protected boolean getUserVisible(OWLOntology o, OWLEntity owlEntity) {
String val =
getAnnotationValueByUri(
o, owlEntity, OntologyLumifyProperties.USER_VISIBLE.getPropertyName());
return val == null || Boolean.parseBoolean(val);
}
protected Concept importOntologyClass(
OWLOntology o, OWLClass ontologyClass, File inDir, Authorizations authorizations)
throws IOException {
String uri = ontologyClass.getIRI().toString();
if ("http://www.w3.org/2002/07/owl#Thing".equals(uri)) {
return getEntityConcept();
}
String label = getLabel(o, ontologyClass);
checkNotNull(label, "label cannot be null or empty: " + uri);
LOGGER.info("Importing ontology class " + uri + " (label: " + label + ")");
Concept parent = getParentConcept(o, ontologyClass, inDir, authorizations);
Concept result = getOrCreateConcept(parent, uri, label);
String color = getColor(o, ontologyClass);
if (color != null) {
result.setProperty(
OntologyLumifyProperties.COLOR.getPropertyName(),
color,
OntologyRepository.VISIBILITY.getVisibility(),
authorizations);
}
String displayType = getDisplayType(o, ontologyClass);
if (displayType != null) {
result.setProperty(
OntologyLumifyProperties.DISPLAY_TYPE.getPropertyName(),
displayType,
OntologyRepository.VISIBILITY.getVisibility(),
authorizations);
}
String titleFormula = getTitleFormula(o, ontologyClass);
if (titleFormula != null) {
result.setProperty(
OntologyLumifyProperties.TITLE_FORMULA.getPropertyName(),
titleFormula,
OntologyRepository.VISIBILITY.getVisibility(),
authorizations);
}
String subtitleFormula = getSubtitleFormula(o, ontologyClass);
if (subtitleFormula != null) {
result.setProperty(
OntologyLumifyProperties.SUBTITLE_FORMULA.getPropertyName(),
subtitleFormula,
OntologyRepository.VISIBILITY.getVisibility(),
authorizations);
}
String timeFormula = getTimeFormula(o, ontologyClass);
if (timeFormula != null) {
result.setProperty(
OntologyLumifyProperties.TIME_FORMULA.getPropertyName(),
timeFormula,
OntologyRepository.VISIBILITY.getVisibility(),
authorizations);
}
boolean userVisible = getUserVisible(o, ontologyClass);
result.setProperty(
OntologyLumifyProperties.USER_VISIBLE.getPropertyName(),
userVisible,
OntologyRepository.VISIBILITY.getVisibility(),
authorizations);
String glyphIconFileName = getGlyphIconFileName(o, ontologyClass);
setIconProperty(
result,
inDir,
glyphIconFileName,
LumifyProperties.GLYPH_ICON.getPropertyName(),
authorizations);
String mapGlyphIconFileName = getMapGlyphIconFileName(o, ontologyClass);
setIconProperty(
result,
inDir,
mapGlyphIconFileName,
LumifyProperties.MAP_GLYPH_ICON.getPropertyName(),
authorizations);
return result;
}