public Param getColunitSmallMolecule(SmallMoleculeTableField column)
throws MzTabParsingException {
if (column == SmallMoleculeTableField.ABUNDANCE
|| column == SmallMoleculeTableField.ABUNDANCE_STD
|| column == SmallMoleculeTableField.ABUNDANCE_STD_ERROR) {
throw new MzTabParsingException(
"The colunit field cannot be used to store units for abundance columns. Please use getSmallMoleculeQuantificationUnit");
}
if (column == SmallMoleculeTableField.CUSTOM) {
throw new MzTabParsingException(
"This function cannot be used to retrieve units for optional columns");
}
return getColunitSmallMolecule(column.toString());
}
public void setColunitSmallMolecule(SmallMoleculeTableField column, Param unit)
throws MzTabParsingException {
if (column == SmallMoleculeTableField.ABUNDANCE
|| column == SmallMoleculeTableField.ABUNDANCE_STD
|| column == SmallMoleculeTableField.ABUNDANCE_STD_ERROR) {
throw new MzTabParsingException("Colunits must not be set for columns specifying abundance.");
}
if (column == SmallMoleculeTableField.CUSTOM) {
throw new MzTabParsingException("This function cannot be used to set custom column units.");
}
if (column == SmallMoleculeTableField.ROW_PREFIX
|| column == SmallMoleculeTableField.HEADER_PREFIX) {
throw new MzTabParsingException("ROW_PREFIX and HEADER_PREFIX are not valid columns.");
}
setColunitPeptide(column.toString(), unit);
}
