@Override
public void fillModelFromDialog(Object model) {
if (compareOnRadio.isSelected()) {
TagDocument[] tags = new TagDocument[2];
int cnt = 0;
for (int i=0; i<checkBoxes.length; i++) {
if (checkBoxes[i].isSelected()) {
if (cnt > 1) {
throw new SanityCheckException("More than 2 tags selected");
}
tags[cnt] = tagDocuments[i];
cnt++;
}
}
if (cnt == 2) {
signalView.setComparedTags(tags[0], tags[1]);
} else {
signalView.setComparedTags(null, null);
}
} else {
signalView.setComparedTags(null, null);
}
}
@Override
public void fillDialogFromModel(Object model) throws SignalMLException {
TagDocument[] comparedDocuments = signalView.getComparedTags();
if (comparedDocuments == null) {
compareOffRadio.setSelected(true);
} else {
for (int i=0; i<tagDocuments.length; i++) {
if (tagDocuments[i] == comparedDocuments[0] || tagDocuments[i] == comparedDocuments[1]) {
checkBoxes[i].setSelected(true); // any deselection is handled by coordinator
}
}
compareOnRadio.setSelected(true);
}
}
public void calculate() throws SignalMLException {
this.setStyledTagSet(tagDocument != null ? tagDocument.getTagSet() : null);
SignalSpace signalSpace = getParameters().getSignalSpace();
MultichannelSampleSource sampleSource;
if (signalDocument.getDocumentView() != null) {
SignalView signalView = (SignalView) signalDocument.getDocumentView();
SignalProcessingChain signalChain = signalView.getMasterPlot().getSignalChain();
sampleSource = signalChain.createLevelCopyChain(signalSpace.getSignalSourceLevel());
} else {
sampleSource = signalDocument.getSampleSource();
}
List<String> artifactTagStyleNames = new ArrayList<String>();
for (TagStyleGroup styleGroup : getParameters().getArtifactTagStyles()) {
artifactTagStyleNames.addAll(styleGroup.getTagStyleNames());
}
List<MarkerSegmentedSampleSource> averagedSampleSources =
new ArrayList<MarkerSegmentedSampleSource>();
List<MarkerSegmentedSampleSource> baselineSampleSources =
new ArrayList<MarkerSegmentedSampleSource>();
for (TagStyleGroup tagStyleGroup : getParameters().getAveragedTagStyles()) {
List<String> styleNames = tagStyleGroup.getTagStyleNames();
Double startAveragingTime = null, endAveragingTime = null;
if (signalSpace.getTimeSpaceType() == TimeSpaceType.SELECTION_BASED) {
startAveragingTime = signalSpace.getSelectionTimeSpace().getPosition();
endAveragingTime = startAveragingTime + signalSpace.getSelectionTimeSpace().getLength();
}
MarkerSegmentedSampleSource segmentedSampleSource =
new MarkerSegmentedSampleSource(
sampleSource,
startAveragingTime,
endAveragingTime,
getStyledTagSet(),
styleNames,
artifactTagStyleNames,
getParameters().getAveragingStartTime(),
getParameters().getAveragingTimeLength(),
signalSpace.getChannelSpace());
MarkerSegmentedSampleSource baselineSampleSource =
new MarkerSegmentedSampleSource(
sampleSource,
startAveragingTime,
endAveragingTime,
getStyledTagSet(),
styleNames,
artifactTagStyleNames,
getParameters().getBaselineTimeStart(),
getParameters().getBaselineTimeLength(),
signalSpace.getChannelSpace());
averagedSampleSources.add(segmentedSampleSource);
baselineSampleSources.add(baselineSampleSource);
}
setSampleSource(averagedSampleSources);
setBaselineSampleSources(baselineSampleSources);
}
@Override
public JComponent createInterface() {
List<TagDocument> tags = signalView.getDocument().getTagDocuments();
int cnt = tags.size();
if (cnt < 2) {
throw new SanityCheckException("Too few tag documents");
}
tagDocuments = new TagDocument[cnt];
tags.toArray(tagDocuments);
analyzeAction = new AnalyzeAction();
JPanel graphicalComparePanel = new JPanel();
graphicalComparePanel.setLayout(new BoxLayout(graphicalComparePanel, BoxLayout.Y_AXIS));
graphicalComparePanel.setBorder(new CompoundBorder(
new TitledCrossBorder(_("Graphical comparison"), true),
new EmptyBorder(3,3,3,3)
));
compareOnRadio = new JRadioButton(_("Comparison mode enabled"));
compareOffRadio = new JRadioButton(_("Comparison mode disabled"));
ButtonGroup compareGroup = new ButtonGroup();
compareGroup.add(compareOffRadio);
compareGroup.add(compareOnRadio);
compareOnRadio.addItemListener(new ItemListener() {
@Override
public void itemStateChanged(ItemEvent e) {
fillModelFromDialog(getCurrentModel());
}
});
graphicalComparePanel.add(compareOffRadio);
graphicalComparePanel.add(compareOnRadio);
JPanel chooseTagsPanel = new JPanel();
chooseTagsPanel.setLayout(new GridLayout(cnt, 1, 3, 3));
chooseTagsPanel.setBorder(new CompoundBorder(
new TitledBorder(_("Choose tag documents (2 required)")),
new EmptyBorder(3,3,3,3)
));
checkBoxes = new JCheckBox[cnt];
CheckBoxCoordinator checkBoxCoordinator = new CheckBoxCoordinator();
for (int i=0; i<cnt; i++) {
final String message;
if (tagDocuments[i].getBackingFile() == null) {
message = _R("New tag {0}", tagDocuments[i].getName());
} else {
message = tagDocuments[i].getName();
}
checkBoxes[i] = new JCheckBox(message);
chooseTagsPanel.add(checkBoxes[i]);
checkBoxes[i].addItemListener(checkBoxCoordinator);
}
checkBoxes[0].setSelected(true);
checkBoxes[1].setSelected(true);
JPanel buttonPanel = new JPanel(new BorderLayout());
buttonPanel.setBorder(new EmptyBorder(3,0,0,0));
analyzeButton = new JButton(analyzeAction);
buttonPanel.add(analyzeButton, BorderLayout.CENTER);
JPanel interfacePanel = new JPanel(new BorderLayout());
interfacePanel.add(graphicalComparePanel, BorderLayout.NORTH);
interfacePanel.add(chooseTagsPanel, BorderLayout.CENTER);
interfacePanel.add(buttonPanel, BorderLayout.SOUTH);
Dimension size = chooseTagsPanel.getPreferredSize();
if (size.width < 270) {
size.width = 270;
}
chooseTagsPanel.setPreferredSize(size);
return interfacePanel;
}