/**
* @see org.openmrs.logic.Rule#eval(org.openmrs.logic.LogicContext, java.lang.Integer,
* java.util.Map)
*/
public Result eval(LogicContext context, Integer patientId, Map<String, Object> parameters)
throws LogicException {
Integer index = null;
List<Result> results = null;
Result distinctResult = null;
if (parameters != null) {
Object param1Obj = parameters.get("param1");
if (param1Obj != null) {
index = Integer.parseInt((String) param1Obj);
}
results = (List<Result>) parameters.get("param2");
}
if (index != null && results != null && index < results.toArray().length) {
// Sort the results by date
Collections.sort(results, new ResultDateComparator());
// Reverse the list
Collections.reverse(results);
distinctResult = (Result) results.toArray()[index];
}
if (distinctResult == null) {
distinctResult = new Result();
}
if (distinctResult.toString() == null) {
distinctResult.setValueText(String.valueOf(distinctResult.toNumber()));
}
return distinctResult;
}
/**
* @return string representation of the result. For non-text results, this will either be the
* overridden text value (if specifically defined) or a string representation of the default
* datatype value. If the result is a list, then the string representation of all members a
* joined with commas.
*/
public String toString() {
if (isSingleResult()) {
if (datatype == null) {
return valueText == null ? "" : valueText;
}
switch (datatype) {
case BOOLEAN:
return (valueBoolean ? "true" : "false");
case CODED:
return (valueCoded == null ? "" : valueCoded.getBestName(Context.getLocale()).getName());
case DATETIME:
return (valueDatetime == null ? "" : Context.getDateFormat().format(valueDatetime));
case NUMERIC:
return (valueNumeric == null ? "" : String.valueOf(valueNumeric));
case TEXT:
return (valueText == null ? "" : valueText);
default:
return valueText;
}
}
StringBuffer s = new StringBuffer();
for (Result r : this) {
if (s.length() > 0) {
s.append(",");
}
s.append(r.toString());
}
return s.toString();
}
/**
* @return boolean representation of the result. For non-boolean results, this will either be the
* overridden boolean value (if specifically defined) or a boolean representation of the
* default datatype. If the result is a list, then return false only if all members are false
* <table>
* <th>
* <td>Datatype</td>
* <td>Returns</td></th>
* <tr>
* <td>CODED</td>
* <td>false for concept FALSE<br>
* true for all others</td>
* </tr>
* <tr>
* <td>DATETIME</td>
* <td>true for any date value<br>
* false if the date is null</td>
* </tr>
* <tr>
* <td>NUMERIC</td>
* <td>true for any non-zero number<br>
* false for zero</td>
* </tr>
* <tr>
* <td>TEXT</td>
* <td>true for any non-blank value<br>
* false if blank or null</td>
* </tr>
* </table>
*/
public Boolean toBoolean() {
if (isSingleResult()) {
if (datatype == null) {
return valueBoolean;
}
switch (datatype) {
case BOOLEAN:
return (valueBoolean == null ? false : valueBoolean);
case CODED:
return (valueCoded == null ? false : true); // TODO: return
// false for "FALSE"
// concept
case DATETIME:
return (valueDatetime == null ? false : true);
case NUMERIC:
return (valueNumeric == null || valueNumeric == 0 ? false : true);
case TEXT:
return (valueText == null || valueText.length() < 1 ? false : true);
default:
return valueBoolean;
}
}
for (Result r : this) {
if (!r.toBoolean()) {
return false;
}
}
return true;
}
/**
* @return true if the result is equal to the given result or is a list containing a member equal
* to the given result
*/
public boolean contains(Result result) {
if (isSingleResult()) {
return this.equals(result);
}
for (Result r : this) {
if (r.contains(result)) {
return true;
}
}
return false;
}
/**
* @return true if result contains a coded value with the given concept id (if the result is a
* list, then returns true if <em>any</em> member has a matching coded value)
*/
public boolean containsConcept(Integer conceptId) {
if (isSingleResult()) {
return (valueCoded != null && valueCoded.getConceptId().equals(conceptId));
}
for (Result r : this) {
if (r.containsConcept(conceptId)) {
return true;
}
}
return false;
}
/** @return true if the result has any non-zero, non-empty value */
public boolean exists() {
if (isSingleResult()) {
return ((valueBoolean != null && valueBoolean)
|| valueCoded != null
|| valueDatetime != null
|| (valueNumeric != null && valueNumeric != 0)
|| (valueText != null && valueText.length() > 0));
}
for (Result r : this) {
if (r.exists()) {
return true;
}
}
return false;
}
/**
* Limits results by a given encounter id
*
* @see org.openmrs.logic.Rule#eval(org.openmrs.logic.LogicContext, org.openmrs.Patient,
* java.util.Map)
*/
public Result eval(LogicContext context, Integer patientId, Map<String, Object> parameters)
throws LogicException {
if (parameters == null) {
return Result.emptyResult();
}
String conceptName = (String) parameters.get("param1");
if (conceptName == null) {
return Result.emptyResult();
}
Result ruleResult = null;
Integer encounterId = (Integer) parameters.get("encounterId");
if (encounterId == null) {
return Result.emptyResult();
}
LogicCriteria conceptCriteria = new LogicCriteriaImpl(conceptName);
LogicCriteria fullCriteria = null;
LogicCriteria encounterCriteria =
new LogicCriteriaImpl("encounterId").equalTo(encounterId.intValue());
fullCriteria = conceptCriteria.and(encounterCriteria);
ruleResult = context.read(patientId, context.getLogicDataSource("obs"), fullCriteria.last());
if (ruleResult != null && ruleResult.size() > 0) {
return ruleResult.get(0);
}
return Result.emptyResult();
}
/** @return all results greater than the given value */
public Result gt(Integer value) {
if (isSingleResult()) {
if (valueNumeric == null || valueNumeric <= value) {
return emptyResult;
}
return this;
}
List<Result> matches = new ArrayList<Result>();
for (Result r : this) {
if (!r.gt(value).isEmpty()) {
matches.add(r);
}
}
if (matches.size() < 1) {
return emptyResult;
}
return new Result(matches);
}
/** @see java.lang.Object#equals(java.lang.Object) */
@Override
public boolean equals(Object obj) {
if (obj == null || !(obj instanceof Result)) {
return false;
}
Result r = (Result) obj;
if (EmptyResult.class.isAssignableFrom(r.getClass()) && this.isEmpty()) {
return true;
}
if (EmptyResult.class.isAssignableFrom(this.getClass()) && r.isEmpty()) {
return true;
}
if (isSingleResult() && r.isSingleResult()) {
if (datatype == null) {
return false;
}
// both are single results
switch (datatype) {
case BOOLEAN:
return (valueBoolean.equals(r.valueBoolean));
case CODED:
return (valueCoded.equals(r.valueCoded));
case DATETIME:
return (valueDatetime.equals(r.valueDatetime));
case NUMERIC:
return (valueNumeric.equals(r.valueNumeric));
case TEXT:
return (valueText.equals(r.valueText));
default:
return false;
}
}
if (isSingleResult() || r.isSingleResult()) {
// we already know they're not both single results, so if one is
// single, it's not a match
return false;
}
if (this.size() != r.size()) {
return false;
}
// at this point, we have two results that are lists, so members must
// match exactly
for (int i = 0; i < this.size(); i++) {
if (!this.get(i).equals(r.get(i))) {
return false;
}
}
return true;
}
/**
* @return the chronologically (based on result date) last result
* @should get the most recent result given multiple results
* @should get the result given a single result
* @should get an empty result given an empty result
* @should get the result with null result date
*/
public Result latest() {
if (isSingleResult()) {
return this;
}
Result last = emptyResult();
// default the returned result to the first item
// in case all resultDates are null
if (size() > 0) {
last = get(0);
}
for (Result r : this) {
if ((last.getResultDate() == null
|| (r.getResultDate() != null && r.getResultDate().after(last.getResultDate())))) {
last = r;
}
}
return last;
}
/**
* @return the chronologically (based on result date) first result
* @should get the first result given multiple results
* @should get the result given a single result
* @should get an empty result given an empty result
* @should not get the result with null result date given other results
* @should get one result with null result dates for all results
*/
public Result earliest() {
if (isSingleResult()) {
return this;
}
Result first = emptyResult();
// default the returned result to the first item
// in case all resultDates are null
if (size() > 0) {
first = get(0);
}
for (Result r : this) {
if (r != null
&& r.getResultDate() != null
&& (first.getResultDate() == null || r.getResultDate().before(first.getResultDate()))) {
first = r;
}
}
return first;
}
/** TODO make this test use assert statements instead of printing to stdout */
@Test
public void shouldObservationRule() {
LogicService logicService = Context.getLogicService();
Cohort patients = new Cohort();
Map<Integer, Result> result = null;
patients.addMember(2);
try {
Result r = logicService.eval(2, new LogicCriteriaImpl("CD4 COUNT"));
Assert.assertNotNull(r);
Assert.assertEquals(0, r.size());
result = logicService.eval(patients, new LogicCriteriaImpl("CD4 COUNT"));
Assert.assertNotNull(result);
result = logicService.eval(patients, new LogicCriteriaImpl("CD4 COUNT").lt(170));
Assert.assertNotNull(result);
result = logicService.eval(patients, new LogicCriteriaImpl("CD4 COUNT").gt(185));
Assert.assertNotNull(result);
result = logicService.eval(patients, new LogicCriteriaImpl("CD4 COUNT").equalTo(190));
Assert.assertNotNull(result);
Calendar cal = Calendar.getInstance();
cal.set(2006, 3, 11);
result =
logicService.eval(patients, new LogicCriteriaImpl("CD4 COUNT").before(cal.getTime()));
Assert.assertNotNull(result);
result =
logicService.eval(
patients, new LogicCriteriaImpl("CD4 COUNT").lt(190).before(cal.getTime()));
Assert.assertNotNull(result);
result = logicService.eval(patients, new LogicCriteriaImpl("CD4 COUNT").after(cal.getTime()));
Assert.assertNotNull(result);
result = logicService.eval(patients, new LogicCriteriaImpl("CD4 COUNT").last());
Assert.assertNotNull(result);
result =
logicService.eval(
patients, new LogicCriteriaImpl("CD4 COUNT").last().before(cal.getTime()));
Assert.assertNotNull(result);
result = logicService.eval(patients, new LogicCriteriaImpl("CD4 COUNT").not().lt(150));
Assert.assertNotNull(result);
result = logicService.eval(patients, new LogicCriteriaImpl("CD4 COUNT").not().not().lt(150));
Assert.assertNotNull(result);
patients.addMember(2);
patients.addMember(3);
result = logicService.eval(patients, new LogicCriteriaImpl("CD4 COUNT").lt(200));
Assert.assertNotNull(result);
patients.addMember(39);
result =
logicService.eval(
patients,
new LogicCriteriaImpl("PROBLEM ADDED").contains("HUMAN IMMUNODEFICIENCY VIRUS"));
Assert.assertNotNull(result);
result = logicService.eval(patients, new LogicCriteriaImpl("CD4 COUNT"));
Assert.assertNotNull(result);
result =
logicService.eval(
patients, new LogicCriteriaImpl("CD4 COUNT").within(Duration.months(1)));
Assert.assertNotNull(result);
} catch (LogicException e) {
log.error("testObservationRule: Error generated", e);
}
}