public Path getReversed() {
return new Path(
getReversedEdges(),
score,
MassUtil.convertIonsType(beginMass + getMass(), spectrum.parentMass),
spectrum,
!reversed);
}
public boolean isMonoTag() {
if (isMonoTag != null) {
return isMonoTag;
}
Edge[] edges = getEdges();
Edge[] reversedEdges = getReversedEdges();
isMonoTag =
spectrumHasPeaks(beginMass, edges, 1.)
|| spectrumHasPeaks(
MassUtil.convertIonsType(beginMass + getMass(), spectrum.parentMass), edges, -1.);
isMonoTag |=
spectrumHasPeaks(beginMass, reversedEdges, 1.)
|| spectrumHasPeaks(
MassUtil.convertIonsType(beginMass + getMass(), spectrum.parentMass),
reversedEdges,
-1.);
return isMonoTag;
}
