list;
}
@Override
public SEXP getVariable(Symbol name) {
for (PairList.Node node : list.nodes()) {
if (node.getTag() == name) {
return node.getValue();
}
}
return Symbol.UNBOUND_VALUE;
}
@Override
public boolean hasVariable(Symbol name) {
return getVariable(name) != Symbol.UNBOUND_VALUE;
}
}
}